Caenorhabditis remanei (nematode): GCK72_015730
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Entry
GCK72_015730 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K13091
RNA-binding protein 23/39
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crq03041
]
GCK72_015730
Spliceosome [BR:
crq03041
]
Common components
Common spliceosomal components
General mRNP proteins
GCK72_015730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RRM_5
RRM_PARP14_3
RRM_3
Motif
Other DBs
NCBI-GeneID:
9817180
NCBI-ProteinID:
XP_053585865
UniProt:
A0A6A5GXA9
LinkDB
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Position
IV:22112321..22120491
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AA seq
577 aa
AA seq
DB search
MDGALDVDAMLDGAMDAAMEEKDQNRQKSSPSRSNRSRSRSPSRRSGRSRSRSRDRRRSR
SRDRGDRRRSRSRSRDRRRRRSTSRDRRRSRSRDRGAYRRRSRTRSRDRRRSPPRRRRSP
PRRSPRRSPPRGRLPGPERRDVMPFNPRHSPPKNAKLELSPEERDQRTLLIMQIARDTRP
RDLEEFFSSVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGLALNGQRLMGAPLQIQ
RTCAERNRAANSSMASTLGFVAPGAAKGPAHVLVENLHPKITENMIREIFESFGRIEKLE
MEKLSNGDNRETAVIVFRNADEAQKSIEQLNNFELAGRQIRLSIKQDAPPPPQIKKEEAS
IHQRSLDDIGDRQGFSLGAGGRQQLMAKLAQGTGSGMELTASAQMAAQHAGNSQIPSIAT
QCFLLSNMFDPSKETEPAWDHDIREDVIEQCAQHGGALHVFVDKGSEQGNVYVKCPSIAI
AHQAVSALHGRWFSGKVITANYVPVNSYHDLFPDAVAARVPLNTRIAAAAGIQMMQVPVM
VAPGGGVPANGYSSYGMMSATGAIPPQSSQAPYGGYY
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggacggagcgctagatgtcgacgcaatgctcgacggggcgatggacgccgcaatggag
gaaaaagatcaaaatcgtcagaaatcatcgccaagtcgttcaaatcgctcgagatcgcgt
tcaccgagccgtagatcaggaagaagccgctcgcggagccgagatcgacgtcgcagccgt
tcgagggatcgtggcgatcgtcggagatccagaagtcgtagtcgtgaccgtcggagacgt
cgttcgacgagtcgagaccgtcgccggagccgttcgagggatcgtggagcgtatagacga
cgatcgagaacccgttccagagatcgtcgccgttcaccaccacgaagacgtcgttcgccg
ccaagaagatcaccgagaagaagtccaccgagaggccgccttccgggaccagaacgtcgc
gatgtgatgccattcaacccccgtcattctccaccaaaaaatgcgaaactcgagttatca
ccagaagaaagagatcaacgaacccttctaatcatgcaaatcgcccgggatactcgtccc
cgtgatctcgaagagttcttctcttcagtaggcgccgttcgtgacgtcagaatcataacg
gattcacggacgggacgatcgaaaggaatctgttatgtggaattctgggatgaggaatca
gtgccgttgggtctggcgttgaacggacagcggcttatgggcgccccgttgcaaattcaa
agaacttgcgctgagagaaatcgagcggcgaattcgtcaatggcttccaccttgggattt
gtggctcctggagcagcgaaaggccccgcccacgtacttgtcgagaatttgcatccgaag
attacggagaatatgattcgagagattttcgaatcgtttggacgaattgagaagttggaa
atggagaagttgtcgaatggagataatagggagaccgcggttattgtgttccgaaacgcg
gacgaagcacaaaaatcaatcgaacaactcaacaatttcgaactcgccggtcgacaaatc
cgtctttccatcaaacaggacgccccgccccctccacaaatcaaaaaggaagaagcttca
atccatcaaagatctctcgacgacatcggtgatcgtcaaggcttctcactaggcgccggc
ggtcgtcaacagttgatggcaaagttggctcaaggcacgggctccggtatggagctcacg
gcgtcggctcaaatggccgcacagcacgctggaaactctcaaattccatcgatagctact
caatgtttccttctatcgaatatgttcgatccgagtaaagaaacggagccagcgtgggat
cacgatattcgagaagacgtcattgaacagtgtgctcaacacggtggagccctccacgta
ttcgtcgataagggctcagaacagggaaatgtctatgtgaagtgcccgtcgatagcgatc
gcacatcaggcggtgtcggcgttacacgggcggtggtttagtggaaaagtgatcacggcg
aattatgttccggtgaactcgtatcacgacttgtttcccgatgcggttgctgcgagggtt
ccgttgaatacgagaattgcggccgctgcggggattcaaatgatgcaggtgccggttatg
gtcgcgcccggaggaggggtaccggctaatggctactcgtcgtacggaatgatgtcagcg
accggagcaattccaccacaatcatcacaggctccgtacggtggatactactag
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