Caenorhabditis remanei (nematode): GCK72_017088
Help
Entry
GCK72_017088 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K10357
myosin V
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
GCK72_017088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crq03019
]
GCK72_017088
04131 Membrane trafficking [BR:
crq04131
]
GCK72_017088
03029 Mitochondrial biogenesis [BR:
crq03029
]
GCK72_017088
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
crq04812
]
GCK72_017088
Messenger RNA biogenesis [BR:
crq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
GCK72_017088
mRNA cycle factors
P-body specific factors
GCK72_017088
Membrane trafficking [BR:
crq04131
]
Others
Actin-binding proteins
Myosins
GCK72_017088
Mitochondrial biogenesis [BR:
crq03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
GCK72_017088
Cytoskeleton proteins [BR:
crq04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
GCK72_017088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
IQ
AAA_22
AAA_16
nSTAND3
Motif
Other DBs
NCBI-GeneID:
9797501
NCBI-ProteinID:
XP_053580793
LinkDB
All DBs
Position
V:3649460..3669990
Genome browser
AA seq
1356 aa
AA seq
DB search
MDGGATLGRGQVFSVQNYKKGARIWHRHPHLVWIGGVLEEDISFQTRQVRLKLEDDTTVE
YDITSLEQLPFLRNPAFLVGKDDLTLLSYLHEPAVLHNLQVRFVNSQSIYTYCGIVLVAI
NPYADCSHIYREEIIQVYQGAGKSAREMDPHIFAVAEEAHFDMGAFGKSQSIIVSGESGA
GKTVSAKFVMRYLASVAASRSRSDQGRTTIEARVLASNPIMESIGNAKTIRNDNSSRFGK
FIQINFCERGRRIIGAEMKTYLLEKSRLVFQAGGERNYHVFYQMCAARNHPVLKDLHLGP
CEAYGYLTQGGDSRIPGVDDRADFEELLKALQMLGFDGKQISEVFRLLAGLLLLGNVHFE
NGESSSAVSPESAQEISRLCREMWEISEGDLRVWLTRREIRAVNEVVTKPLTKNEAVRSR
DALTKMLYAHLFGWLVEKINEALNDKEKASSPSKKRSDRFIGVLDIYGFETFDINSFEQF
SINYANEKLQQQFNQHVFKLEQEEYVREEIEWVRVDFHDNQPAIDLIEGPVGMINLLDEQ
CKRLNGSDADWLSQLKNSTELKRNPQLAYPKVRSNDFIVRHFAADVTYSTDGFVEKNRDA
IGEQLLDVVVASRFQMMRTVIGPAAVSSGANGATGTPGKRTTKKTVASQFRDSLKELMQV
LCSTRPHYVRCIKPNDSKIEFEFEPKRAIQQLRACGVLETVRISAAGFPSRYPYEEFARR
YRVLYTKEAAIWRDSPKRFAELACQQCLEEGKYAVGKTKIFLRTGQVAVLERVRLDTLAV
AATMIQKTWKGFVARRKYETMRKSLLIVQASLKAFLAFRRIKYLQMHRAVITMQSATRGF
LERRNYERIRNATIGIQAAFKAQRVRRYVEKLRYEKSAITIQSAWRGYAARREQIAKRRK
VVMVQCAVRKWLAKRRLRELKIEARSVGHLQKLNTGLENKIIELQMRLDIANARTKEETE
KLTTKSKDLEKTKAELAMMEAERLTLLEARHRVEVLQEEVERLETECDLKEAQRGGMETK
VVDLQSRLEQMQSESGQAIAELTEQLEKARTDRQQWETERQKMEAELQTERAARHALDSE
VVAMREQLMKNVDLFESSTFQKRSSPKKLRDEDGCSRTTSNLSQLTGSFTAETAPRGSPE
SLLDNMAITFEQLRMINDLRQRNEHCQRETERMKAILEASTLIETLDKKTSLKAFESIRV
GELEGAYNRLKNDMERIVSGQNGATHSVFERIMEENERLRDEAVELRSMLSSHFERQSVA
GSSGYRRSPRPDSGHCSGADSEDGSSAADLEEDLCIERQCRHLKNLAENLTRMLTNQNLE
IERLQQQLRFSESQTVFRRHHPFPSASQADTFVTHK
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atggacggaggcgccactcttggcagaggccaagtattctcagtccaaaattataagaaa
ggagcccgaatctggcaccgacaccctcatctcgtatggatcggtggcgttctcgaagag
gatatcagttttcagacgagacaagtcagactgaaattggaggatgatacgacggtggag
tacgacatcacctccctggagcaacttccattcctccgaaaccccgcctttctcgtcgga
aaagatgatcttacgttgctctcgtatcttcacgagccggcggttctccacaatcttcaa
gtccgtttcgtgaatagtcaatcgatatacacttactgtggaatagtgctcgtcgcaatc
aatccatatgcagattgttctcacatctaccgagaggaaatcattcaagtatatcaagga
gccggaaaatcagcgagagaaatggatccacacatctttgcagtcgccgaggaggctcac
ttcgatatgggtgcattcggaaagagtcaatcgattattgtgagtggagagtctggagct
ggaaagacggtatctgccaagtttgtgatgagatatctggcttcggtggcggcgagtcga
tcgagaagtgatcagggacggacgacgattgaagcgagagttttggctagtaatcctatc
atggaatctattggaaatgccaagactatcagaaacgacaactcctctcgcttcggaaag
ttcatacaaatcaatttctgcgaacgtggccgtcgaatcatcggagcggaaatgaagacg
taccttctggagaagagtcgtctagtgttccaagcaggcggcgagcgaaattatcacgtc
ttctatcagatgtgcgccgcccgaaatcatccggtactcaaagatcttcatctgggaccg
tgcgaagcttacggatacttgactcaaggaggtgacagtcggattcctggagttgacgat
cgtgcagatttcgaggaacttctcaaagcgctccagatgctcggattcgatggaaaacag
atctccgaagtgttccgtcttctcgcaggtcttctacttctcggcaatgttcacttcgag
aatggagagtcgtcgtcggcagtgtcccctgaatccgctcaggaaatctcaagattgtgt
agagagatgtgggagattagcgaaggagatttgagagtttggctgacgagacgagagatt
cgagcggttaatgaagtcgtgacgaagccgttgacgaagaatgaagctgtgagatccagg
gatgctctcacgaagatgttatacgcgcatctgtttggatggctcgttgagaagattaat
gaggcgttgaatgacaaggaaaaggcgtcatcgccaagtaaaaaacgctccgatcgcttt
atcggcgtcctagatatctatggattcgagacgtttgatatcaactcattcgaacagttt
tccattaattacgccaacgagaaacttcaacaacaattcaatcaacacgttttcaagttg
gaacaagaggaatatgttcgggaggaaatcgaatgggtccgagtggatttccacgataat
cagccggcaatcgatctgattgagggaccagttggaatgatcaacttgctggatgagcag
tgtaaacgtttgaacgggagcgatgcggattggttgagtcagttgaagaatagtacggaa
ttgaagaggaatccacaattggcgtatccaaaagtgcggagtaacgattttattgtgaga
cactttgcggcggacgtcacttacagtactgatggatttgtggagaagaatcgggatgct
attggagagcaactgctggatgtagtggtggcgtcgaggtttcagatgatgagaactgtt
attggaccggctgccgtgtcttctggagcaaatggagccactggaacccctggaaaacgg
accaccaagaaaactgtcgctagtcaattcagggattcactgaaagagttgatgcaagtg
ctctgctcgacacgcccacattatgttagatgtatcaagccgaacgatagcaagattgaa
tttgagtttgagccgaagcgtgctatacaacaattgagagcttgtggagtcctcgaaacc
gtccgaatctccgcagccggattcccgtctcgctatccttatgaggaattcgcacgacga
taccgggtgctctacacgaaagaagcggcgatctggagggattcaccgaagagattcgca
gagttggcgtgtcaacagtgtctggaagagggaaaatatgctgtgggaaagacgaaaatc
ttcttgagaactggacaagttgcggtgctcgagcgagtccgattggatacccttgctgtt
gcggcgacgatgattcagaagacgtggaagggattcgtggcgagacgaaagtatgagacg
atgaggaaatctcttctgattgttcaagcttcactgaaggcgttcttggcgtttagaagg
atcaaatatctgcaaatgcatcgcgctgttattacaatgcaatcggctacccgtggattc
ttggagcgtcgaaattacgagagaattcgaaatgcgacgattggaattcaggcggcattt
aaagctcagagagtccgaagatatgtggagaaactgcgttacgagaagtcggcgatcaca
attcaatcggcgtggcgtggatacgcggcgagaagagagcaaattgcgaagagacggaag
gtggtcatggttcagtgtgctgttaggaaatggttggcgaagcgaaggttgagagaactc
aagatagaagcccgttcggtgggacatctccagaagttgaacactggtctcgagaataag
atcatcgagttgcagatgcgattggatattgctaacgcacgaaccaaagaagagacggag
aagttgacgacgaagagcaaggatctcgagaagacaaaggccgagttggccatgatggaa
gcggagagattgacgcttctcgaagcacgacaccgagtggaagtgcttcaggaggaggtg
gagcgacttgagacggaatgcgatctgaaagaggctcaacgtggtggaatggagacgaaa
gtggtggatttgcagagtcgattggaacagatgcaatcagaatctggacaagccatcgcc
gagctcacggagcaactcgagaaggcccgtaccgatcgtcagcaatgggagactgaacga
cagaagatggaggcggagttgcaaacggaacgcgccgcccgtcatgctctcgactcggaa
gtcgtcgcgatgagagaacagctgatgaagaatgttgatttgtttgagtcaagtacattc
cagaaaagatcgagtcccaagaagttgagagatgaggacggttgctcgaggaccacttcg
aatttgagtcagttgacaggctcgtttactgctgaaactgctccacgtggatcgcctgaa
tcccttcttgacaacatggctatcactttcgaacaactgagaatgatcaacgatttgcgg
caacgaaatgagcattgtcaacgagaaacggagcgaatgaaggcgattctcgaggcgtcc
actcttatcgagacgcttgataagaagacgtcactgaaggcgttcgaatcgattcgcgtt
ggagagctggagggagcttataataggcttaagaatgatatggaacgaattgttagcgga
cagaatggagcaactcattcggtgtttgagaggattatggaggagaacgagagattgagg
gatgaggctgtcgagttgagatccatgttgtctagtcattttgagagacaatctgtcgct
ggaagtagtggatatcggagatcaccgagacctgactcggggcattgctctggagcggat
tcggaggatggaagtagtgcggcggatttggaagaggatttgtgtattgagcggcagtgt
cgacatttgaagaatttggctgaaaacctcacccgtatgctcacaaatcaaaatctggaa
atcgaacgtcttcaacaacaacttcgtttcagcgaatcgcagactgtcttccgtcgacat
catccatttccttccgcctctcaagcagatacttttgttactcacaaatag
DBGET
integrated database retrieval system