Caenorhabditis remanei (nematode): GCK72_017379
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Entry
GCK72_017379 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GCK72_017379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crq03009
]
GCK72_017379
Ribosome biogenesis [BR:
crq03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
GCK72_017379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
GCD14
Motif
Other DBs
NCBI-GeneID:
9811332
NCBI-ProteinID:
XP_003093867
UniProt:
E3NCK3
LinkDB
All DBs
Position
V:4978954..4980175
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AA seq
357 aa
AA seq
DB search
MGRPEFNRGGSGGFRGGRGGDRGGGRGGFGGGGRGGFGGGDRVGYGGDRGGFGGDRGGFR
GGRGGGDRGGFRGGRGGGDRGGFGGRGSPRGGFGGRGSPRGGRGSPRGGRGGAGGMRGGK
TVVVEPHRLGGVFIVKGKEDALATKNMVVGESVYGEKRVSVDDGAGSIEYRVWNPFRSKL
AASIMGGLEDTHIKPGTKLLYLGAASGTTVSHCSDVVGPEGIVYAVEFSHRSGRDLLGVA
KKRPNVVPIVEDARHPHKYRMLVGMVDVIFSDVAQPDQARIVALNAQNFLKNGGHAVISI
KANCIDSTAEPEAVFAGEVNKLKEEKFKPLEQVTLEPYERDHAVVVAVYRPVKGKKN
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgggacgtccagagttcaatcgtggaggcagtggaggattccgaggaggacgcggaggt
gaccgtggaggaggtcgtggtggatttggaggcggtggccgtggaggcttcggcggagga
gatcgcgttggttatggaggagaccgcggaggattcggtggagaccgtggcggcttcaga
ggaggtcgtggcgggggtgatcgcggaggattccgtggtggaagaggaggtggtgaccgt
ggcggtttcggaggacgtggatctccaagaggtggtttcggtggacgcggatccccaaga
ggaggacgtggatctccacgtggtggacgcggtggagccggaggaatgcgcggaggaaag
accgttgtcgtcgagccacatcgtctcggaggagtcttcatcgtgaaaggaaaggaggat
gccctcgccaccaagaacatggtcgtcggagaatccgtatacggagagaagagagtctct
gtcgatgatggagccggttcgattgagtaccgtgtgtggaatccattccgttctaagctc
gccgcttccatcatgggaggtctcgaggacacacacatcaagccaggaaccaagcttctc
tacctcggagctgcttccggaacaacagtttcccattgctcagacgttgttggaccagaa
ggaatcgtctacgctgtcgagttctcgcacagatctggacgtgatcttttgggagtcgcc
aagaagagaccgaatgttgttccaatcgtcgaggacgctaggcatccacacaaatatcgc
atgcttgttggaatggtcgatgtcatcttctctgatgtcgctcaaccagatcaagctcgt
attgttgccctcaacgcacaaaacttccttaaaaacggtggacatgccgtcatctccatc
aaagctaactgcattgacagcacagccgagccagaggccgtcttcgccggagaagtcaac
aagttgaaggaggagaagttcaagccactcgagcaggtcacactggaaccatacgagaga
gaccacgctgtcgtggttgctgtctatcgcccagtcaaaggaaagaagaactga
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