Caenorhabditis remanei (nematode): GCK72_015945
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Entry
GCK72_015945 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K14305
nuclear pore complex protein Nup43
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GCK72_015945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crq03019
]
GCK72_015945
03036 Chromosome and associated proteins [BR:
crq03036
]
GCK72_015945
Messenger RNA biogenesis [BR:
crq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
GCK72_015945
Chromosome and associated proteins [BR:
crq03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
GCK72_015945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_HPS5
Beta-prop_EML
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_LRRK2
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
WD40
WDR90_beta-prop_4th
Beta-prop_TEP1_2nd
WD40_RFWD3
WD40_2
Motif
Other DBs
NCBI-GeneID:
9823399
NCBI-ProteinID:
XP_053585996
UniProt:
A0A6A5GVH7
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Position
IV:23324835..23330581
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AA seq
370 aa
AA seq
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MTVNITTDTDFVPHPQKTEANTSAPIVAETMQHADVKLSKVLFTGEGSSQVLLLGKGRGR
CVALWERDDGIDPFRILSIKNSEVDPNDACKMPENRVCVGYADGSLAVFNTAKEDLTLMS
RIPSVHDGSASRAICRNGNGVLSASSNGTLSDVDVETGKARTVFSGQAGIRSICTSFGSN
VVTAGDSNGQITIWDLRENNGEPSLDPIKLLIPSKKALDAVSSLCTHPAQSNLICCGTDD
GIVGLIDARNVRGASITSTYLVAKKGITQTMFHPTCADSLLVSANDGSLIRIDASAAPIA
MGSRSQKDVIWLEGELANSLRLDPIRNESIFPISSFDIHSDTVVAASSIGMVSLYQQLPF
YPNNTVFGRV
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgacggtaaacatcacgacagacacggatttcgttccgcacccgcaaaaaaccgaagcg
aacacttcggcgccgattgtggccgaaactatgcaacatgcagatgtaaaactgtcgaaa
gtacttttcaccggcgaaggctcatctcaagtccttttgctcggaaaagggcgtggaagg
tgtgtggcgttgtgggaacgcgacgatggcatcgatccgttcagaattctgtcgattaag
aattcagaagtcgatccgaacgatgcttgcaaaatgcccgaaaatcgagtctgcgtcggg
tatgctgacggatcactggcggttttcaacacagccaaagaggacttgacactgatgtca
cgaatcccgtcagtacacgatggaagtgcgagtcgagcgatttgtcgcaatggaaatggt
gttttgagcgcctcatcgaacggaacgctttcagatgttgatgtggagactggcaaggcc
agaaccgtgttttcgggacaagctggaatccggtcgatttgcacctcattcggctcgaat
gttgtgactgccggcgattcgaacggacaaatcacaatttgggatttaagagagaataat
ggggaaccctcactggacccgatcaaacttctgattccatcgaagaaggcgttggacgcg
gtctcttctctttgtactcatccggctcaatcgaatttgatttgttgtggaacagatgat
ggaatagtcggattaattgatgcaaggaatgttcgtggagcaagtatcacgtcgacatat
ttagttgcgaagaagggaatcactcagacaatgtttcatccaacttgtgctgatagtctt
ctcgtatcggcaaatgatggcagcttgataaggattgatgcatccgcggctccgatcgcc
atgggctctcgctctcagaaggatgtgatctggttggaaggagagttggcgaattcgctt
cgtctcgatcccattcgaaatgaatcaatttttccgatctcctcattcgacatccactcg
gatactgtagttgcagccagttcgattggaatggtctcactctatcaacaacttccattc
tacccgaataacaccgtttttggacgtgtctag
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