KEGG   Caenorhabditis remanei (nematode): GCK72_016086
Entry
GCK72_016086      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K09552  spastic paraplegia 7 [EC:3.4.24.-]
Organism
crq  Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:crq00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:crq01002]
    GCK72_016086
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:crq03110]
    GCK72_016086
Peptidases and inhibitors [BR:crq01002]
 Metallo peptidases
  Family M41: FtsH endopeptidase family
   GCK72_016086
Chaperones and folding catalysts [BR:crq03110]
 Other chaperones and cochaperones
  AAA proteases
   GCK72_016086
SSDB
Motif
Pfam: Peptidase_M41 AAA AAA_lid_3 AAA_17 AAA_5 FtsH_ext TIP49 AAA_2 AAA_22 AAA_28 AAA_16 nSTAND3 AAA_18 RuvB_N NPHP3_N AAA_14 Mg_chelatase IstB_IS21 Rad17 RNA_helicase AAA_33 ABC_tran ORC-CDC6-like AAA_25
Other DBs
NCBI-GeneID: 9799067
NCBI-ProteinID: XP_053586086
UniProt: A0A6A5GY79
LinkDB
Position
IV:24409141..24412355
AA seq 751 aa
MHLLLKTGTPQRLSVFFHRTQDYHTSIQRFSSILPQILNARQFPQRRARPKEEKAANTEN
DQKTFKNPWIEISWSSKGHRETKEEVKESSEGGGGNGGKDDDPRKKLMEKMKRWLAISLF
AYGVLFMLSPKTSGGVTADKISWSEFINELLPTGQIYRIIVLPEKDIAYLYVYDTGAKNS
KGERLANMYRVGIPSVARFETEVRAAEAALGLPPEHWTQIEFKRSENIAQWITIIFLGGL
LIGGFLLFKKMKGSFNMTDIMSNMTKGKFTVIDPHSAEGKKQLKIKFKDVAGCSEAKVEI
REFVDYLKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAAESTVPFISMNGSEFVEV
IGGLGASRIRGLFKEARSRSPCIIYIDEIDAIGKKRNEGNGAGGFGGGSGEEEQTLNQLL
VEMDGMGSGNGVVVLASTNRADVLDKALLRPGRFDRHISIDLPTMIERKDMFELYMRKIK
LDHAPQEYSQRLSAMTPGFSGADIMNVCNESAIRAASNKSRVVTIKDVEYALDRVLAGSE
KRSRSLVEEEREVVAYHEAGHALVGWMLEHTDALLKVTIIPRTSAALGFAQYSPRDKKLF
AKEELFDRMCMMLGGRCAENLKFGRITSGAQDDLQKVTKSAYAQVKLYGMSANVGPLSFP
NTEGFQIKPYSKKFGAMFDQEASLIVAKAHEETTKLIRDNMDKLETIAQALLKREVLNYD
DVKQLIGTPKFGDKHVIDMVENVLPKEDALN
NT seq 2256 nt   +upstreamnt  +downstreamnt
atgcatcttcttctaaaaacaggaacaccgcaacggctcagtgtcttctttcaccgaaca
caagattatcacacgtcgattcaaagattctcgtcaattttaccacagattttgaatgct
cgtcaatttccacagaggagagctcgcccgaaagaggagaaggcagcaaatacagagaat
gatcagaaaaccttcaaaaatccatggatcgaaatctcatggagctcaaaaggacaccga
gagaccaaagaagaagtcaaagagtcgagtgaaggtggcggtggaaacggcggaaaagac
gatgatccgcgcaagaaattgatggaaaaaatgaaaagatggctagcgatttccctattc
gcttatggagttctattcatgctctctcctaaaacttcaggcggagttacagctgacaag
atttcctggagtgaatttatcaatgagttactgccaacaggacaaatttatcgaattatt
gtactccctgagaaggatatcgcttatctctatgtctatgatacaggagcgaaaaattca
aaaggagaacgacttgcgaacatgtatagagtagggataccatcggtagcaagattcgag
acagaagtccgtgctgccgaggcggcgctaggtctcccaccagagcactggacacaaatt
gagtttaaacgatctgaaaatatcgctcaatggatcacaattatcttcctgggcggtcta
ctcatcggcggatttctgttattcaaaaaaatgaagggatctttcaatatgactgatatc
atgtctaatatgacgaaaggaaaattcacagttatcgatccacacagtgcggaggggaaa
aaacagctgaaaatcaagtttaaggatgtcgctggttgtagtgaggcgaaagtggagatt
cgtgagtttgtggattatttgaagaatcctggcaggtttacgaaactcggtgccaagctg
ccacgtggcgctctcctcaccggaccgcccggatgtggtaaaactcttctcgcaaaggct
ctcgccgcggaatccactgtcccattcatctcaatgaatggttcggagtttgtggaggtg
attggtggtctgggtgcgtcgagaattcgtggtttattcaaagaagcacgctcacggtct
ccttgtatcatttatatcgatgagattgatgcgatcggaaagaagagaaacgagggaaat
ggtgcaggcggatttggaggcggttccggtgaagaggagcaaacactcaatcaacttctc
gtcgaaatggacggaatgggatccgggaacggtgttgtcgtgttggcatccacaaaccgt
gccgatgttctcgataaggccttgttacgaccgggacgatttgacagacacatttcgatt
gatctaccaacaatgatcgagagaaaggatatgttcgagttgtacatgcggaagattaag
ctagaccacgcccctcaagagtattctcaacgattgtcggcgatgacacccggattttct
ggtgctgatatcatgaatgtctgtaacgagtcagcgatccgtgcggcgtcgaataaatcc
cgtgtggtgacgattaaggacgtggaatatgcattggatagagtgttagctggatcagag
aagagaagtaggagtttggtggaggaggagagagaagtggtggcttatcacgaagcaggc
catgccctcgtcggatggatgcttgaacacacagatgctctcctgaaagtcactattatc
ccgagaacctctgcggctctcggattcgcgcagtattcgccacgtgacaaaaaactgttt
gcgaaggaggagttgttcgatagaatgtgtatgatgcttggtggtcgatgcgctgagaat
ctgaaattcggacgaatcacttcgggtgcacaagacgatcttcaaaaagtgacgaaatcc
gcgtacgctcaagtgaaattatatggaatgagtgcgaatgtcggaccgctttcgttccct
aacaccgagggatttcagattaaaccgtactcgaagaaatttggagcaatgtttgaccag
gaggcgtcattgattgtggcgaaggcgcatgaggagacgacgaagttgattagggataat
atggataagctggaaacgatcgctcaagcgcttctaaaacgtgaagttctcaattacgac
gacgtgaaacaactgatcggaaccccgaaattcggagacaaacatgtgattgatatggtg
gagaatgtgttgccgaaggaggacgctctcaattaa

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