Caenorhabditis remanei (nematode): GCK72_017593
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Entry
GCK72_017593 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crq03021
]
GCK72_017593
Transcription machinery [BR:
crq03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
GCK72_017593
TFIIIC, fungi type
GCK72_017593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_8
TPR_1
TPR_2
TPR_14
TPR_11
TPR_19
TPR_6
TPR_CcmH_CycH
TPR_10
TPR_12
ARM_TT21
TPR_9
DUF5113
NatA_aux_su
ARM_TT21_C
DUF7017
TPR_21
YdjC
Motif
Other DBs
NCBI-GeneID:
9810780
NCBI-ProteinID:
XP_053581072
UniProt:
A0A6A5G8G5
LinkDB
All DBs
Position
V:5947675..5951093
Genome browser
AA seq
1029 aa
AA seq
DB search
MDQPSTSNSRPEEEEYGNILEHDDDFPEEEEYDHSQDLDDGTIAGVDIKPHLATLGRVDE
GGNDHAAPALEDEDLVNAINMFMRNEYDYDQFMRVTGGQTLREELGTKRKRPAPDDMDEE
GEEIDTAEDDEDDEDEDRELMGEVEDMPHPNYMDEPPSGVDRYNALPEEARYIMTQLMSG
ERRPAEETSSPLNLAEALKNQFDRNSEERAAPLKQVKLEPHGGEASSSTAPAESHRDRKK
GKRLDSLLGMANVYAAQGNITGAMELLREVIRTDHRHAVAYQQIATVYEQEGDREKALQF
GLLASHLNPKTPADDWVHWGDEANKLGRIEEAAVCYDRAIHLNNENWQYYEKRIEMLDQL
NLRPLAMKTRLQAAQLINNEILQVDFQWFRELIRKVAQYYITMNDEDKAIQSLEAFVLRS
REFGENAEAQHDTLVGMYIARKKFQQAGKSILSLCEGVRALFMPSKEPACLITYTNGTYE
CIPFPPIGNVQYEIVEQAFPVRMHCHLVFCLFSLNEIEQSSDLEAKLLNRTFEMEEDEAC
LLDVPRLYKNQGNPKFAMKFLEKLSDNPSYKYEESGAYWYLKGTLEMGQKNDAAAMEAFN
KVLLLQPDHVDNRIHLSTLQQKAGLFDAALETLENYDLEVGSALPDERLLARRSDVLFES
GDSDQFVRITRMMLAPHFYRVYVAPEVLKKRRVAKGKLTTPALSNTLKTCAFNVIKHTNW
ERLVKRLGAMVEANGVYTTTLTGTDIHDYCLKLIECLNKMEKHQDALIVCCYAFLHPTLF
KADKTTTFQNLVYYCAIKARCWNLAFEYVRFYYTFALMVPTEPENAKHADMLQKRLFNAM
NYVFVNSQNVCYHRFIMRALVKNKDNHALQAISGNNSLITGTYRHAMGEYLRVWVNNRRN
PLICLLLALTFTHMSCKKDLSSRHLIGIRGIAFMKKYSRVRTCNQEVYYNIGRMFHQMSI
LPLAKHFYDKVLHAAPPNVFAFDDDGNEIIVPAEKYDLRKMAAHNLALIYRTSGNHYAAR
AIYEKYLVV
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaccgtcaacatcgaatagtcgaccggaagaggaggaatatggaaatattctg
gagcacgacgatgactttccagaagaagaggaatacgatcatagtcaagatttggatgac
ggaacgatagctggagttgatattaaaccgcatttagcgactctaggacgggtagacgaa
ggaggaaatgatcatgctgcgccggctttagaagatgaggatttagtcaatgccatcaac
atgttcatgagaaacgagtacgattatgatcaattcatgagagtcaccggtgggcaaacg
ttgcgagaagagttgggaacgaaacggaaacgtccagctccagatgatatggacgaagag
ggagaggagatcgacacggctgaagacgatgaggatgatgaggatgaagatagagaactg
atgggagaagtggaagatatgccacatcctaattatatggatgagccgccttcaggcgta
gatagatataatgcacttccagaagaagctagatacattatgacacagttaatgtccggt
gagagacgtccagctgaggaaacttcatcacctctaaacttggctgaggcgttgaaaaat
caattcgatcgaaatagcgaagaacgcgctgcaccattgaaacaggtgaagttggagcct
catggtggagaagccagctcgtcaactgctccagcagaaagtcatcgtgatcgtaagaag
ggaaaacgattggattcgctacttggaatggccaatgtctatgcagcacaaggaaacatc
actggtgctatggaattgcttcgagaagtcattcgtactgatcacagacatgccgtcgcc
tatcaacagattgcgacagtctatgaacaagagggtgatcgcgagaaagcacttcaattc
ggattgttggcgtctcatctgaatccaaaaacccccgccgatgactgggttcattgggga
gatgaagcgaacaaactgggaagaatagaggaagctgccgtctgttacgatagagctatt
catttgaacaatgagaactggcagtattacgagaaaagaatcgaaatgcttgatcaactg
aatctgagaccattggcaatgaagacgcgccttcaagcagcacaattgattaataatgag
attttgcaagtcgattttcagtggttccgtgaattgattcgtaaagttgctcaatattat
atcaccatgaatgatgaagataaggcgattcaatcgttggaagctttcgtattgcggagt
agagagttcggagaaaatgcagaagctcaacatgatactctcgttggaatgtatattgcg
agaaagaagtttcaacaagctggtaaatcgattctttcgttgtgtgaaggagtgagagct
ctctttatgccttccaaagagcctgcatgcttgatcacctacacaaacggaacatatgaa
tgtatcccattcccaccgatcggaaatgtacaatacgaaatcgttgagcaagcgttccca
gttcgaatgcattgtcatctcgttttctgtctcttcagtctcaatgagattgagcagtca
tctgatttggaggcaaaacttttgaatagaacgttcgagatggaagaagacgaggcgtgt
ttgctggacgttcctaggctttacaagaatcaaggaaatccgaagtttgcgatgaaattc
ctcgagaaattaagtgataacccaagctacaagtatgaggagtctggagcgtactggtat
ttgaagggaacgctcgagatgggacagaagaatgacgcagcagctatggaggcattcaac
aaagtgttgctgttgcaaccggatcatgtagacaatcgaattcatctctccactcttcaa
caaaaagcgggactgtttgatgcagctcttgaaactctcgaaaattacgatctggaagtt
ggatcagctctaccggacgaacgtcttctcgctcgtcgatctgatgtacttttcgagtcg
ggagactctgaccaattcgttcgtatcacacgaatgatgctcgctccacacttttataga
gtgtatgtagctcctgaagtgctcaagaagcgtcgtgtggcaaaaggaaaattaacaact
cctgctctgagcaacactttgaagacatgtgcattcaacgtgattaagcataccaactgg
gagcgtttagtgaaacgactcggagccatggttgaagcaaatggagtctacactacaaca
cttacaggaactgatatacacgactactgtctcaaattgatcgaatgcttgaataaaatg
gagaaacatcaagacgctctcattgtctgttgctatgcattccttcatccaacacttttc
aaagctgataaaacaactacattccaaaatctagtatactactgcgctattaaagctcgt
tgttggaatctagcttttgaatatgtccggttctactacactttcgctttgatggttccc
actgaacctgaaaacgcgaagcacgccgatatgcttcaaaagagacttttcaatgcgatg
aactacgtttttgttaattctcaaaacgtctgctaccaccgtttcatcatgagagctctc
gtaaagaacaaggataatcacgcacttcaagcgatctctggaaataactcattgattact
ggaacttatcgacacgcgatgggagaataccttcgtgtttgggtgaacaacagacggaac
ccactcatttgtctcttactcgcactcactttcactcacatgtcgtgcaaaaaagatctc
tcaagtcgacatctcatcggaattcgaggaatcgcattcatgaaaaagtactcgagagta
cgaacttgcaatcaagaagtctattacaacattggaagaatgtttcatcaaatgtcaatt
cttcctcttgccaaacacttttacgataaagttcttcatgcggctcctccgaatgtgttc
gctttcgacgatgatggcaacgagattattgttcccgcagaaaaatacgatctgagaaaa
atggctgctcacaacttggcccttatctacagaacctctggaaatcactacgctgcacgg
gcaatttatgaaaaatatctcgttgtttga
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integrated database retrieval system