Caenorhabditis remanei (nematode): GCK72_016364
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Entry
GCK72_016364 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K20163
DENN domain-containing protein 4
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crq04131
]
GCK72_016364
Membrane trafficking [BR:
crq04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
GCK72_016364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
DUF2464
PPR
Motif
Other DBs
NCBI-GeneID:
9808386
NCBI-ProteinID:
XP_053586236
UniProt:
A0A6A5GXQ6
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All DBs
Position
IV:complement(25726497..25734433)
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AA seq
1538 aa
AA seq
DB search
MSSGTGLTGSHDERRLFEHFVIAGLPENQQLERLTPSSEECGLRNTQPLAPITDIAVIFP
SLGEKPPDGFDVIESTTLGYPADLNHGSIGQKSCFLCFRRGYHKAPLVDIGILDEGRGDK
PMVDSNVVQTTPFGRCANVNNASQGIYLTYRRAPPNSSQSQFVVTDIKVILANKGEIPPH
TYYKITKNLNKGLVGSDVFICYKKSQGTAKRLAYKPAVLDYFPRSDHSDVMEDFKLAQNV
AMFCLPMGALIECWPTKCAPPDRSFSTFVLTDENGTKFYGSAVTFYEKYTKELTEDQLET
LDLRSNENDQEGGTVGDSNSNNDPADDVLFYKNVSICLISRFPFFNSFKRFLFFLHRMSS
TPSCGHPVPIERYISHLMYEVSFPTPRRPRVFMQLGAENISFDSHDDSQLPLNGAQLIDT
LKYLGSDNLMYLMLLALLEQKILIHSLRPWMLAAVAESVCALMFPFHWQCPYIPQCPLGL
AGVLHAPLPFIAGVDSRYFELYEDPPDDVTCFDLDTSTISFSSVRASFKTSMLPKKPAKQ
LKNALEDIFGKLQQLDYSQNEKTEGGFIPVDKDLKQQQKRREYENAIHDAFLKFIASIMK
GYQAFLRPIKSAPANAHATDTGNLFDLDGFLRSRDRSSAEFYKRFSETQSFMRFIEERSF
VSDKNTYNAFFDDCIIKLTTAVEDGRDIGELQLLEPDNSHSHTTTPTCAITDTRVVFIPA
PEPFVNQETGEEMQFVYGEFPTKMKSENFQLDRLEKSGKDGEKVPMHFEASRCSAVRTKP
ETRSSLLAATNAVKTNPLHWSKTLLFYSYSLWFMQLDSLLIAAPNKKKIIRLAFNVLDRM
EKTEIFPLDQVCYRILIELCGKYNQPAMAVKVMRAMQRAGLEQNAVTYGIYHRAVMDATW
PSPARTKAIRMWNLLKIVVTGAEFLRKLAKVDRRPLDLSVLASQTPENGSAENVAEITVD
YQITSYPLDEEENDRKSSVSSQQNAIMDPLGAMGLENSREKAKERSKSLGKIGMSPSRAK
FFADHATLPFSSENTPKSDKKTEKSGWFKGIANSPMFKMIKSTTFDSPKPPSADSSDAGS
ITGSSPSFHSVVTQFKKGYDDVMPSRFRLGVTTLLNKSVGAMGSGMIYSDDRTSSENPFF
VNAKDPAYVLDSGNPCCLLKEEYWMREVYLQLKRSRERLEKGQKSMESTSESAENEAETL
PFSSPKNAAGKLEVILCTATYCPSCHTMVYDEEIMAGWKVDDQNLNTVCPHCSGNTSGAT
DAVATTETTSPESVFAPRLKIRMRWIDEMRNSWYQPGGLQESRNATPEKTPPPPETCLEV
AFVSPLVLRRELETILTLDKDAMRNESIKTTHPIVFWNLIYYLRRLSLPSHLFSWISERH
HIRCVFDIPTQHDESIIPLYFYNPNHDGNPAFGEFNQKIQRRTDDGKETNAYSSWKLVTD
SVNKNLLFKAVQTLVNSSRLVKNGSVHVGAHFPIFRDIQFASIDLFGRALLRDALDTQYD
TESNKLPPKIKEILPLQDHPLSHVTRACRKVFMPLDLF
NT seq
4617 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtgggaccggtctgaccggatcacacgatgaacgacgtctattcgaacatttc
gtcatagctggactccccgaaaaccaacaactggaacgtctgactccttcatccgaagaa
tgcggcctccgaaacactcaaccactggcaccaatcacagatatcgctgtgatttttccg
agtcttggtgaaaaaccacccgacggattcgatgtgatcgaatcaactaccctgggctat
cccgccgatttaaatcatggttccatcggccaaaaatcgtgttttctgtgttttcgacgt
ggatatcataaggctccgttagtggatatcgggatattggatgaggggcggggcgacaaa
ccgatggtcgactcgaatgttgtacagacgacgccgttcgggcggtgtgccaatgttaat
aatgcgtcgcagggaatctacctaacctaccgtcgtgctccaccgaattcctcgcaaagc
caattcgtcgtcaccgatataaaagtgattctcgcgaataaaggagaaatcccgccgcat
acctattataaaatcacaaaaaacttgaacaagggactcgtcggttccgatgtgttcatt
tgttataaaaagtcacagggaaccgcgaaacggttggcttataagccggcagtgttggat
tatttcccgcggtccgatcattccgatgtgatggaggatttcaaattagcgcagaatgtc
gcaatgttttgtcttccaatgggtgcactcatcgagtgttggccgacgaaatgcgctcca
ccggacagaagtttttccacttttgtgctcactgatgagaatggcacgaaattctacggc
tccgctgtgacattctacgagaaatatacaaaagagttgactgaagatcaactcgaaacc
ttagatctccgcagtaatgaaaatgaccaagagggcgggacagtcggcgattcaaatagt
aataatgacccggctgatgatgtcctcttctacaaaaatgtgtcaatatgtctgatctca
cgatttccgttcttcaactctttcaaacgcttccttttcttccttcatcgaatgtcatcg
acaccgagttgcggtcatccagtgccaattgagcgttatatttcacatttaatgtacgaa
gtctcgtttccaacacctcgtcggccacgtgtcttcatgcaattgggcgctgaaaatatc
agtttcgattcacatgatgatagtcagctcccattgaacggtgcccagttaatcgatact
ctgaaatacctgggatctgataatttgatgtatttaatgttgttggcactgctcgagcag
aaaatattgattcatagtttaagaccctggatgctcgccgctgtcgctgaatcagtatgc
gctttgatgttcccattccattggcaatgtccatacatcccacagtgtcctctcggtctc
gccggtgttctccacgcccccttgccattcatcgctggtgtagactcaagatatttcgag
ctctatgaagatccgcctgatgacgtcacctgtttcgatttggatacttctacgatcagt
ttttcatccgttcgcgcctctttcaagacatcaatgttgccgaaaaaaccggcgaaacag
ttgaaaaacgcgctggaagatatatttgggaagcttcagcagctggattactcgcaaaac
gaaaaaacggagggaggctttattccagtcgataaggatctgaaacagcaacagaaacgg
cgggaatatgagaatgccattcacgacgctttcttgaaatttatcgctagcattatgaag
ggatatcaggcgtttttgcggccgatcaagagtgcaccggctaatgcacacgcaactgat
accgggaatctgtttgatttggatgggttcttgagatcccgtgaccgttcatctgcagaa
ttctacaaacgattctctgagactcagtcgtttatgagattcatcgaggaacgaagcttt
gtatccgataaaaatacgtataatgcattctttgatgattgtattatcaagctgacgaca
gctgttgaagatggccgagacattggggaacttcaacttctcgaaccggacaactctcac
agtcatacaacgacgccgacttgtgcgataacggatacaagagtggtatttatccctgca
cccgagccatttgtcaaccaggagaccggtgaggagatgcaatttgtgtatggagagttt
ccaaccaagatgaaaagcgagaatttccaattggatcgtttggagaaaagcgggaaggat
ggggagaaggttccgatgcattttgaagcttctagatgctctgcagtacgcacgaaacca
gaaaccaggtcttcacttctcgcagcaacgaacgctgtgaaaactaacccacttcattgg
tcaaagacgctgctcttctactcgtactctttgtggttcatgcaattggatagtcttctg
attgctgcgccaaacaagaagaagatcatccgactcgcgtttaatgtgctcgatcgaatg
gagaaaacggaaatattccctctggatcaagtgtgttatcgaattcttatcgagttgtgc
ggaaaatataatcagccggcgatggcggtgaaagtaatgagagcgatgcagagagctggg
ttggaacagaacgctgtcacctacggaatctaccatcgcgctgttatggacgccacgtgg
ccttcacctgcccgaacgaaagccatcagaatgtggaatttgctgaaaatcgttgtaacc
ggagcggaattccttcgaaaattggcgaaagtcgaccggcggcccctcgatttatcagtg
ttggcttcccagacgccagaaaatggatctgctgaaaatgtggcagagattactgtagac
tatcaaattacatcgtatccattggatgaagaggagaatgatcggaaaagttcagtttcc
agtcaacagaatgcgattatggatccacttggagcaatgggactcgagaattcgagagaa
aaggcgaaagaacgatcgaaatcgcttggaaaaatcggaatgtctccatcgagagcaaag
ttctttgccgatcacgcgacactaccattttccagcgaaaatacaccgaaatctgacaaa
aagacagagaaaagtggatggtttaaaggaattgcgaacagtccaatgttcaaaatgatc
aaaagcaccactttcgactcccccaaaccgccttccgccgatagcagtgacgctggttcc
atcactggctcctccccatccttccattccgtcgtcactcagttcaaaaaaggatatgat
gacgtcatgccgtccagattccgtcttggtgtgaccactcttctcaacaaatctgttggt
gcgatgggaagcggaatgatttattcagatgaccgcacgtcgtccgagaatccatttttt
gtgaacgccaaggaccccgcctacgttctggattcaggcaacccgtgttgtctgctaaaa
gaagaatactggatgagagaggtctatttacagttgaaaaggagtagagaacgactggaa
aagggtcagaaatccatggaaagtacatcggaatcggctgaaaatgaggccgaaacactt
ccgttctcctctccaaaaaacgcggcgggaaaactcgaagtgattctatgcactgccacg
tattgtccatcatgtcacacaatggtttacgacgaggaaataatggctggatggaaagtt
gacgatcagaatctcaatacagtatgcccgcattgctctggaaatacaagtggagctacc
gacgccgtcgcgacaactgaaacgacgagtccggagagtgtgttcgcaccacgactaaaa
attcgaatgcgttggatcgatgagatgcgtaatagttggtatcagccaggaggacttcag
gagtcgaggaatgcgacgcccgaaaagacacctccaccgcccgaaacctgtcttgaagtc
gccttcgtgagccctctcgtcctccgtcgtgaactcgaaaccatcctcacattggacaaa
gacgcaatgagaaacgaatcgataaaaacgacgcaccccatcgtattctggaatttgatc
tactacttgcgtcgtctctctcttccttctcatttgttctcgtggatttctgaaagacat
cacatcagatgtgtattcgatattccaacgcaacacgatgaatcgattattccattgtat
ttctataatccgaatcatgatggaaatccggcattcggagaatttaatcagaaaattcag
agaagaactgatgatggaaaagagacgaatgcgtactcgtcatggaagttggtgacggat
tcagtgaataagaatttgctttttaaagccgtccaaacgctggttaactcgtcgagatta
gtgaagaacgggagtgttcatgttggagcacatttccctattttcagagacatccaattc
gcctcaatcgatctattcggtcgcgccctgctccgcgacgctttggacactcaatacgac
actgaatctaataaattgccgccaaaaatcaaagaaattcttcccctccaagatcatcca
ctatcccatgtcacaagagcgtgccgtaaagtttttatgccactcgacctattttaa
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