Caenorhabditis remanei (nematode): GCK72_017436
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Entry
GCK72_017436 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K05656
ATP-binding cassette, subfamily B (MDR/TAP), member 9
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq02010
ABC transporters
crq04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GCK72_017436
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
GCK72_017436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crq04131
]
GCK72_017436
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crq02000
]
GCK72_017436
Membrane trafficking [BR:
crq04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
GCK72_017436
Transporters [BR:
crq02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
GCK72_017436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_16
AAA_30
RsgA_GTPase
AAA_29
SbcC_Walker_B
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
9797563
NCBI-ProteinID:
XP_053581000
UniProt:
A0A6A5G871
LinkDB
All DBs
Position
V:complement(5374277..5377568)
Genome browser
AA seq
801 aa
AA seq
DB search
MPPLLLKLLMLLHVIFDVTFTLFSLGFYSPGWNFNLNDISKTFHFAHYSYWTSPLDYVVL
CLLRQVSLLIAIIIITRGKSKKLKKWMLVYDILGILGYMVAVVKLLAFDETAEIMKYPGV
FMSTGSAVFLTFSLPFAIRQTLLTKDSEEEGYERLQNENQENASVENGTATTSSGTSNAP
TSATTSSESTDDKEEEDAVSKEEKEKRLPLSKHLWQIVKLCGKQWKWFTAAYSLLLIDCI
LNLIEPALYSQMMSTAIQMKSFDILKKACLILAIVQFSEATCNTVRYICMQYAERLTARN
IRVGLFRAILHQDISFFDENKTGQLMSRITHDSESISNSLPVYIETTTNNLFMLFGSAPI
MFYYSWQLSISTFITFPITLLMTKYYGLFVEKLSEKENDATAVSNETVEEVLSAIRTVRS
FAAEKMEHMRYTKNTDAWFKISIKSVVVGTFYNYFWATMWNIEDVVIYLYGGYLTLNGRM
APEALLTYVFYHWRLHAALNAFSSLFSDVMKTIGSSRKVIHIMNRHPELDYEIGTETPEV
VGNIIFEDVEFAYPTRKTANVLNGISLSCEPGKTIALVGPSGNGKSTLVSLIQQFYAPQS
GRILLDGTPIHNIDHHHYHTKIALVAQEPTLFSGTIRENILYGIENGTDEDMMRVSEMAN
VHEFVSKMEKGYDTKCGEKGVQMSGGQKQRIAIARALIRNPRVLILDEATSALDSESESM
VQEALNRCARERTVVVIAHRLSTVRSADRIAVIEKGNVTEMGNHEELMKNPDGLYYKLVS
KQLAPMELKKVEEEKPIVDFF
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgccaccgttactcctaaaattattgatgcttctgcatgttatatttgacgtcaccttc
actttattctcactcggattctattcacccggatggaatttcaacttgaatgacatctcc
aaaaccttccattttgctcattattcatattggacatctccattggactacgttgtgtta
tgtctgttgcgtcaagtgtctctactcattgcaattataattattactcgtggaaaatca
aagaaattgaaaaaatggatgttggtgtacgatattctcggaattctcggatacatggta
gctgttgtgaaactgttagcattcgatgagaccgctgaaatcatgaaatatccaggtgtc
tttatgagcactgggtctgcagttttcctgacgttttctcttccatttgctattcgacag
acattattgactaaagacagcgaagaggaaggttatgagaggttgcaaaatgaaaatcag
gagaacgcaagtgtagaaaatggtactgctaccacctctagtggcacatccaatgccccc
acatctgccactacatcttctgaatctactgacgacaaagaagaagaagatgcagtttca
aaagaagaaaaagagaaacgtcttccgttgtcaaaacatctctggcagattgtcaagttg
tgtggaaaacaatggaagtggttcacggctgcatactcgcttttgctgattgattgtatt
ttgaaccttatcgaaccagccttgtacagtcaaatgatgtccacagccatccaaatgaaa
tcttttgatatcctcaaaaaagcttgcctcatcctagcgattgtccaattctcggaagcc
acgtgtaacactgtcagatacatttgcatgcagtacgcagaacgactgactgctcgtaat
attcgtgtcggcctattccgtgcaattcttcatcaggatatctctttttttgatgaaaac
aaaacggggcaactcatgtccagaattactcatgactctgaatcgatttccaactctctt
ccggtttatatcgaaaccaccaccaataaccttttcatgttgtttggatccgctccgatc
atgttctattactcatggcagctgtccatcagtacatttatcacattcccaattactctt
ctcatgacaaaatattacggattgtttgttgagaagttgtctgaaaaggagaacgacgcg
actgcagtatccaatgagactgtcgaagaagtgttgtcagccatccgaactgttcgatca
tttgccgcagagaagatggagcacatgagatataccaaaaatacggatgcctggtttaag
atcagtatcaagagcgtcgtcgttggtaccttctacaattacttctgggccaccatgtgg
aatatcgaagatgttgttatttatttgtacggtggatacttgacattgaatggacgaatg
gctccagaagcacttctcacttatgtcttctatcattggagacttcatgctgcactcaat
gcattcagttctctcttttctgatgtcatgaagactatcggatcctccagaaaagtcatt
catatcatgaatcgccatcctgaactcgactacgaaatcggaacagagactccagaagtc
gtcggtaacatcatctttgaagacgtggagtttgcataccccacaaggaaaactgccaac
gttttgaatggaatcagtttgtcgtgtgaaccagggaaaacgattgcattggttggaccg
agtggaaacggaaagtctacacttgtctccttgattcaacagttctatgctccacaatct
ggaagaattcttctcgatggaacaccaattcacaatattgatcatcatcattaccacact
aaaatcgccctcgttgcccaagaaccaactctattttctggaacaatccgtgagaatatc
ctatatggaatagagaatggaacagatgaagacatgatgagagtgtctgaaatggcaaat
gttcacgaatttgtgtcgaagatggagaagggatacgacacaaaatgtggagagaaggga
gtccagatgtccggagggcagaagcagcgtatcgccattgcccgagcactcatccgtaat
ccacgtgttctaattctcgacgaagccacgtcagcattagactcagaatccgagtcaatg
gttcaagaagcgttgaatcgatgtgcccgtgaacgaactgtcgtagtgattgctcatcgt
ctctcaacagtgagaagtgccgatcgaattgctgtaattgagaagggaaatgtgacagaa
atggggaatcacgaggagttgatgaagaatccagatggtctctattacaaattggtcagc
aaacaattggcaccgatggagctgaaaaaggtggaagaggagaagcctattgttgatttc
ttctaa
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