Caenorhabditis remanei (nematode): GCK72_016467
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Entry
GCK72_016467 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
GCK72_016467
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
crq01009
]
GCK72_016467
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crq03021
]
GCK72_016467
03019 Messenger RNA biogenesis [BR:
crq03019
]
GCK72_016467
03041 Spliceosome [BR:
crq03041
]
GCK72_016467
Enzymes [BR:
crq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
GCK72_016467
Protein phosphatases and associated proteins [BR:
crq01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
GCK72_016467
Transcription machinery [BR:
crq03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
GCK72_016467
Messenger RNA biogenesis [BR:
crq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
GCK72_016467
Spliceosome [BR:
crq03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
GCK72_016467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
9800038
NCBI-ProteinID:
XP_053580429
UniProt:
A0A6A5G5C0
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All DBs
Position
V:446284..448814
Genome browser
AA seq
300 aa
AA seq
DB search
MTEAEIRALCHKSREIFLSQPILLELEAPLKICGDIHGQYNDLLRLFEYGGFPPEANYLF
LGDYVDRGKQSLETICLLLAYKVKYPENFFLLRGNHECASINRIYGFYDECKRRFSIKLW
KTFTDCFNCLPIAALIDEKIFCCHGGLSPDLQNMEQIRRVMRPTDVPDTGLLCDLLWSDP
DKDVTGWGENDRGVSFTFGPDVVAKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSA
PNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQYQGMNSGRPAVGGGRPGTTAGKK
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggcagagattcgcgctctgtgtcacaagtctcgtgagatcttcctttcacaa
ccgattcttctggaacttgaagcgccgctgaagatttgtggagacatccacggacaatac
aacgatttgcttcgcctattcgagtacggaggattcccaccagaggccaactatctcttc
ctcggtgactacgttgatcgtggaaagcagagtttggagacgatctgcttgttgctcgcc
tacaaagtcaaatatccagagaactttttccttctccgcggaaatcacgagtgcgcttcg
atcaatcgtatatatggtttctatgatgaatgcaaaagacgtttctcgatcaaactgtgg
aagacgttcaccgattgcttcaattgtcttccgatagccgctctcatcgacgagaaaatc
ttctgttgccacggaggactctctcctgatcttcagaacatggaacagattcgtcgtgtg
atgcgaccgaccgacgtgccagacactggattgttgtgcgatttgttgtggtccgatccg
gataaggatgtgaccggatggggagaaaacgatcgaggcgtctcgttcacgttcggacca
gacgtcgtcgcgaaattcttgaatcgacacgatttggatctgatatgcagagcacatcaa
gttgtggaagatggatacgagttctttgcgaagagacaactcgtcacactattctcagcg
ccaaactattgcggagagttcgataatgcgggtggaatgatgagcgttgatgagacgtta
atgtgcagtttccagattctgaaaccatcagaaaagaaagccaagtatcaataccaggga
atgaacagtggacgaccggcggtgggcggaggacggcccggaacgactgctggaaagaag
taa
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