Caenorhabditis remanei (nematode): GCK72_016468
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Entry
GCK72_016468 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
GCK72_016468
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
crq01009
]
GCK72_016468
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crq03021
]
GCK72_016468
03019 Messenger RNA biogenesis [BR:
crq03019
]
GCK72_016468
03041 Spliceosome [BR:
crq03041
]
GCK72_016468
Enzymes [BR:
crq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
GCK72_016468
Protein phosphatases and associated proteins [BR:
crq01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
GCK72_016468
Transcription machinery [BR:
crq03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
GCK72_016468
Messenger RNA biogenesis [BR:
crq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
GCK72_016468
Spliceosome [BR:
crq03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
GCK72_016468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
9800040
NCBI-ProteinID:
XP_003101455
UniProt:
E3MQX7
LinkDB
All DBs
Position
V:468251..471130
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AA seq
349 aa
AA seq
DB search
MMRRKNSSSSFGELNIDQLISTLVAVKPWHKTLDVTENEIRMVCVLARQIFMHQPMLLEL
EPPLKIGGDIHGQFADLLRLFNLAGYPPESNYLFLGDYVDRGPKSIETIVLLLCYKIKYP
NNFFLLRGNHEVANLNRIYGFYDECKRRYSVKLWKCFQDVFNCMPVAALIDNKIFCCHGG
LSPNLRSLDQLKRLSRPCDVQETGLLCDVLWSDPDATVVGWAPNERGVSYVFGVDVLAQF
LQKMDLDIVVRGHQVVEDGYEFFGRRGLVTVFSAPNYCGEFDNAGAVMNVDENLLCSFQI
LKPQSQLVMDAALAEKQNNFVANLAGMANIKIEQKPAPMIQKRFRRGML
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgccgcaaaaactcatcttcaagcttcggagagctcaacatcgatcaactcatt
tcgacactggtggctgtgaagccgtggcacaagacactggatgtgacggagaacgagatc
cgaatggtttgcgtcttggcccgacagattttcatgcatcaaccgatgttgttggagttg
gaacctcctcttaagattggaggagacatccacggtcaattcgcagatcttcttcgccta
ttcaaccttgccggatatccaccagagtcaaattatctcttcctaggagattatgtagat
cgaggaccgaaaagtatcgagacgatcgtcctgttgttgtgctataaaatcaagtatccg
aacaactttttcctgttgcgtggcaatcacgaagtggccaacctcaataggatttatgga
ttttatgacgaatgcaaacggcgttacagtgtaaaactatggaaatgcttccaagacgtg
ttcaattgtatgccagtcgccgcactcatcgacaacaaaatcttctgttgccacggcggt
ctctcaccgaatcttcgctctctcgaccaactaaaacgcctttcccgtccatgtgatgtt
caggagactggtcttttgtgtgacgttctttggtcggatcccgatgcgactgtagttgga
tgggcgccaaatgagcggggtgtcagttatgtgttcggtgtggatgtgttggctcaattc
ctgcaaaaaatggatttggatatagttgtcagagggcatcaagtcgttgaggacggatat
gaattcttcggcagacgtggactggttacggtattctcagctcccaattactgtggagag
ttcgataatgcaggcgcagtgatgaatgtcgacgagaaccttttgtgctccttccagatc
ctaaaaccccaatcgcaacttgtcatggacgccgcgctagccgaaaaacagaataacttc
gtggcgaatctcgccggaatggcgaatataaagatagagcagaagccggcgccaatgatt
cagaaacgattccgacgtggaatgttgtaa
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