Caenorhabditis remanei (nematode): GCK72_016356
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Entry
GCK72_016356 CDS
T09085
Name
(RefSeq) hypothetical protein
Organism
crq
Caenorhabditis remanei (nematode)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Lectin_C
Cadherin_CELSR2_9th
Cadherin_pro
Big_9
Big_13
K319L-like_PKD
Cadherin_FAT4_N
Bestrophin
DUF4493
Motif
Other DBs
NCBI-GeneID:
9808373
NCBI-ProteinID:
XP_053586230
UniProt:
A0A6A5GYW6
LinkDB
All DBs
Position
IV:<25677026..>25698496
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AA seq
1884 aa
AA seq
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MLLKQLLLTFTISIGLASSACFDNGDKEIQGGCYKFVPQKLTWNDARNWCHYQNPVTASY
LAYVPNQFTSNFLASYARSAFGTDDGNFWIGLSRSSNGSWTWDNGFPVGFTNFGPQNGQN
YGAESIVNAKWNAYGSSDKFFFVCSYDPAAPPTFPPPQSTTTSSPVAVSTQAVPTTTVLL
NATESTWSSTTIDDIWSDWSDCGVYTCGPYDNSLICAAPLTLPPQQSTTYAPIAVSTHAV
PTTSDSASHLLIEPSFLLVEEDWPVGTHLPVTLCPKNVKILSGDPSNYFKVVKINETCST
LQLNLALDADKENADGLRGQSFSLVIAGPKKSRATLEVQVVDVNDNAPIFTNTPSTFEIS
ENAEIGTELFKISTLDPDTGISGISRFSIEGDENFRLDKRKCSNGKCSTLLRLAKTLDFE
SKPIHTFNITAKDGDPHSNRTHTVAHTVTVHVKNENDEPPKFVTDLSQTFQVPKSLKSGD
TVTRIEAIDVENSDGDVRIELAENPNFQVDSKSGALILKALPTTDDVITLKITAMSSKNQ
KSKEAEIRLKLGDEKGAEPKIESQEKASGELCEFPIYEAYLIQGTGQFSTPLKIKTLKSV
VEEKPRLIGGSESFDLEILDDFHVELKILNSETIAAQSLDNAQLLVKSPFGQCRIVLRSL
APPTLTPKQASPPPKPSSPPKFEKTEYQFQVVENREPTVLGEVKVVADGPVTFELLGENA
AKFEISKSGEIQNLEKIDREEVEKFELVVKATDQNGASTKSQLTIHVKDENDNSPIFEKD
HYLITVDEGKSEKLKISATDSDSGKNGQIVYSIDQKIDDLPIDISPDGMLFIGAIDREAM
GNSKNEVNLTVTASDSGEPRRSSSVVVTIRVKDINDNAPIFSNSRYSIPLDANIFPGGII
GRLQATDSDATSPNNYVTYTSENPQFKVSDSGEIVFIGPGILEKNVNLEFNVTASDGGDP
TNQAVAQVVLNEHRAMKSIENELTTQINSNDTGGEKSEIKWLNAGMPGYTYEIIRASADG
FSDSEVATWISIDAKSGRIHTIKKVDPSKVKQIKLHISMRKGKREVPVELIINVMDTDDI
TPVYSNPTVPRKFTSSESVTVGTIVGDMAVGGVKEGDELKYNLKIVSGPKGKLQIDRYGL
LRVVKPLDFESEKLIKGTVEALVLKNSKSAVAPFQLTIQDANDNRPIFKNSSVFTVSIYE
NSVLGTVLDLPYPLATDRDSSNNSTIRLVAPLDFETQRVHSLSIKCVDNQGRDPHHEVFA
SVTVTVIDVNDNPPVIHNTDLTHLSIEEDAQIGQVVTVLVISDSDEGGVQNTEIDVNSTL
FHVDHEKKLIVQSPLKGHAGQRICSTVTARDPGGLTATSPYCVTVYPAKNTHHNPLVVLP
KQNSIHYFDENIVYEELLKVKVLEEEGERENVTFRLDEMFKKDWQMFTIGETNGSLRARQ
PFDFEKKTVHEIKILACRVDNCTSTHLFISVNDRNDNCPMFPKQDVRLTVLENEKGKRQV
GRIPAALDSDFHSDNTKVCYTTDTPIFFFADPTLPILFTNSSFDREHKKQHQITITAYDC
HLSCRDPHKPINGTIVALIDVIDVNDNFPKFSEKIYTTTIVQGHVTAGSHVLTVQATDLD
EELEGLKYSIRGFVRSPSQSFTPSESPITIDKSSGEITANELLKDSSYSFTVVVTDGAGH
EDTASVMISVVTYAQQTELVFDAPFELVIKNEKKIAENLSNATGLQTIVDKCRQNSNFTL
MLVHFMDRDGQFVNVDRAVNLLMTSSADSRRELRSVYGLREAFPPVPIPSRVPQYILIAV
LLFFAISIFSMCIWCRQRNNYERKLRHISAQASTVHTVTLGRGGKHGSNPAYGEIPIVTR
HHPPPAPPPPTSSGASVNLQSTEL
NT seq
5655 nt
NT seq
+upstream
nt +downstream
nt
atgctgctcaaacaactattactaaccttcacgatatctattggacttgccagcagtgct
tgtttcgacaacggtgacaaagagattcaaggaggatgttataagtttgtgccacagaag
ttgacttggaacgatgctcggaattggtgtcactatcagaatccggttacagcaagttac
ttggcatatgtaccaaatcagtttacctccaactttctagcttcctatgcccgctctgct
tttggaactgatgacggaaacttctggattggcctgagtagatcatctaacggctcttgg
acatgggacaacggattccccgttggttttactaatttcggacctcaaaatgggcaaaac
tacggggcggagagcattgtcaacgccaaatggaacgcttatggctcttcggacaagttc
ttcttcgtgtgcagttacgatccagcggcaccaccaacattcccaccaccacagtcgacg
acaacaagtagtccggttgcagtgtctacacaggcggtccctacgactacagttttactc
aatgcaactgagtcaacgtggagttcaacaacaatcgacgacatatggtccgattggtct
gattgcggtgtctacacatgcggtccctacgacaacagtctaatttgtgcggcaccacta
acactcccaccacaacagtcgacgacatatgctccgattgcagtgtcaacacatgcggtc
cctacgacttcagattccgcttcccatctgctcatcgaaccctcattcctcctggtcgaa
gaagattggccagtggggacacacctcccagtgacgttatgtccgaagaatgtcaaaata
ctgtccggtgacccgtcaaactacttcaaagttgtcaaaatcaatgagacatgctcgaca
ctgcaattgaatttggcactggatgctgataaggaaaacgccgacggtctacgcggacaa
tcgttttcgctcgtcattgcgggaccgaaaaagtcgagagccacgttggaagttcaggta
gtcgatgtcaacgataacgctccaatcttcaccaacactcccagtacatttgaaatatct
gaaaacgctgaaattggcacggagctcttcaagatatcaacactggaccccgacactgga
atctctgggatttctcggttttctatagaaggcgacgagaatttccgtttggacaaacgg
aagtgttccaatggaaaatgctctactctcctgcgtctcgccaagacactcgactttgaa
agcaaacccatccacaccttcaatatcaccgccaaggatggggatcctcactcgaatcgg
acacataccgtagcccatactgttacagtacacgtcaaaaatgagaatgacgaaccgccg
aaattcgtcaccgatttatcccaaaccttccaagttccgaaatctctcaaatctggggat
actgtaaccagaatcgaggctatcgacgtcgaaaactctgacggcgacgtgcgaatcgag
ttggctgaaaaccccaatttccaagtggactcaaaatctggagcactgattctgaaagct
ctcccaactacagatgacgtcataaccctcaaaataacagcgatgtcatcaaaaaaccaa
aagtcaaaagaagctgaaattcggctgaaattgggtgatgaaaaaggggcggagcctaaa
attgagagtcaggagaaagccagcggagagctttgcgagttcccgatatatgaggcttat
ttgattcaaggaaccggacaattttccacgcctttgaagattaagacactgaaatcggtg
gttgaggaaaagcctcgtctaatcggtggctctgaaagtttcgatttggaaatcttggat
gatttccacgtggaattgaaaatactgaactccgaaacgatcgcggctcaaagtttggac
aacgctcagctactcgtcaaatcgcctttcggtcagtgccgtatcgtcctccgctcgttg
gctccgcccactttgaccccaaaacaagcctcgccccctccgaaaccgagctcccccccg
aaatttgagaagactgaatatcaatttcaagtggtcgagaatcgggaacctacagtactc
ggagaggtcaaagtggtggctgacggccctgtgacctttgaattgttgggtgaaaatgcc
gcaaaatttgaaatttcgaaaagtggagagattcagaatttggagaaaatcgacagagaa
gaagtggagaaatttgagttggtggtgaaggcaacggatcagaatggcgcctctactaag
tcacaactcacaattcacgtaaaagacgaaaacgacaactctccgatattcgaaaaagat
cactatctgatcacagtggatgagggaaaaagtgaaaagctcaaaatctcggccacggat
tcagactctggaaaaaacggtcaaatcgtgtattcaattgatcaaaaaattgatgatcta
ccaatcgatatctcacccgacgggatgttgttcattggagcgattgatcgagaagctatg
gggaattcaaagaacgaagtgaatctgacggtgacggcgtcggattctggagaacctaga
aggagttcaagtgtcgtcgtgacgattagagtgaaggacatcaacgacaacgctccgata
ttttccaactcccgctattcgattcctctcgacgcgaacatctttcccggtggaatcatc
ggacgtcttcaggcgacggattcagatgccacgtcgcccaataactatgtcacgtacacc
tcggaaaacccgcaattcaaggtttctgattccggagaaatagtgttcattggacctgga
atattggagaaaaacgtgaatttggagttcaatgtgaccgcttcagatggaggggacccg
acgaatcaggcagtggctcaagtggttctgaatgagcatagagcgatgaaatcgattgaa
aacgagctcacaactcagataaatagcaatgataccggtggagagaagtctgaaataaaa
tggctcaacgcgggtatgcctggatacacctacgagataattcgcgcctccgccgacggg
ttttccgactccgaagtggccacgtggatatcaatcgacgcgaaatccggcagaatccac
accatcaaaaaggtggatccatcgaaagtgaagcagatcaaactacacatttcaatgaga
aaaggaaaacgcgaagtgcccgtggaacttattatcaacgtgatggacacagatgacatt
accccagtctacagtaatcctacagtaccccggaagttcacttctagcgaatcggttact
gtaggtacaatagtcggggatatggcggtgggtggagtcaaggaaggagatgaattgaaa
tataatctgaaaatcgtgtcgggacccaaaggaaaactacaaatcgatcgatacggactg
cttcgagtggtcaaaccgttggacttcgaaagtgaaaaattgataaaggggactgttgaa
gcacttgttctgaaaaactcgaaatccgccgtggcaccgttccaactaacaattcaagac
gctaacgacaatcgaccaatattcaaaaactcgtccgtgttcaccgtctctatctacgaa
aattcagtgttgggtactgtactcgacctaccgtaccctctggcaacggatcgggattcc
agcaacaactccactatccgcctcgtcgccccattggactttgagacccaacgtgtccac
tcgcttagcattaaatgcgtggataaccagggtcgtgatccccatcacgaagtgttcgcc
tcggttactgtaaccgtaatcgacgtgaacgataacccaccggttattcataacacagac
ttgacacatttatcaattgaagaggatgctcaaatcggtcaagtggttactgtacttgtg
atctccgattcagatgaaggaggcgttcagaatactgaaatcgacgtaaactcaacgtta
ttccacgtagatcacgagaagaaacttatcgttcaatcgcctctaaagggacacgcagga
caacgcatctgttctacagtaaccgcacgtgacccgggaggactcaccgccacatcaccg
tactgtgttacagtataccccgctaaaaatacgcatcacaatccgctggtcgtgttgccg
aaacagaattcgatacactattttgatgagaatattgtgtatgaggagttgttgaaggtg
aaagtgctggaagaagaaggggagagagagaatgtcacgttccggttggatgagatgttc
aagaaggactggcaaatgttcactatcggagaaaccaacggaagtcttcgtgcccgccag
ccattcgatttcgagaagaagacggttcatgagataaagatcctggcatgccgcgtggat
aattgcacctcaacccatttattcatttcggtgaatgaccgtaatgacaactgtccaatg
ttccccaaacaggacgtccgtctcaccgtactggaaaacgaaaagggcaaacgacaagtc
ggccggattcctgccgctttggactcggatttccattcggacaacactaaagtgtgctat
accactgacacgcccattttcttctttgctgacccaactctgccaatcctcttcacgaat
tctagttttgatagggaacacaaaaaacagcatcagattacgatcaccgcctacgactgt
cacctttcgtgccgagaccctcataaaccgatcaatggaaccattgtcgctctaatcgac
gtcatcgatgtgaacgataacttcccgaaattctctgaaaaaatctacacgactacgata
gtccagggacacgtcaccgcgggaagtcatgttttgacagtgcaagcgacggatttggat
gaagaattggagggattaaagtatagtatacggggattcgttaggtcaccgagtcagtcc
ttcaccccctccgagtctcccatcactatcgacaagtcatctggagagatcactgccaat
gaacttctcaaagactcctcctactcgttcacagtggtagtcaccgatggggcggggcat
gaggataccgcgtctgttatgatctctgtggtcacatacgctcaacaaacggagcttgtg
ttcgatgcaccatttgagttggtcataaaaaatgagaagaaaattgcggaaaacctctcc
aacgccaccggcctccaaaccatcgtcgacaagtgtcgtcagaactcaaatttcactctg
atgctagtccacttcatggatcgagacggacaatttgtgaacgtggatcgagccgtgaat
cttctgatgacgtcatcagcagattctaggagagagctgagaagtgtctatggcctacgt
gaggccttcccaccagtgcctatcccatcaagagtgcctcagtatattttgatcgccgta
ttactattctttgccatttccatcttctccatgtgtatttggtgtcgacaacgaaataat
tatgagcggaagttgagacatatttcagctcaagcgtctacagtacatacagtaaccctg
ggaaggggtgggaagcatggctccaaccccgcctacggagagatcccaatcgtcactcga
caccatccgccaccggctccgcctcctccgacgtcttctggagcttctgtgaatcttcaa
tctactgaattgtaa
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