KEGG   Caenorhabditis remanei (nematode): GCK72_016364
Entry
GCK72_016364      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K20163  DENN domain-containing protein 4
Organism
crq  Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:crq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:crq04131]
    GCK72_016364
Membrane trafficking [BR:crq04131]
 Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    GCK72_016364
SSDB
Motif
Pfam: DENN uDENN dDENN PPR_2 DUF2464 PPR
Other DBs
NCBI-GeneID: 9808386
NCBI-ProteinID: XP_053586236
UniProt: A0A6A5GXQ6
LinkDB
Position
IV:complement(25726497..25734433)
AA seq 1538 aa
MSSGTGLTGSHDERRLFEHFVIAGLPENQQLERLTPSSEECGLRNTQPLAPITDIAVIFP
SLGEKPPDGFDVIESTTLGYPADLNHGSIGQKSCFLCFRRGYHKAPLVDIGILDEGRGDK
PMVDSNVVQTTPFGRCANVNNASQGIYLTYRRAPPNSSQSQFVVTDIKVILANKGEIPPH
TYYKITKNLNKGLVGSDVFICYKKSQGTAKRLAYKPAVLDYFPRSDHSDVMEDFKLAQNV
AMFCLPMGALIECWPTKCAPPDRSFSTFVLTDENGTKFYGSAVTFYEKYTKELTEDQLET
LDLRSNENDQEGGTVGDSNSNNDPADDVLFYKNVSICLISRFPFFNSFKRFLFFLHRMSS
TPSCGHPVPIERYISHLMYEVSFPTPRRPRVFMQLGAENISFDSHDDSQLPLNGAQLIDT
LKYLGSDNLMYLMLLALLEQKILIHSLRPWMLAAVAESVCALMFPFHWQCPYIPQCPLGL
AGVLHAPLPFIAGVDSRYFELYEDPPDDVTCFDLDTSTISFSSVRASFKTSMLPKKPAKQ
LKNALEDIFGKLQQLDYSQNEKTEGGFIPVDKDLKQQQKRREYENAIHDAFLKFIASIMK
GYQAFLRPIKSAPANAHATDTGNLFDLDGFLRSRDRSSAEFYKRFSETQSFMRFIEERSF
VSDKNTYNAFFDDCIIKLTTAVEDGRDIGELQLLEPDNSHSHTTTPTCAITDTRVVFIPA
PEPFVNQETGEEMQFVYGEFPTKMKSENFQLDRLEKSGKDGEKVPMHFEASRCSAVRTKP
ETRSSLLAATNAVKTNPLHWSKTLLFYSYSLWFMQLDSLLIAAPNKKKIIRLAFNVLDRM
EKTEIFPLDQVCYRILIELCGKYNQPAMAVKVMRAMQRAGLEQNAVTYGIYHRAVMDATW
PSPARTKAIRMWNLLKIVVTGAEFLRKLAKVDRRPLDLSVLASQTPENGSAENVAEITVD
YQITSYPLDEEENDRKSSVSSQQNAIMDPLGAMGLENSREKAKERSKSLGKIGMSPSRAK
FFADHATLPFSSENTPKSDKKTEKSGWFKGIANSPMFKMIKSTTFDSPKPPSADSSDAGS
ITGSSPSFHSVVTQFKKGYDDVMPSRFRLGVTTLLNKSVGAMGSGMIYSDDRTSSENPFF
VNAKDPAYVLDSGNPCCLLKEEYWMREVYLQLKRSRERLEKGQKSMESTSESAENEAETL
PFSSPKNAAGKLEVILCTATYCPSCHTMVYDEEIMAGWKVDDQNLNTVCPHCSGNTSGAT
DAVATTETTSPESVFAPRLKIRMRWIDEMRNSWYQPGGLQESRNATPEKTPPPPETCLEV
AFVSPLVLRRELETILTLDKDAMRNESIKTTHPIVFWNLIYYLRRLSLPSHLFSWISERH
HIRCVFDIPTQHDESIIPLYFYNPNHDGNPAFGEFNQKIQRRTDDGKETNAYSSWKLVTD
SVNKNLLFKAVQTLVNSSRLVKNGSVHVGAHFPIFRDIQFASIDLFGRALLRDALDTQYD
TESNKLPPKIKEILPLQDHPLSHVTRACRKVFMPLDLF
NT seq 4617 nt   +upstreamnt  +downstreamnt
atgagtagtgggaccggtctgaccggatcacacgatgaacgacgtctattcgaacatttc
gtcatagctggactccccgaaaaccaacaactggaacgtctgactccttcatccgaagaa
tgcggcctccgaaacactcaaccactggcaccaatcacagatatcgctgtgatttttccg
agtcttggtgaaaaaccacccgacggattcgatgtgatcgaatcaactaccctgggctat
cccgccgatttaaatcatggttccatcggccaaaaatcgtgttttctgtgttttcgacgt
ggatatcataaggctccgttagtggatatcgggatattggatgaggggcggggcgacaaa
ccgatggtcgactcgaatgttgtacagacgacgccgttcgggcggtgtgccaatgttaat
aatgcgtcgcagggaatctacctaacctaccgtcgtgctccaccgaattcctcgcaaagc
caattcgtcgtcaccgatataaaagtgattctcgcgaataaaggagaaatcccgccgcat
acctattataaaatcacaaaaaacttgaacaagggactcgtcggttccgatgtgttcatt
tgttataaaaagtcacagggaaccgcgaaacggttggcttataagccggcagtgttggat
tatttcccgcggtccgatcattccgatgtgatggaggatttcaaattagcgcagaatgtc
gcaatgttttgtcttccaatgggtgcactcatcgagtgttggccgacgaaatgcgctcca
ccggacagaagtttttccacttttgtgctcactgatgagaatggcacgaaattctacggc
tccgctgtgacattctacgagaaatatacaaaagagttgactgaagatcaactcgaaacc
ttagatctccgcagtaatgaaaatgaccaagagggcgggacagtcggcgattcaaatagt
aataatgacccggctgatgatgtcctcttctacaaaaatgtgtcaatatgtctgatctca
cgatttccgttcttcaactctttcaaacgcttccttttcttccttcatcgaatgtcatcg
acaccgagttgcggtcatccagtgccaattgagcgttatatttcacatttaatgtacgaa
gtctcgtttccaacacctcgtcggccacgtgtcttcatgcaattgggcgctgaaaatatc
agtttcgattcacatgatgatagtcagctcccattgaacggtgcccagttaatcgatact
ctgaaatacctgggatctgataatttgatgtatttaatgttgttggcactgctcgagcag
aaaatattgattcatagtttaagaccctggatgctcgccgctgtcgctgaatcagtatgc
gctttgatgttcccattccattggcaatgtccatacatcccacagtgtcctctcggtctc
gccggtgttctccacgcccccttgccattcatcgctggtgtagactcaagatatttcgag
ctctatgaagatccgcctgatgacgtcacctgtttcgatttggatacttctacgatcagt
ttttcatccgttcgcgcctctttcaagacatcaatgttgccgaaaaaaccggcgaaacag
ttgaaaaacgcgctggaagatatatttgggaagcttcagcagctggattactcgcaaaac
gaaaaaacggagggaggctttattccagtcgataaggatctgaaacagcaacagaaacgg
cgggaatatgagaatgccattcacgacgctttcttgaaatttatcgctagcattatgaag
ggatatcaggcgtttttgcggccgatcaagagtgcaccggctaatgcacacgcaactgat
accgggaatctgtttgatttggatgggttcttgagatcccgtgaccgttcatctgcagaa
ttctacaaacgattctctgagactcagtcgtttatgagattcatcgaggaacgaagcttt
gtatccgataaaaatacgtataatgcattctttgatgattgtattatcaagctgacgaca
gctgttgaagatggccgagacattggggaacttcaacttctcgaaccggacaactctcac
agtcatacaacgacgccgacttgtgcgataacggatacaagagtggtatttatccctgca
cccgagccatttgtcaaccaggagaccggtgaggagatgcaatttgtgtatggagagttt
ccaaccaagatgaaaagcgagaatttccaattggatcgtttggagaaaagcgggaaggat
ggggagaaggttccgatgcattttgaagcttctagatgctctgcagtacgcacgaaacca
gaaaccaggtcttcacttctcgcagcaacgaacgctgtgaaaactaacccacttcattgg
tcaaagacgctgctcttctactcgtactctttgtggttcatgcaattggatagtcttctg
attgctgcgccaaacaagaagaagatcatccgactcgcgtttaatgtgctcgatcgaatg
gagaaaacggaaatattccctctggatcaagtgtgttatcgaattcttatcgagttgtgc
ggaaaatataatcagccggcgatggcggtgaaagtaatgagagcgatgcagagagctggg
ttggaacagaacgctgtcacctacggaatctaccatcgcgctgttatggacgccacgtgg
ccttcacctgcccgaacgaaagccatcagaatgtggaatttgctgaaaatcgttgtaacc
ggagcggaattccttcgaaaattggcgaaagtcgaccggcggcccctcgatttatcagtg
ttggcttcccagacgccagaaaatggatctgctgaaaatgtggcagagattactgtagac
tatcaaattacatcgtatccattggatgaagaggagaatgatcggaaaagttcagtttcc
agtcaacagaatgcgattatggatccacttggagcaatgggactcgagaattcgagagaa
aaggcgaaagaacgatcgaaatcgcttggaaaaatcggaatgtctccatcgagagcaaag
ttctttgccgatcacgcgacactaccattttccagcgaaaatacaccgaaatctgacaaa
aagacagagaaaagtggatggtttaaaggaattgcgaacagtccaatgttcaaaatgatc
aaaagcaccactttcgactcccccaaaccgccttccgccgatagcagtgacgctggttcc
atcactggctcctccccatccttccattccgtcgtcactcagttcaaaaaaggatatgat
gacgtcatgccgtccagattccgtcttggtgtgaccactcttctcaacaaatctgttggt
gcgatgggaagcggaatgatttattcagatgaccgcacgtcgtccgagaatccatttttt
gtgaacgccaaggaccccgcctacgttctggattcaggcaacccgtgttgtctgctaaaa
gaagaatactggatgagagaggtctatttacagttgaaaaggagtagagaacgactggaa
aagggtcagaaatccatggaaagtacatcggaatcggctgaaaatgaggccgaaacactt
ccgttctcctctccaaaaaacgcggcgggaaaactcgaagtgattctatgcactgccacg
tattgtccatcatgtcacacaatggtttacgacgaggaaataatggctggatggaaagtt
gacgatcagaatctcaatacagtatgcccgcattgctctggaaatacaagtggagctacc
gacgccgtcgcgacaactgaaacgacgagtccggagagtgtgttcgcaccacgactaaaa
attcgaatgcgttggatcgatgagatgcgtaatagttggtatcagccaggaggacttcag
gagtcgaggaatgcgacgcccgaaaagacacctccaccgcccgaaacctgtcttgaagtc
gccttcgtgagccctctcgtcctccgtcgtgaactcgaaaccatcctcacattggacaaa
gacgcaatgagaaacgaatcgataaaaacgacgcaccccatcgtattctggaatttgatc
tactacttgcgtcgtctctctcttccttctcatttgttctcgtggatttctgaaagacat
cacatcagatgtgtattcgatattccaacgcaacacgatgaatcgattattccattgtat
ttctataatccgaatcatgatggaaatccggcattcggagaatttaatcagaaaattcag
agaagaactgatgatggaaaagagacgaatgcgtactcgtcatggaagttggtgacggat
tcagtgaataagaatttgctttttaaagccgtccaaacgctggttaactcgtcgagatta
gtgaagaacgggagtgttcatgttggagcacatttccctattttcagagacatccaattc
gcctcaatcgatctattcggtcgcgccctgctccgcgacgctttggacactcaatacgac
actgaatctaataaattgccgccaaaaatcaaagaaattcttcccctccaagatcatcca
ctatcccatgtcacaagagcgtgccgtaaagtttttatgccactcgacctattttaa

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