KEGG   Caenorhabditis remanei (nematode): GCK72_017660
Entry
GCK72_017660      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K13114  pinin
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq03013  Nucleocytoplasmic transport
crq03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:crq00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    GCK72_017660
   03015 mRNA surveillance pathway
    GCK72_017660
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:crq03019]
    GCK72_017660
   03041 Spliceosome [BR:crq03041]
    GCK72_017660
Messenger RNA biogenesis [BR:crq03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     GCK72_017660
Spliceosome [BR:crq03041]
 Complex C
  Other components
   EJC/TREX
    GCK72_017660
SSDB
Motif
Pfam: Pinin_SDK_memA RSB_motif
Other DBs
NCBI-GeneID: 9810514
NCBI-ProteinID: XP_053581106
UniProt: A0A6A5G8E2
LinkDB
Position
V:6180919..6182229
AA seq 364 aa
MEKMFVEDLDSDINAARDKLRNIDEKVTTLNGRPPRQRISYNDEPEEAPLRNVGRDAFGL
KDEASPWTTRREVEAPAGIRKRISIEDRIDRRGAGGRQSFDNQKRQRPDYLDNEADEEEF
GKRQKRSLQSTVVMPALDSKGREEKIEKLKETENKDSKQRNRRLFSSLVMGTLTSFKKTE
KKTAQQEKQEEVEKRLEETKKKDLESRREEKHELLNKRREQEKELQGLQRKKAMIQYAEQ
HVNQLKLMKGWIKTSTSPHIFWQPVKHTVRSLELKQATERQLDDQIVERQEKLKRDLEER
GRNVSESQGDHQDDEGEDDEYEDDGEEKNENEDIEVVLKTEDDLKREAEDEEKEDDIDVH
VELD
NT seq 1095 nt   +upstreamnt  +downstreamnt
atggagaagatgttcgttgaagatctcgattcggatataaatgccgcacgagacaagctg
agaaatatcgatgaaaaagtgacaacgttgaacggaagacctccgcgacaacgtatttcg
tataacgatgagccagaagaggccccactcaggaatgtcggtcgtgatgctttcgggctg
aaagatgaagcaagtccctggacgactcgtagagaagttgaagcaccagctggaattcgt
aaaagaatcagcatcgaagacaggattgatcggcgcggtgcgggtggacgtcagagcttc
gacaatcagaaacgacaacgcccggattatttggacaatgaagctgacgaagaggaattc
ggaaagcgtcagaagcggtcacttcagtctactgttgtgatgccagctttggattcaaaa
ggaagagaggagaagatagaaaagttgaaagaaaccgagaataaagacagtaagcaaaga
aatcggcgcttattctcaagtttggtgatgggaactttgacgtctttcaagaaaactgaa
aagaagactgctcagcaagagaaacaagaggaagttgagaaacgactcgaagaaacgaaa
aagaaggacttggaatcgagacgcgaagagaaacacgaacttctgaacaagcgacgtgaa
caagagaaagaattgcaaggattacagcgaaagaaggctatgattcagtacgctgaacaa
catgtcaatcagttgaagcttatgaagggttggataaagacatcaacaagtccacatatc
ttctggcaaccagtgaagcacacagttcgttcattggaattgaagcaagcaacagagagg
caactcgacgatcaaattgtcgaacggcaagagaagttgaaaagggatctggaggaacga
ggcagaaatgtatcggagagtcaaggagatcaccaagatgacgaaggagaggacgacgaa
tacgaggatgatggcgaagagaaaaatgagaatgaggatattgaagtggtgttaaaaact
gaagatgatttgaaaagagaggcagaagatgaggagaaagaggatgatattgatgttcac
gttgagctcgattga

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