KEGG   Caenorhabditis remanei (nematode): GCK72_017088
Entry
GCK72_017088      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K10357  myosin V
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:crq00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    GCK72_017088
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:crq03019]
    GCK72_017088
   04131 Membrane trafficking [BR:crq04131]
    GCK72_017088
   03029 Mitochondrial biogenesis [BR:crq03029]
    GCK72_017088
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:crq04812]
    GCK72_017088
Messenger RNA biogenesis [BR:crq03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Cargo complex
     GCK72_017088
   mRNA cycle factors
    P-body specific factors
     GCK72_017088
Membrane trafficking [BR:crq04131]
 Others
  Actin-binding proteins
   Myosins
    GCK72_017088
Mitochondrial biogenesis [BR:crq03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Retention of mitochondria
    GCK72_017088
Cytoskeleton proteins [BR:crq04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Myosins
     GCK72_017088
SSDB
Motif
Pfam: Myosin_head IQ AAA_22 AAA_16 nSTAND3
Other DBs
NCBI-GeneID: 9797501
NCBI-ProteinID: XP_053580793
LinkDB
Position
V:3649460..3669990
AA seq 1356 aa
MDGGATLGRGQVFSVQNYKKGARIWHRHPHLVWIGGVLEEDISFQTRQVRLKLEDDTTVE
YDITSLEQLPFLRNPAFLVGKDDLTLLSYLHEPAVLHNLQVRFVNSQSIYTYCGIVLVAI
NPYADCSHIYREEIIQVYQGAGKSAREMDPHIFAVAEEAHFDMGAFGKSQSIIVSGESGA
GKTVSAKFVMRYLASVAASRSRSDQGRTTIEARVLASNPIMESIGNAKTIRNDNSSRFGK
FIQINFCERGRRIIGAEMKTYLLEKSRLVFQAGGERNYHVFYQMCAARNHPVLKDLHLGP
CEAYGYLTQGGDSRIPGVDDRADFEELLKALQMLGFDGKQISEVFRLLAGLLLLGNVHFE
NGESSSAVSPESAQEISRLCREMWEISEGDLRVWLTRREIRAVNEVVTKPLTKNEAVRSR
DALTKMLYAHLFGWLVEKINEALNDKEKASSPSKKRSDRFIGVLDIYGFETFDINSFEQF
SINYANEKLQQQFNQHVFKLEQEEYVREEIEWVRVDFHDNQPAIDLIEGPVGMINLLDEQ
CKRLNGSDADWLSQLKNSTELKRNPQLAYPKVRSNDFIVRHFAADVTYSTDGFVEKNRDA
IGEQLLDVVVASRFQMMRTVIGPAAVSSGANGATGTPGKRTTKKTVASQFRDSLKELMQV
LCSTRPHYVRCIKPNDSKIEFEFEPKRAIQQLRACGVLETVRISAAGFPSRYPYEEFARR
YRVLYTKEAAIWRDSPKRFAELACQQCLEEGKYAVGKTKIFLRTGQVAVLERVRLDTLAV
AATMIQKTWKGFVARRKYETMRKSLLIVQASLKAFLAFRRIKYLQMHRAVITMQSATRGF
LERRNYERIRNATIGIQAAFKAQRVRRYVEKLRYEKSAITIQSAWRGYAARREQIAKRRK
VVMVQCAVRKWLAKRRLRELKIEARSVGHLQKLNTGLENKIIELQMRLDIANARTKEETE
KLTTKSKDLEKTKAELAMMEAERLTLLEARHRVEVLQEEVERLETECDLKEAQRGGMETK
VVDLQSRLEQMQSESGQAIAELTEQLEKARTDRQQWETERQKMEAELQTERAARHALDSE
VVAMREQLMKNVDLFESSTFQKRSSPKKLRDEDGCSRTTSNLSQLTGSFTAETAPRGSPE
SLLDNMAITFEQLRMINDLRQRNEHCQRETERMKAILEASTLIETLDKKTSLKAFESIRV
GELEGAYNRLKNDMERIVSGQNGATHSVFERIMEENERLRDEAVELRSMLSSHFERQSVA
GSSGYRRSPRPDSGHCSGADSEDGSSAADLEEDLCIERQCRHLKNLAENLTRMLTNQNLE
IERLQQQLRFSESQTVFRRHHPFPSASQADTFVTHK
NT seq 4071 nt   +upstreamnt  +downstreamnt
atggacggaggcgccactcttggcagaggccaagtattctcagtccaaaattataagaaa
ggagcccgaatctggcaccgacaccctcatctcgtatggatcggtggcgttctcgaagag
gatatcagttttcagacgagacaagtcagactgaaattggaggatgatacgacggtggag
tacgacatcacctccctggagcaacttccattcctccgaaaccccgcctttctcgtcgga
aaagatgatcttacgttgctctcgtatcttcacgagccggcggttctccacaatcttcaa
gtccgtttcgtgaatagtcaatcgatatacacttactgtggaatagtgctcgtcgcaatc
aatccatatgcagattgttctcacatctaccgagaggaaatcattcaagtatatcaagga
gccggaaaatcagcgagagaaatggatccacacatctttgcagtcgccgaggaggctcac
ttcgatatgggtgcattcggaaagagtcaatcgattattgtgagtggagagtctggagct
ggaaagacggtatctgccaagtttgtgatgagatatctggcttcggtggcggcgagtcga
tcgagaagtgatcagggacggacgacgattgaagcgagagttttggctagtaatcctatc
atggaatctattggaaatgccaagactatcagaaacgacaactcctctcgcttcggaaag
ttcatacaaatcaatttctgcgaacgtggccgtcgaatcatcggagcggaaatgaagacg
taccttctggagaagagtcgtctagtgttccaagcaggcggcgagcgaaattatcacgtc
ttctatcagatgtgcgccgcccgaaatcatccggtactcaaagatcttcatctgggaccg
tgcgaagcttacggatacttgactcaaggaggtgacagtcggattcctggagttgacgat
cgtgcagatttcgaggaacttctcaaagcgctccagatgctcggattcgatggaaaacag
atctccgaagtgttccgtcttctcgcaggtcttctacttctcggcaatgttcacttcgag
aatggagagtcgtcgtcggcagtgtcccctgaatccgctcaggaaatctcaagattgtgt
agagagatgtgggagattagcgaaggagatttgagagtttggctgacgagacgagagatt
cgagcggttaatgaagtcgtgacgaagccgttgacgaagaatgaagctgtgagatccagg
gatgctctcacgaagatgttatacgcgcatctgtttggatggctcgttgagaagattaat
gaggcgttgaatgacaaggaaaaggcgtcatcgccaagtaaaaaacgctccgatcgcttt
atcggcgtcctagatatctatggattcgagacgtttgatatcaactcattcgaacagttt
tccattaattacgccaacgagaaacttcaacaacaattcaatcaacacgttttcaagttg
gaacaagaggaatatgttcgggaggaaatcgaatgggtccgagtggatttccacgataat
cagccggcaatcgatctgattgagggaccagttggaatgatcaacttgctggatgagcag
tgtaaacgtttgaacgggagcgatgcggattggttgagtcagttgaagaatagtacggaa
ttgaagaggaatccacaattggcgtatccaaaagtgcggagtaacgattttattgtgaga
cactttgcggcggacgtcacttacagtactgatggatttgtggagaagaatcgggatgct
attggagagcaactgctggatgtagtggtggcgtcgaggtttcagatgatgagaactgtt
attggaccggctgccgtgtcttctggagcaaatggagccactggaacccctggaaaacgg
accaccaagaaaactgtcgctagtcaattcagggattcactgaaagagttgatgcaagtg
ctctgctcgacacgcccacattatgttagatgtatcaagccgaacgatagcaagattgaa
tttgagtttgagccgaagcgtgctatacaacaattgagagcttgtggagtcctcgaaacc
gtccgaatctccgcagccggattcccgtctcgctatccttatgaggaattcgcacgacga
taccgggtgctctacacgaaagaagcggcgatctggagggattcaccgaagagattcgca
gagttggcgtgtcaacagtgtctggaagagggaaaatatgctgtgggaaagacgaaaatc
ttcttgagaactggacaagttgcggtgctcgagcgagtccgattggatacccttgctgtt
gcggcgacgatgattcagaagacgtggaagggattcgtggcgagacgaaagtatgagacg
atgaggaaatctcttctgattgttcaagcttcactgaaggcgttcttggcgtttagaagg
atcaaatatctgcaaatgcatcgcgctgttattacaatgcaatcggctacccgtggattc
ttggagcgtcgaaattacgagagaattcgaaatgcgacgattggaattcaggcggcattt
aaagctcagagagtccgaagatatgtggagaaactgcgttacgagaagtcggcgatcaca
attcaatcggcgtggcgtggatacgcggcgagaagagagcaaattgcgaagagacggaag
gtggtcatggttcagtgtgctgttaggaaatggttggcgaagcgaaggttgagagaactc
aagatagaagcccgttcggtgggacatctccagaagttgaacactggtctcgagaataag
atcatcgagttgcagatgcgattggatattgctaacgcacgaaccaaagaagagacggag
aagttgacgacgaagagcaaggatctcgagaagacaaaggccgagttggccatgatggaa
gcggagagattgacgcttctcgaagcacgacaccgagtggaagtgcttcaggaggaggtg
gagcgacttgagacggaatgcgatctgaaagaggctcaacgtggtggaatggagacgaaa
gtggtggatttgcagagtcgattggaacagatgcaatcagaatctggacaagccatcgcc
gagctcacggagcaactcgagaaggcccgtaccgatcgtcagcaatgggagactgaacga
cagaagatggaggcggagttgcaaacggaacgcgccgcccgtcatgctctcgactcggaa
gtcgtcgcgatgagagaacagctgatgaagaatgttgatttgtttgagtcaagtacattc
cagaaaagatcgagtcccaagaagttgagagatgaggacggttgctcgaggaccacttcg
aatttgagtcagttgacaggctcgtttactgctgaaactgctccacgtggatcgcctgaa
tcccttcttgacaacatggctatcactttcgaacaactgagaatgatcaacgatttgcgg
caacgaaatgagcattgtcaacgagaaacggagcgaatgaaggcgattctcgaggcgtcc
actcttatcgagacgcttgataagaagacgtcactgaaggcgttcgaatcgattcgcgtt
ggagagctggagggagcttataataggcttaagaatgatatggaacgaattgttagcgga
cagaatggagcaactcattcggtgtttgagaggattatggaggagaacgagagattgagg
gatgaggctgtcgagttgagatccatgttgtctagtcattttgagagacaatctgtcgct
ggaagtagtggatatcggagatcaccgagacctgactcggggcattgctctggagcggat
tcggaggatggaagtagtgcggcggatttggaagaggatttgtgtattgagcggcagtgt
cgacatttgaagaatttggctgaaaacctcacccgtatgctcacaaatcaaaatctggaa
atcgaacgtcttcaacaacaacttcgtttcagcgaatcgcagactgtcttccgtcgacat
catccatttccttccgcctctcaagcagatacttttgttactcacaaatag

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