Caenorhabditis remanei (nematode): GCK72_017320
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Entry
GCK72_017320 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GCK72_017320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crq03009
]
GCK72_017320
Ribosome biogenesis [BR:
crq03009
]
Eukaryotic type
Pre-60S particles
RNases
GCK72_017320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
9826747
NCBI-ProteinID:
XP_053580938
UniProt:
A0A6A5G8E1
LinkDB
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Position
V:4749098..4754473
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AA seq
606 aa
AA seq
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MAKREMRKSLKWDIDNLFKSPETAEAEFQQAIKRRKLDDGTSSTPPRVRSDPRDALKPKL
SLHLTRLGDGHRLDYLANLIHYCIFGSKSIQKPRWATISQHRYLLQTLVVRVNVEDNFFA
TTNLKFLNEFFDRHWLELGADISDRRLFWNSLMNVRLDLKEQIKRKTDRMQKTFDLLGKF
DRSHFVLTTEQMAERNFPFPGEEGIVATKMRYKKITHSSPLYSVDCEMCETTHANRELTR
ISLIDEKQNTILDTLVKPRGDITDYVTRYSGITAEMMEGVTTTLEDVQRAIQNLLPPDAI
LVGHSLEHDLGAMKMTHPFCLDVCHSLNYTNNVFENRNSLKSLTEMFLGEQIQTEYGHCS
YEDAWAALRLAQLKIQEGIVFGVASYGWKYSQYREEQKLKNGDGEILKLTQNSAAAPIPC
TGCLGPTVVGCTVVNCRCRFVAGPAQCVACCVRNLVSEEGDFDWRETLEVDLEMERVTSP
IENYVKKDKMKSVLMGFEAPEVLEKMPEMGRKIHLKLPSSFPTYSSFIDNVASEMLNDSA
IFIEIDRKKVEPLPRSSPEDDEGEVVDNSEALNEILEKLVAATTKNAAIMMIFSSPSKNT
LFKNIK
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacgagaaatgcggaagagtctaaaatgggatattgacaatttattcaagtca
ccggagaccgcggaggcggagtttcagcaagcgatcaaacgacgaaaactggacgatggc
acgtcttcaacaccgccaagagttcgatccgacccgcgggatgctctgaaaccgaagcta
tcgttacatttgacaagattaggcgatggacatcgattagattaccttgctaacctcatt
cattactgtattttcggctcaaaatcgatacaaaaaccgcgatgggcaacaatatctcag
cataggtatcttctacagacactggtggttcgagtcaatgtggaagacaactttttcgcc
accacaaatctgaaatttctcaacgagtttttcgatagacactggctagagctcggcgcg
gatatcagtgatcgtcgactcttctggaattctttaatgaatgttcgattggatttaaag
gagcagattaagaggaaaactgacagaatgcaaaagacatttgatctactcggaaagttc
gatagaagtcatttcgtgttgacgactgagcagatggctgaaaggaatttcccgtttcct
ggggaggagggcattgtggcgacgaaaatgagatacaaaaagatcactcactcctcaccg
ctctactctgtcgattgcgagatgtgtgagacgactcacgcgaatcgagaactcactcga
atctcgctcatcgacgagaaacaaaacacaattctggatacgttagtgaaaccacgtgga
gacattactgattacgtcacacggtactcgggaataacggcggagatgatggaaggtgtg
acgactacattagaagacgtgcagcgtgcgattcagaatctgttaccgccggatgcgatt
ctagtgggacactcgctagagcacgatttgggtgccatgaaaatgactcatccgttttgt
ttagatgtttgtcactcgttgaattacacaaataacgtgtttgagaaccggaatagtttg
aaaagtctgacggaaatgtttctcggcgaacagattcaaacggaatacggacactgctcc
tatgaggatgcatgggcggctctgagacttgctcaactcaaaattcaagagggaattgtg
tttggagtggcgagttatggatggaaatactcgcagtatagagaggaacaaaagctgaaa
aatggggatggggaaatcttaaaattgactcaaaactccgcagcagccccgatcccctgc
accggatgccttgggcctactgtagtcgggtgtactgtagtcaattgtagatgtcgtttc
gtggcgggacccgcgcaatgtgtcgcgtgttgcgtgagaaatttggtgtcagaagaggga
gatttcgattggagagagactttagaggtggatttggagatggaacgagtcacgagtccc
attgagaattatgtgaagaaagataagatgaaatcggttttgatgggttttgaggcgcct
gaagtgttggagaagatgcccgagatgggaaggaaaatccacttgaaactgccctcctca
ttccccacttactcttcattcatcgacaacgttgcctccgaaatgctcaatgacagtgcc
atattcatagaaatcgataggaaaaaagtggaaccattgcccagaagttctccagaagat
gacgagggagaagtcgtcgacaattcagaagctctcaacgagattctcgaaaaacttgtg
gcggcgaccactaaaaacgcggctatcatgatgatcttctcgagtcccagcaagaatact
ctttttaagaatatcaagtga
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