Caenorhabditis remanei (nematode): GCK72_015753
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Entry
GCK72_015753 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crq03016
]
GCK72_015753
Enzymes [BR:
crq01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
GCK72_015753
Transfer RNA biogenesis [BR:
crq03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
GCK72_015753
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
9797981
NCBI-ProteinID:
XP_003091201
UniProt:
A0A6A5GXG4
E3NK68
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All DBs
Position
IV:complement(22349804..22350997)
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AA seq
119 aa
AA seq
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MSTTSSGEIQKTSLEIHEIPFEDTKEFRTKRLVVRDFWKRGYYIADGTRFGGDYLVYTRS
PNECHAEFVLLCTPITDSQRISAMRCCNQVKKCLILATTSPDSTQPHYTKCEWFRPEMF
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgacgtcatctggagagattcagaagacgtcgttggagattcacgagattccg
tttgaggatacgaaagagtttcgcacgaaacgattggtcgttagagacttttggaagaga
ggatactatatagccgacgggacacgattcggcggtgactatctagtctacacacggtct
cccaacgaatgtcacgcggaattcgtgctcctctgcactccgatcacagattctcaacga
atttcagcgatgagatgttgtaatcaagtgaaaaagtgtctgatactcgcgacgacttct
cccgactccacacaaccacattatacgaaatgcgagtggtttcgaccagagatgttttga
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