KEGG   Caenorhabditis remanei (nematode): GCK72_017593
Entry
GCK72_017593      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K15201  general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
crq  Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:crq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:crq03021]
    GCK72_017593
Transcription machinery [BR:crq03021]
 Eukaryotic type
  RNA polymerase III system
   Basal transcription factors
    TFIIIC
     GCK72_017593
    TFIIIC, fungi type
     GCK72_017593
SSDB
Motif
Pfam: TPR_8 TPR_1 TPR_2 TPR_14 TPR_11 TPR_19 TPR_6 TPR_CcmH_CycH TPR_10 TPR_12 ARM_TT21 TPR_9 DUF5113 NatA_aux_su ARM_TT21_C DUF7017 TPR_21 YdjC
Other DBs
NCBI-GeneID: 9810780
NCBI-ProteinID: XP_053581072
UniProt: A0A6A5G8G5
LinkDB
Position
V:5947675..5951093
AA seq 1029 aa
MDQPSTSNSRPEEEEYGNILEHDDDFPEEEEYDHSQDLDDGTIAGVDIKPHLATLGRVDE
GGNDHAAPALEDEDLVNAINMFMRNEYDYDQFMRVTGGQTLREELGTKRKRPAPDDMDEE
GEEIDTAEDDEDDEDEDRELMGEVEDMPHPNYMDEPPSGVDRYNALPEEARYIMTQLMSG
ERRPAEETSSPLNLAEALKNQFDRNSEERAAPLKQVKLEPHGGEASSSTAPAESHRDRKK
GKRLDSLLGMANVYAAQGNITGAMELLREVIRTDHRHAVAYQQIATVYEQEGDREKALQF
GLLASHLNPKTPADDWVHWGDEANKLGRIEEAAVCYDRAIHLNNENWQYYEKRIEMLDQL
NLRPLAMKTRLQAAQLINNEILQVDFQWFRELIRKVAQYYITMNDEDKAIQSLEAFVLRS
REFGENAEAQHDTLVGMYIARKKFQQAGKSILSLCEGVRALFMPSKEPACLITYTNGTYE
CIPFPPIGNVQYEIVEQAFPVRMHCHLVFCLFSLNEIEQSSDLEAKLLNRTFEMEEDEAC
LLDVPRLYKNQGNPKFAMKFLEKLSDNPSYKYEESGAYWYLKGTLEMGQKNDAAAMEAFN
KVLLLQPDHVDNRIHLSTLQQKAGLFDAALETLENYDLEVGSALPDERLLARRSDVLFES
GDSDQFVRITRMMLAPHFYRVYVAPEVLKKRRVAKGKLTTPALSNTLKTCAFNVIKHTNW
ERLVKRLGAMVEANGVYTTTLTGTDIHDYCLKLIECLNKMEKHQDALIVCCYAFLHPTLF
KADKTTTFQNLVYYCAIKARCWNLAFEYVRFYYTFALMVPTEPENAKHADMLQKRLFNAM
NYVFVNSQNVCYHRFIMRALVKNKDNHALQAISGNNSLITGTYRHAMGEYLRVWVNNRRN
PLICLLLALTFTHMSCKKDLSSRHLIGIRGIAFMKKYSRVRTCNQEVYYNIGRMFHQMSI
LPLAKHFYDKVLHAAPPNVFAFDDDGNEIIVPAEKYDLRKMAAHNLALIYRTSGNHYAAR
AIYEKYLVV
NT seq 3090 nt   +upstreamnt  +downstreamnt
atggaccaaccgtcaacatcgaatagtcgaccggaagaggaggaatatggaaatattctg
gagcacgacgatgactttccagaagaagaggaatacgatcatagtcaagatttggatgac
ggaacgatagctggagttgatattaaaccgcatttagcgactctaggacgggtagacgaa
ggaggaaatgatcatgctgcgccggctttagaagatgaggatttagtcaatgccatcaac
atgttcatgagaaacgagtacgattatgatcaattcatgagagtcaccggtgggcaaacg
ttgcgagaagagttgggaacgaaacggaaacgtccagctccagatgatatggacgaagag
ggagaggagatcgacacggctgaagacgatgaggatgatgaggatgaagatagagaactg
atgggagaagtggaagatatgccacatcctaattatatggatgagccgccttcaggcgta
gatagatataatgcacttccagaagaagctagatacattatgacacagttaatgtccggt
gagagacgtccagctgaggaaacttcatcacctctaaacttggctgaggcgttgaaaaat
caattcgatcgaaatagcgaagaacgcgctgcaccattgaaacaggtgaagttggagcct
catggtggagaagccagctcgtcaactgctccagcagaaagtcatcgtgatcgtaagaag
ggaaaacgattggattcgctacttggaatggccaatgtctatgcagcacaaggaaacatc
actggtgctatggaattgcttcgagaagtcattcgtactgatcacagacatgccgtcgcc
tatcaacagattgcgacagtctatgaacaagagggtgatcgcgagaaagcacttcaattc
ggattgttggcgtctcatctgaatccaaaaacccccgccgatgactgggttcattgggga
gatgaagcgaacaaactgggaagaatagaggaagctgccgtctgttacgatagagctatt
catttgaacaatgagaactggcagtattacgagaaaagaatcgaaatgcttgatcaactg
aatctgagaccattggcaatgaagacgcgccttcaagcagcacaattgattaataatgag
attttgcaagtcgattttcagtggttccgtgaattgattcgtaaagttgctcaatattat
atcaccatgaatgatgaagataaggcgattcaatcgttggaagctttcgtattgcggagt
agagagttcggagaaaatgcagaagctcaacatgatactctcgttggaatgtatattgcg
agaaagaagtttcaacaagctggtaaatcgattctttcgttgtgtgaaggagtgagagct
ctctttatgccttccaaagagcctgcatgcttgatcacctacacaaacggaacatatgaa
tgtatcccattcccaccgatcggaaatgtacaatacgaaatcgttgagcaagcgttccca
gttcgaatgcattgtcatctcgttttctgtctcttcagtctcaatgagattgagcagtca
tctgatttggaggcaaaacttttgaatagaacgttcgagatggaagaagacgaggcgtgt
ttgctggacgttcctaggctttacaagaatcaaggaaatccgaagtttgcgatgaaattc
ctcgagaaattaagtgataacccaagctacaagtatgaggagtctggagcgtactggtat
ttgaagggaacgctcgagatgggacagaagaatgacgcagcagctatggaggcattcaac
aaagtgttgctgttgcaaccggatcatgtagacaatcgaattcatctctccactcttcaa
caaaaagcgggactgtttgatgcagctcttgaaactctcgaaaattacgatctggaagtt
ggatcagctctaccggacgaacgtcttctcgctcgtcgatctgatgtacttttcgagtcg
ggagactctgaccaattcgttcgtatcacacgaatgatgctcgctccacacttttataga
gtgtatgtagctcctgaagtgctcaagaagcgtcgtgtggcaaaaggaaaattaacaact
cctgctctgagcaacactttgaagacatgtgcattcaacgtgattaagcataccaactgg
gagcgtttagtgaaacgactcggagccatggttgaagcaaatggagtctacactacaaca
cttacaggaactgatatacacgactactgtctcaaattgatcgaatgcttgaataaaatg
gagaaacatcaagacgctctcattgtctgttgctatgcattccttcatccaacacttttc
aaagctgataaaacaactacattccaaaatctagtatactactgcgctattaaagctcgt
tgttggaatctagcttttgaatatgtccggttctactacactttcgctttgatggttccc
actgaacctgaaaacgcgaagcacgccgatatgcttcaaaagagacttttcaatgcgatg
aactacgtttttgttaattctcaaaacgtctgctaccaccgtttcatcatgagagctctc
gtaaagaacaaggataatcacgcacttcaagcgatctctggaaataactcattgattact
ggaacttatcgacacgcgatgggagaataccttcgtgtttgggtgaacaacagacggaac
ccactcatttgtctcttactcgcactcactttcactcacatgtcgtgcaaaaaagatctc
tcaagtcgacatctcatcggaattcgaggaatcgcattcatgaaaaagtactcgagagta
cgaacttgcaatcaagaagtctattacaacattggaagaatgtttcatcaaatgtcaatt
cttcctcttgccaaacacttttacgataaagttcttcatgcggctcctccgaatgtgttc
gctttcgacgatgatggcaacgagattattgttcccgcagaaaaatacgatctgagaaaa
atggctgctcacaacttggcccttatctacagaacctctggaaatcactacgctgcacgg
gcaatttatgaaaaatatctcgttgtttga

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