KEGG   Caenorhabditis remanei (nematode): GCK72_017436
Entry
GCK72_017436      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K05656  ATP-binding cassette, subfamily B (MDR/TAP), member 9
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq02010  ABC transporters
crq04142  Lysosome
Brite
KEGG Orthology (KO) [BR:crq00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    GCK72_017436
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    GCK72_017436
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:crq04131]
    GCK72_017436
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:crq02000]
    GCK72_017436
Membrane trafficking [BR:crq04131]
 Endosome - Lysosome transport
  Others
   Lysosomal membrane proteins
    GCK72_017436
Transporters [BR:crq02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB2, 3, 8, 9, 10 subgroups
    GCK72_017436
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N AAA_22 ABC_ATPase AAA_16 AAA_30 RsgA_GTPase AAA_29 SbcC_Walker_B Mg_chelatase
Other DBs
NCBI-GeneID: 9797563
NCBI-ProteinID: XP_053581000
UniProt: A0A6A5G871
LinkDB
Position
V:complement(5374277..5377568)
AA seq 801 aa
MPPLLLKLLMLLHVIFDVTFTLFSLGFYSPGWNFNLNDISKTFHFAHYSYWTSPLDYVVL
CLLRQVSLLIAIIIITRGKSKKLKKWMLVYDILGILGYMVAVVKLLAFDETAEIMKYPGV
FMSTGSAVFLTFSLPFAIRQTLLTKDSEEEGYERLQNENQENASVENGTATTSSGTSNAP
TSATTSSESTDDKEEEDAVSKEEKEKRLPLSKHLWQIVKLCGKQWKWFTAAYSLLLIDCI
LNLIEPALYSQMMSTAIQMKSFDILKKACLILAIVQFSEATCNTVRYICMQYAERLTARN
IRVGLFRAILHQDISFFDENKTGQLMSRITHDSESISNSLPVYIETTTNNLFMLFGSAPI
MFYYSWQLSISTFITFPITLLMTKYYGLFVEKLSEKENDATAVSNETVEEVLSAIRTVRS
FAAEKMEHMRYTKNTDAWFKISIKSVVVGTFYNYFWATMWNIEDVVIYLYGGYLTLNGRM
APEALLTYVFYHWRLHAALNAFSSLFSDVMKTIGSSRKVIHIMNRHPELDYEIGTETPEV
VGNIIFEDVEFAYPTRKTANVLNGISLSCEPGKTIALVGPSGNGKSTLVSLIQQFYAPQS
GRILLDGTPIHNIDHHHYHTKIALVAQEPTLFSGTIRENILYGIENGTDEDMMRVSEMAN
VHEFVSKMEKGYDTKCGEKGVQMSGGQKQRIAIARALIRNPRVLILDEATSALDSESESM
VQEALNRCARERTVVVIAHRLSTVRSADRIAVIEKGNVTEMGNHEELMKNPDGLYYKLVS
KQLAPMELKKVEEEKPIVDFF
NT seq 2406 nt   +upstreamnt  +downstreamnt
atgccaccgttactcctaaaattattgatgcttctgcatgttatatttgacgtcaccttc
actttattctcactcggattctattcacccggatggaatttcaacttgaatgacatctcc
aaaaccttccattttgctcattattcatattggacatctccattggactacgttgtgtta
tgtctgttgcgtcaagtgtctctactcattgcaattataattattactcgtggaaaatca
aagaaattgaaaaaatggatgttggtgtacgatattctcggaattctcggatacatggta
gctgttgtgaaactgttagcattcgatgagaccgctgaaatcatgaaatatccaggtgtc
tttatgagcactgggtctgcagttttcctgacgttttctcttccatttgctattcgacag
acattattgactaaagacagcgaagaggaaggttatgagaggttgcaaaatgaaaatcag
gagaacgcaagtgtagaaaatggtactgctaccacctctagtggcacatccaatgccccc
acatctgccactacatcttctgaatctactgacgacaaagaagaagaagatgcagtttca
aaagaagaaaaagagaaacgtcttccgttgtcaaaacatctctggcagattgtcaagttg
tgtggaaaacaatggaagtggttcacggctgcatactcgcttttgctgattgattgtatt
ttgaaccttatcgaaccagccttgtacagtcaaatgatgtccacagccatccaaatgaaa
tcttttgatatcctcaaaaaagcttgcctcatcctagcgattgtccaattctcggaagcc
acgtgtaacactgtcagatacatttgcatgcagtacgcagaacgactgactgctcgtaat
attcgtgtcggcctattccgtgcaattcttcatcaggatatctctttttttgatgaaaac
aaaacggggcaactcatgtccagaattactcatgactctgaatcgatttccaactctctt
ccggtttatatcgaaaccaccaccaataaccttttcatgttgtttggatccgctccgatc
atgttctattactcatggcagctgtccatcagtacatttatcacattcccaattactctt
ctcatgacaaaatattacggattgtttgttgagaagttgtctgaaaaggagaacgacgcg
actgcagtatccaatgagactgtcgaagaagtgttgtcagccatccgaactgttcgatca
tttgccgcagagaagatggagcacatgagatataccaaaaatacggatgcctggtttaag
atcagtatcaagagcgtcgtcgttggtaccttctacaattacttctgggccaccatgtgg
aatatcgaagatgttgttatttatttgtacggtggatacttgacattgaatggacgaatg
gctccagaagcacttctcacttatgtcttctatcattggagacttcatgctgcactcaat
gcattcagttctctcttttctgatgtcatgaagactatcggatcctccagaaaagtcatt
catatcatgaatcgccatcctgaactcgactacgaaatcggaacagagactccagaagtc
gtcggtaacatcatctttgaagacgtggagtttgcataccccacaaggaaaactgccaac
gttttgaatggaatcagtttgtcgtgtgaaccagggaaaacgattgcattggttggaccg
agtggaaacggaaagtctacacttgtctccttgattcaacagttctatgctccacaatct
ggaagaattcttctcgatggaacaccaattcacaatattgatcatcatcattaccacact
aaaatcgccctcgttgcccaagaaccaactctattttctggaacaatccgtgagaatatc
ctatatggaatagagaatggaacagatgaagacatgatgagagtgtctgaaatggcaaat
gttcacgaatttgtgtcgaagatggagaagggatacgacacaaaatgtggagagaaggga
gtccagatgtccggagggcagaagcagcgtatcgccattgcccgagcactcatccgtaat
ccacgtgttctaattctcgacgaagccacgtcagcattagactcagaatccgagtcaatg
gttcaagaagcgttgaatcgatgtgcccgtgaacgaactgtcgtagtgattgctcatcgt
ctctcaacagtgagaagtgccgatcgaattgctgtaattgagaagggaaatgtgacagaa
atggggaatcacgaggagttgatgaagaatccagatggtctctattacaaattggtcagc
aaacaattggcaccgatggagctgaaaaaggtggaagaggagaagcctattgttgatttc
ttctaa

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