Caenorhabditis remanei (nematode): GCK72_017330
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Entry
GCK72_017330 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K24814
HEAT repeat-containing protein 5
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crq04131
]
GCK72_017330
Membrane trafficking [BR:
crq04131
]
Endosome - Golgi transport
Others
Aftiphilin/p200/gamma-synergin complex
GCK72_017330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laa1_Sip1_HTR5
HEAT_EZ
Adaptin_N
Cnd1
Motif
Other DBs
NCBI-GeneID:
9826787
NCBI-ProteinID:
XP_053580942
UniProt:
A0A6A5G8E8
LinkDB
All DBs
Position
V:4782750..4795584
Genome browser
AA seq
1847 aa
AA seq
DB search
MDETHSLLLNEEALEACPEQKRPVFIYEWLRYLDRILPITQREDLKNVQKELQRQLESRL
YTVVGPPTRKLLTRCIARVYALTGDIASMNNLLNLCNDSLKSKDESPKTVQNKLADLSCL
AALYDSMGRMAGRSIEDTLAISKNWMGTAVAHSQAHIMNTLTSMVKALGSGDSVTHKKIH
SIAKSSLQDRTLCKTPHVKIASLECLTALVPFYTPLYVTELEASCTMCIKVLEGSTYELR
CAVAKFMAQLLATSMKPPPGAVTKGKSNQMIPVRPASVTDTLNLLASGFLRGGIGGFLKT
SSSTFATMGRSDIRIGVSICYVEMVREMGSVWLEKHLNAVCSHMVDLASKCGHLAYTQNA
SHIAEALIIRRCIAFILRQTIGSLLGENAQTLACKHLGVLLSQYVDLVSIGTGDNLDSSV
DSSDYGSGYAVIVILQEISVLVRQIGSSVMSLFTEATGIMENIFKCLTHPLASARYSAAW
CLRCIATAVPNLMTPLIDRCLPRLDQMSSSSRAISGFSMALAALLAASNDSSKLGIPYAK
PLKVLDLAEEMLRTATQQPKLTIAKLESGWNLINSLIHLGPSVMKEHLPRVIKLWKAAFP
RSSREAETENNRGDAFSWQCAMVAQAGALSVMEAVASQPELCSTGSALEAMKVPIECSLV
MMSQVGNLIKSYGNEMRQANSIVRIRLYRLLLLLPHKSFEGSYVALLRELVADITLSDNS
QSAMTTSLPMTQFTGVEKILISPLYNATDYSMVEDLLQTPISSVSIGNVEEDLSNLIRSS
ASQIGDTWPENDSESLTCLNTSLLTYGKVFPLVNNKHKLQITNHFFDTIQNATKNVARRQ
AIFVNVLTAKLLAYKTLCEQRGPKLENEELQKSSFRLISTSLSNSCPMTRLIGAEAMARL
AQAVGSPQYVAETAQYCFGMLNSCKDETNRCGHVLALGCLHRHVGSLGSGQHLNTGVSVV
LALAEENKMPKVQTSALVAMALIAETGSGMFRVFVETTLSSCLKLLISTPTFVVDVVQGI
SKCLTALITCVGPELSCPGVIDGVRTSLLAACAIQLSHSDPFVQAEAISGLQQMHLFAPR
YVHMAQLVIDISSLLSSTHLVIRKQAVSCLRQLVQRESKEVRNHAQILVPQGIVETNKKK
FALPETGLEGALFGMLDTETNKELRIHLQETLISLVQGTSGELLNNWLMLCKEILATSND
HGGLARKKEEKKEKLEEDADDDDDEDGDDDTNLAGISSLMEEDKGKVQPRWPTKVFTMEI
VNRLMSVCDTERAHLDMALAKELQITSGGKNDYLVLHLSDLVRMSFMAATSDNSLLRIAG
LKSLEEVIIRFSSCPEPEFPGHMILEQFQAQVGAALRPAFTDDTPSNVTSVACQVCSTWI
GSGVARDLNDLKRVHQLLVSSLNKLKHGSINVQLYSESAATLEKLSILKAWAEVYVTAIE
QDRMKNENEEARDHYEYNGSGSLLSLVEPETNSLIAYWLATLNDAALLALPGHYSEQFLS
RGGAFFNAHSAEACREYYQLCWPPILLACSTWLSKHNFELPSGIELSPETASVWRDDGNI
SRFYLLIGIAVESLSNKTRQIEDETIQMSVKSLTRLLSCEWCQMNLMSDTAAVIEILYVL
HRSVLTRDCLTTQLQCIECVRSIIDAAQLSMRICASRDISNGNLENADSLRKIPNVLFAG
EEGGNDGQIINKDGVKTISYAILELAVCAIFKQMPQINSAQLKTNSLAALHLRKVGRLPA
ESTHLVIKSMQILVQIPSLCSPQARITLLPVVMYLLIGFIRETARLDEGSIQADRAGHLS
AIAAAAIQSIRNIVSQPPGDETENSWKTIMRNAFYSVLNMAEGFDEI
NT seq
5544 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaacccacagtcttctactaaacgaggaggctctcgaggcgtgtcccgagcaa
aaacggccagttttcatatacgaatggctccgatatctcgatcgaatacttccgatcact
cagagagaagatctcaaaaatgtgcaaaaagagttgcagagacagctcgaatcgcggctc
tacacggtcgttggaccgccgacgagaaaacttttgacaagatgcattgccagggtgtac
gcgttgactggagatattgcgtcgatgaataatctgttgaatttgtgtaatgactcgttg
aagagtaaggatgagtcgccgaagactgtacagaataaattagcggatctgtcatgcctg
gcagctctctacgattcaatgggtcgaatggcgggtcgatcgatagaagacacgctggca
atctccaaaaactggatgggaacagcggtggctcatagtcaagctcacataatgaacacc
ctgacgagtatggtgaaagcactgggttccggtgactcggtgactcacaagaagattcat
tccattgcgaaaagctcacttcaagaccgtactctctgcaagacaccacacgtgaagatc
gcctcgttggagtgtctcacagcactcgtcccgttctacacgccactttatgtcaccgaa
ttggaagcgagttgtacgatgtgtatcaaagttttagagggatccacgtatgagttgaga
tgcgcggtcgccaagtttatggcacagttgttggccacttcgatgaaaccaccgcctggt
gcggttactaaaggaaaatccaaccaaatgataccagtccgtcctgcgtctgtcacggac
accctaaacctcctggcatctggattcttacgaggtggaatcggtggattcctgaaaacc
agctcctcaacgttcgcaacaatgggacgatccgatattcggattggagttagcatatgc
tacgtggaaatggtcagagaaatgggatcggtgtggttggagaagcatttgaatgcagtt
tgttctcatatggtggatttggcgtcgaaatgcggtcatctcgcatatacacaaaacgcc
tcccacatcgcggaagcgctcatcatccgccgctgcatcgcgttcatcctccgtcaaacc
atcggatcgctcctcggagagaacgcccaaactctcgcatgcaaacatctcggagtcctc
ctatcccaatacgtggatctcgtcagtatcggcacaggagacaatttggactcctccgtg
gatagcagtgattatggaagtggatacgctgtcattgtcatcctacaggagatttcagtt
ctcgttcgacaaatcggatcgtcggtgatgtcgttgttcacagaagccactggaatcatg
gagaacatcttcaagtgtctgacacacccactggcatctgctaggtactctgctgcgtgg
tgtcttcgatgtatagcgacggctgttccgaatctaatgactccactgatcgatcggtgc
cttccacgactcgatcaaatgtcatctagctctagagctatcagtggattctcaatggct
cttgctgctctgttagccgcttcgaatgacagttctaaactgggaattccatatgcaaaa
cctctgaaagtgttggatcttgctgaagaaatgctgagaactgccactcaacaacccaag
ctaacaatagcgaaactagaatccggatggaatcttatcaactctcttatccatttggga
ccgtctgttatgaaagaacatctgccacgtgtcattaagttgtggaaagcggcgtttccg
agaagttcgagagaagcggagacggagaataatcggggtgatgcgttcagttggcaatgt
gcaatggtggcacaggcgggcgcgttgtcggtgatggaagcggtggcttctcaaccggag
ttgtgctcaacggggagtgcgctcgaagcgatgaaagtaccgattgagtgtagtttggtg
atgatgtcgcaagtgggaaatctcatcaaaagttacggaaacgagatgagacaagccaac
tcgatcgttcgtatccgtctctaccgtctcctcctccttctcccccataaaagtttcgag
ggaagctacgtggcactgctccgagagctcgtcgccgatatcactctgtcagataactcg
cagagtgcaatgaccacttcactgccgatgactcagttcacgggcgttgagaagattctg
atctcaccgttgtataatgcgaccgactattcgatggtcgaggatttgcttcaaacccca
atctcatctgtctcaatcggcaacgtcgaggaggatctctccaatctgatccgctcctcc
gcctcccaaatcggtgacacgtggcctgaaaatgattcagaatctctgacatgtctcaac
acgtcacttctaacctatggaaaagtgttcccactggtcaataataagcacaaactacaa
atcaccaatcacttcttcgatacgattcagaatgcgacgaagaacgtggcgagacgacag
gcgatctttgtcaatgtgctcaccgctaaactattggcttacaagacgctctgtgagcaa
cgcgggccgaaattggagaacgaagagctccagaagtcatcgttccgactcatcagtaca
tccctctcgaattcgtgtccgatgactcgactcatcggagcagaagcgatggctcgactg
gcgcaagctgttggctcaccgcaatacgtggcagaaaccgcacagtattgtttcggaatg
ctcaatagttgtaaagatgaaacgaatcgatgtggacatgtgttggcactcggatgtctt
catcgccacgtgggatctctcggtagtggacaacatttgaatacgggtgtctcagtggtt
ctagcactcgccgaggagaataaaatgccaaaagtgcagacgagtgcgttggtggcgatg
gcgttgattgcggagacgggtagtggaatgttccgagtgtttgtggagactacgttgagc
tcgtgcttgaaattgttgatatccacgcccacttttgttgtggatgtcgtgcaggggatt
agtaaatgtctcaccgctctcatcacctgcgtcggtccggaactcagctgtcccggtgtc
atcgatggtgtccgaacttcgctcctcgccgcgtgtgctatccaactctcgcattccgat
ccgttcgtccaagccgaagccatctcaggactccaacaaatgcatttattcgctccgaga
tatgttcatatggctcaactcgtcatcgatatcagctcattgctctcatctactcatctg
gtcattcggaaacaagcggttagctgtttgagacaactggtgcaacgagaatcgaaagaa
gtcagaaaccacgctcagatactggttccccagggaatcgttgagacgaataagaagaag
ttcgcgctgccggagactggattagagggcgctctgttcggaatgctagacacagaaacc
aataaagagttgagaattcatcttcaggagacgttgatctcactggtccaagggacgtct
ggagagcttctgaataactggttgatgttgtgcaaagagattctggcgacgtccaacgat
cacggaggattggcgaggaagaaggaggaaaagaaggagaaattggaggaagatgcggat
gatgatgacgatgaggatggggatgacgacacgaatctagctggaattagttcactgatg
gaggaggataaggggaaggtgcaaccgagatggccgacgaaagttttcacgatggagatt
gtgaatcgactgatgagtgtatgcgatacggaacgagctcatctagatatggcactggct
aaagagcttcaaattacgtccggagggaagaatgactatctggtgttgcatttgtcggat
cttgttagaatgtcttttatggcagcgacatctgacaactcgctgcttcgaattgctggg
ttgaagtctttggaggaagtcattataagattctcgtcatgcccggagccagaattcccg
ggacacatgatactggagcagtttcaagctcaagttggcgctgcactccgcccagcgttc
actgatgacacacctagtaatgtcacctcggtggcatgccaagtgtgtagtacgtggatt
ggtagtggtgttgcgcgggatttaaatgatttgaaaagagtgcaccagctacttgtatca
tctctgaataagctgaaacatgggagtatcaatgtccaattgtatagtgaaagtgcggcg
acactggagaagttgtcgattttgaaggcgtgggcggaggtttatgtgacggcgattgag
caagatcgaatgaagaatgagaacgaagaagcgagagatcactatgagtataatggaagt
ggatccttgttatcccttgtggaacctgaaaccaactctctaatagcctactggctggca
accctgaatgacgcggcacttctcgcgcttcccggtcactattccgagcaatttttgagt
cgaggcggtgcatttttcaatgcgcacagtgcagaagcgtgccgggaatactaccaactg
tgctggccaccgatcctcctcgcttgctctacatggctatccaaacacaacttcgagctg
ccatccggaatcgaattgtcgccagaaaccgcatcggtgtggagagatgacggcaacatc
tccagattctacctgctcatcgggattgcggtggagtctctgagcaacaaaacacgacaa
attgaagatgagactatacaaatgtcggtgaaatcgctgactcgattactgtcttgcgag
tggtgtcagatgaatttgatgagtgacaccgcggcggtcattgagatattgtatgtgtta
catcgaagtgttttgacaagagattgcttaaccacccaactacaatgtatcgaatgcgtg
aggtctatcatcgatgcggcacaactttctatgagaatctgtgcgtcgagagatatatca
aatgggaatctggagaatgcggatagccttaggaagattccgaatgtcttgtttgctgga
gaggaaggtggaaatgatggacagattattaataaggatggcgtgaagactatcagttat
gctatcctggaattggcggtttgtgccatattcaagcagatgccgcaaatcaactcggca
caacttaaaaccaattctcttgcggcgttacacctcaggaaggttggacgactccctgcg
gaatccactcatttggtcattaaaagtatgcaaatcctggtacaaatcccttctctatgc
tcaccgcaagcccggataacactcctacccgttgtgatgtacttgttgattggattcatt
cgagagaccgcccgtctcgatgagggatccattcaagcggatcgagccggacatttgtcg
gcgatcgccgctgccgccatacaatcgattcggaatattgtgagccaaccgcccggtgat
gagacggagaatagttggaagacgattatgaggaatgcgttctattcggtgttgaatatg
gcggaaggtttcgatgaaatctga
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integrated database retrieval system
