Caenorhabditis remanei (nematode): GCK72_015516
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Entry
GCK72_015516 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K14004
protein transport protein SEC13
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03013
Nucleocytoplasmic transport
crq04141
Protein processing in endoplasmic reticulum
crq04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GCK72_015516
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
GCK72_015516
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
GCK72_015516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crq03019
]
GCK72_015516
04131 Membrane trafficking [BR:
crq04131
]
GCK72_015516
Messenger RNA biogenesis [BR:
crq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
GCK72_015516
Membrane trafficking [BR:
crq04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
GCK72_015516
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
GCK72_015516
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
GCK72_015516
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_Gbeta
WDR55
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
9811680
NCBI-ProteinID:
XP_053585704
LinkDB
All DBs
Position
IV
Genome browser
AA seq
315 aa
AA seq
DB search
MTTIRQRIDTQHRDAIHDAQLNIYGNRLATCGSDRLVKIFEVRPNGQSYPLIELSGHNGP
VWKVSWAHPKYGGLLASAAYDKKVIIWQEINGRWQKSYEWACHEASTTSVAFAPHQYGLW
LASSSADGDIGILRYDSVTGQWQSSKIQKCHEQGVNSVSWAPGSADPTAKKRLVSAGNDK
CAKIWVLNESTNEWILEKTLNGHTDFVREAAWCPVTNKGQHSIVSCGLEGNLVLYRNSNI
ETDEWKSKLLEKSPCPLYHASFSPCGSFLSVSGDDNMITIWRENLQGQWIKVPRENKERE
GMTASQGGQSNGSQR
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaccacaattcgccagagaatcgatacccaacatcgtgatgccattcacgacgctcaa
ctcaacatctacggaaatcgacttgccacgtgtggatccgatcgtcttgtcaagattttt
gaggtccgcccaaacggtcaatcgtatccactaatcgaactatccggacacaatggacca
gtatggaaagtatcatgggctcatccaaaatacggtggacttcttgcatcggctgcttat
gataaaaaagtgataatctggcaagaaatcaatggccgctggcagaaatcgtacgaatgg
gcgtgtcatgaggcgtcgacgacttccgtcgcattcgcccctcatcaatacggtctctgg
ttggcttcatcgtcagccgacggtgatatcggaattcttcgttacgattcagtcaccgga
caatggcaatcgtcgaaaatccagaaatgtcacgaacagggagtgaattctgtctcatgg
gcacccggaagtgctgatccgacggcgaagaagcgtctcgtgtcggctggaaacgataaa
tgtgcaaagatttgggttttaaacgagtcgacaaacgaatggattctggagaaaactctc
aacggacacacagatttcgtccgtgaggcggcatggtgtccagtgacaaacaaaggacaa
cattcgatcgtttcgtgtggtttggagggaaatctcgttttgtaccgtaattcgaatatc
gaaaccgacgaatggaagtcgaaattgttggagaaatcgccgtgtccactgtatcacgct
tcgttctcaccgtgtggatcgtttttgtccgtttctggtgatgataatatgatcacaatt
tggcgtgaaaacttgcaaggacaatggataaaagtgccacgagagaataaagaaagagag
ggaatgacggcgtcgcaaggaggacaatccaacggatcacagagatag
DBGET
integrated database retrieval system