Caenorhabditis remanei (nematode): GCK72_017969
Help
Entry
GCK72_017969 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K08492
syntaxin 18
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq04130
SNARE interactions in vesicular transport
crq04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
GCK72_017969
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
GCK72_017969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crq04131
]
GCK72_017969
Membrane trafficking [BR:
crq04131
]
SNARE
Syntaxin (Qa)
Stx-rER
GCK72_017969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
LMBR1
DUF6586
MCU
PRIMA1
Fusion_gly
Motif
Other DBs
NCBI-GeneID:
9824214
NCBI-ProteinID:
XP_053581243
UniProt:
A0A6A5G9Y5
LinkDB
All DBs
Position
V:complement(7569622..7572076)
Genome browser
AA seq
529 aa
AA seq
DB search
MDAQGDAGAQGGSQGPRPSNKRLQQTQAQVDEVVGIMKVNVEKVLERDQKLSQLDDRADA
LQEGASQFEKSAATLKRKYWWKNIKMMIIMCAIVVILIIIIVLWAGKMAVENPPFSDRSE
QFRSLATSIEQKHIRRHNEKPGVSRRDENRPSPAFTNISNVVYPLATEMYIFRKKLEERS
QDYIFATPAYSKMSSEERESFDADVKEKLSQFESFINQLGQRVNSNDGLRNATERGHLTR
VQEGLRTYLKEIVDFVSLLKKEHLRRLQAKNRSLADDVKEAKKDGHVFKYLSGLDELLYN
SDLEFSPKLIDKLQKLSTKHPCLQYKPQQETSLDRDYDLVEDITSLTGKREEFQTDDGWD
GIDELELDDAPKPQRQEPSKENRASPILFNETVRNRRRAGFEPEQDQLRDSYERWKSDQG
DQFAEQFQQQTAIIKEEFVKADRDDEIEKLEQQISEIQSLSSVFSEKIMDQERDIDLIND
LALHTSENLIDGNEWIRKAITNSAFQRVWFLFCIVVLTFTLLFLDWYNP
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggacgctcaaggagatgccggtgcgcagggtggaagtcaaggaccacgaccatcgaac
aagcgccttcagcagacacaagctcaggttgacgaggtcgtcggaatcatgaaggtgaat
gtggagaaggttttggagcgtgatcagaaactctcgcaattggacgaccgagctgatgct
cttcaagagggtgcctcgcaattcgaaaaatcggctgctactctgaagcgtaaatactgg
tggaagaacatcaagatgatgatcatcatgtgcgccatcgtcgtcatcctcatcatcatc
atcgttttgtgggccggaaaaatggcggtggaaaaccccccgttctccgatagatcggag
caatttagatcgcttgcgacatcaatcgagcagaaacacattagaagacacaatgaaaag
ccaggagtttctcgtcgagatgaaaaccgtccgtcgccagcctttacaaacatttctaat
gtagtctatccgcttgccactgaaatgtatatttttcgtaaaaagcttgaagaacgttcg
caagactacattttcgctactccagcatactcaaaaatgagttcagaagagcgagaaagc
ttcgatgctgatgtgaaagagaagttatcccaattcgagtcgttcatcaatcagctcggt
cagcgtgtgaatagcaatgacggattgcgaaatgcgacagaaagaggacatctcacgaga
gttcaagagggattgagaacatatctgaaagaaatcgtcgattttgtgtctcttttgaaa
aaggagcacttgagacggctacaagcgaaaaatcggtcgctggctgatgatgtgaaggaa
gcgaagaaagatgggcatgttttcaagtatctttccggactcgacgaactgctttacaat
tcggatctcgaatttagtccgaaattgattgacaagcttcaaaaactgtctacgaaacat
ccttgcctccagtacaaaccacagcaagaaacatctttagaccgtgattacgatcttgtg
gaagatataacaagcctaacaggaaaacgtgaagaatttcagacagacgatggatgggat
ggaatcgatgagttggagcttgacgatgctccaaaaccgcagagacaagagccatcaaaa
gagaatcgtgcatcaccaattctgttcaatgaaactgttcgaaatagacgccgtgctgga
tttgaaccagaacaagatcagctacgagatagttatgaaagatggaaaagtgatcaaggc
gatcaatttgctgaacaattccagcaacagactgcaattatcaaagaagaatttgtgaaa
gcagatcgtgacgatgaaattgagaaattggagcaacagatttcagaaattcagtcatta
tcttcagttttctcagaaaaaattatggatcaagagcgtgatattgatttgatcaacgac
ttggcattacacacatcggaaaatctgatagatggaaacgaatggattcgcaaagcgatc
acgaactctgctttccaacgagtttggttcttattctgcatcgttgtactcacttttact
cttcttttcctcgactggtacaatccataa
DBGET
integrated database retrieval system