Caenorhabditis remanei (nematode): GCK72_017660
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Entry
GCK72_017660 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K13114
pinin
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03013
Nucleocytoplasmic transport
crq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GCK72_017660
03015 mRNA surveillance pathway
GCK72_017660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crq03019
]
GCK72_017660
03041 Spliceosome [BR:
crq03041
]
GCK72_017660
Messenger RNA biogenesis [BR:
crq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
GCK72_017660
Spliceosome [BR:
crq03041
]
Complex C
Other components
EJC/TREX
GCK72_017660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
RSB_motif
Motif
Other DBs
NCBI-GeneID:
9810514
NCBI-ProteinID:
XP_053581106
UniProt:
A0A6A5G8E2
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All DBs
Position
V:6180919..6182229
Genome browser
AA seq
364 aa
AA seq
DB search
MEKMFVEDLDSDINAARDKLRNIDEKVTTLNGRPPRQRISYNDEPEEAPLRNVGRDAFGL
KDEASPWTTRREVEAPAGIRKRISIEDRIDRRGAGGRQSFDNQKRQRPDYLDNEADEEEF
GKRQKRSLQSTVVMPALDSKGREEKIEKLKETENKDSKQRNRRLFSSLVMGTLTSFKKTE
KKTAQQEKQEEVEKRLEETKKKDLESRREEKHELLNKRREQEKELQGLQRKKAMIQYAEQ
HVNQLKLMKGWIKTSTSPHIFWQPVKHTVRSLELKQATERQLDDQIVERQEKLKRDLEER
GRNVSESQGDHQDDEGEDDEYEDDGEEKNENEDIEVVLKTEDDLKREAEDEEKEDDIDVH
VELD
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggagaagatgttcgttgaagatctcgattcggatataaatgccgcacgagacaagctg
agaaatatcgatgaaaaagtgacaacgttgaacggaagacctccgcgacaacgtatttcg
tataacgatgagccagaagaggccccactcaggaatgtcggtcgtgatgctttcgggctg
aaagatgaagcaagtccctggacgactcgtagagaagttgaagcaccagctggaattcgt
aaaagaatcagcatcgaagacaggattgatcggcgcggtgcgggtggacgtcagagcttc
gacaatcagaaacgacaacgcccggattatttggacaatgaagctgacgaagaggaattc
ggaaagcgtcagaagcggtcacttcagtctactgttgtgatgccagctttggattcaaaa
ggaagagaggagaagatagaaaagttgaaagaaaccgagaataaagacagtaagcaaaga
aatcggcgcttattctcaagtttggtgatgggaactttgacgtctttcaagaaaactgaa
aagaagactgctcagcaagagaaacaagaggaagttgagaaacgactcgaagaaacgaaa
aagaaggacttggaatcgagacgcgaagagaaacacgaacttctgaacaagcgacgtgaa
caagagaaagaattgcaaggattacagcgaaagaaggctatgattcagtacgctgaacaa
catgtcaatcagttgaagcttatgaagggttggataaagacatcaacaagtccacatatc
ttctggcaaccagtgaagcacacagttcgttcattggaattgaagcaagcaacagagagg
caactcgacgatcaaattgtcgaacggcaagagaagttgaaaagggatctggaggaacga
ggcagaaatgtatcggagagtcaaggagatcaccaagatgacgaaggagaggacgacgaa
tacgaggatgatggcgaagagaaaaatgagaatgaggatattgaagtggtgttaaaaact
gaagatgatttgaaaagagaggcagaagatgaggagaaagaggatgatattgatgttcac
gttgagctcgattga
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