Caenorhabditis remanei (nematode): GCK72_018012
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Entry
GCK72_018012 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq04517
IgSF CAM signaling
crq04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
GCK72_018012
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
GCK72_018012
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
crq04812
]
GCK72_018012
Cytoskeleton proteins [BR:
crq04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
GCK72_018012
Intermediate filaments
Intermediate filament-binding proteins
GCK72_018012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
Phage_tail_S
PH_11
Motif
Other DBs
NCBI-GeneID:
9818961
NCBI-ProteinID:
XP_053581262
UniProt:
A0A6A5G8P2
LinkDB
All DBs
Position
V:7773397..7781862
Genome browser
AA seq
2354 aa
AA seq
DB search
MSSVDDENHPAVEIDLPDEYESASDCEQAHECNYLGDILKAKKSLKKTRESVSPGVYPGS
AGALSSLSERHVDENKAPVSAEVFDSLCGRKTVNSVDLRFRGLRDEREFVQKKTFTKWVN
SHLVRVSCKVQDLYMDMRDGKMLLRLLAVLSGERLPKPTPGKMRIHCLENVEKGLQFLRN
QHVHLENLGSHDIVDGNSRLTLGLIWTIILRFQIQDITFEDADNHETRSAKEALLLWCQM
KTAGYPNVNVKNFSTSWRDGLAFNALIHKHRSDLVDYDNLQKSNALYNLQSAFDTAENQL
GLAKFLDAEDVNVDQPDEKSIITYVVTYYHYFNKLKQDNIQGKRIGKVINELMENDKMIN
RYETLSSDLLEWIHAKIQLLNDRHFENNLDGVQKQLTEFNDYRTQEKPPKFDEKGELEVL
LFTLQSAMRANNQRPFVPREGKLIADINRAWQSLEKAEHERELALKEELIRQEKLEQLAA
RFNRKAEMRETWLTENQRLVSQDNFGNDLSSVEAATKKHEAIETDIFAYEERVQAVVAVA
GELEAENYHDQAKINERKENVLKLWNYLFQLLLARRVRLELSMAIQKIFHDMLLTLDLMD
DIKSRLLSEDLGAHLMDVEDLLQKHALLESDINIIGERVNNSIAQSQRFRNEEGPDGSGY
KPVEPGTIDERCDTLQQRYKELLDLAAERKRRLEDNKRLCQFWWDVAELEHGIKEQEQVL
SSNDTGRDIVTVSHLLAKHKNAENNLRDLEKYLDRLDVSGKELQDENIPGSDNIPPRLAE
IRDYINKLKELSKARKERLAGGVEYYQFFTDADDVDRYLYDTLRVMSSEDVGKDEGTVQL
LLKKHDDVTDELQNFDQHIKVLHAKAESLPQEAREHPDIRQRLDTTLRQKAELENLAQLR
KQRLIDALSLYKLYSDADSVESWIDEKGKLLATLVPGRDIEEVEIMKHRFDTLEQDMKNQ
EAKVANVNDLARQLLNVEHPNSDDILHRQNKLNARWAQLRDMVDQKRNELERAHRLETFR
IDCQETVTWIEDKTRVLEDSDALTNDLSGVMKLQRRLSMMERDLGAIQAKLDSLHKEADD
IERERPQEAQAIREDIKRIHQVWDILNKKVREHEAKLDEAGDLQRFLRDLDHFQAWLTAT
QRQVASEEEPQSLAEAEQLLNQHAAIREEIDGYAEDYKKMRAMGDRVTQDQTDPQYMFLR
QRLAGLQEGWEELQRMWDNRQHLLSQGLNLQMFLRDAKQAEVMLSQQENYLAKDDVPQSL
EQAENQLKRHQDFITTMDANDEKIRAVGMFGDQLCQDGHYAADKIHKKARNIDERRGANR
EKAQDVLKKLKDALSLQQFLSDCDELREWIEEKMIRAQDETYRDAKTITSKFVRHQAFQS
ELAANKERLDQLKHAAINLGDDKPEYHGTIDPQIEELATQWDELEKTTEEKGQKLFDANR
QQLYVQSIADMKEWATQLENEMTREDQPGDLTTVNVAMQKQHLIETEMIKKAQHIDQLME
MEPQLEELHPEELENIRAHRLAVQEQLQRLQAPLDDRRKALERKKAAFQFGRDVDDEKLW
ISERLALARAQNLGESLPDCHRLQKNLNLLSSEIDNHEPWINQICNNGQELIDEGHANGP
AFEKKIQELRSAWQELKDAVQDRKKDLGESEKAHQFLYDCGEAEAWMSEQELYMMQDERG
KDEFSTKNQIKKHERLQADIDKFADTIRALANKAHKFVEENSPLTEQITVRQAQIEKLYA
GLQDLSKERRKRLEETLELYALHREIDDLLQWIADKEVVAGSQENGQDYEHVQMLQERFQ
QFARDTENIGSERVANANDGCDSLIAHGHTDAPTIALWKDSLNEAWENLLELMDTRAQIL
EASRLLHKFYHDCRDCLSRIMEKTHAMPEDLGRDSSSVGALSRKHQNYLKDIAAIGEQVA
QIERDAAELRDGYAGDKALDIGSRESEVVKAWRHLRGLCDARTSRLMDTSDLFKFMNMVR
DLLLWMDEVKREMNSQERPKDVSGVELLMNNHQSLKAEIDAREENFNACISLGRDLLNRK
HYASSEIEKKLIKLTTERAEMMRRWEDRWEYLQLILEVYQFARDAAVAESWLFAQEPYLI
SREYGRNLEETIKLIKKHEAFEKSALAQEERFLALEKLTTFELKESQHREEEASKRRGPA
HIGSPSRSTPAAETSFGAQDDEKRLAHSESSSWRKSLARAPKFDSKDPKGAKQGEAFEGT
LIRKHTYESLDRKAANRSWEKLYAVLRQNELAFYKDPKHREESVHGEPPMALPGCSVNVA
SDYQKKKNVLSLRLPVGAEYLLQCGSDEDMQRWLTELQVATGQAQLEEASRSQTLPAEGS
ATKKKGGFFSRSKK
NT seq
7065 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgttgatgacgagaaccatccggcggttgaaatagaccttccggatgaatat
gaaagtgcttctgactgtgagcaggcccacgaatgtaactatctcggggatattctcaaa
gctaaaaaatcactgaaaaagacaagagaatctgtgagtcctggtgtctatcctggctca
gctggtgctctttcttctctttcggaacgtcatgttgatgagaacaaagctccagttagt
gcagaggtttttgattctctctgtggtcgtaaaactgtaaattccgtcgatttgagattc
agaggattgcgagatgaacgtgaatttgtgcagaagaagacgttcacaaaatgggtcaac
tctcacttggttcgagtcagctgcaaagtacaagacctctacatggatatgcgagacgga
aaaatgctcctccgactccttgcagttctctctggtgaacgcctgccgaagccgacaccg
ggaaaaatgcgtattcactgtcttgaaaacgtggaaaaaggtctgcaattcctgcgcaac
cagcacgtgcatctcgaaaacttggggtcacacgatatcgttgatggaaactcacgcctc
accctgggtctcatctggacgatcatccttcgattccagattcaagacatcactttcgaa
gacgctgacaatcacgaaacacgttcagcaaaggaggctctgttgttgtggtgccagatg
aaaacagctggatatccaaatgttaatgttaaaaacttctcaactagttggagagatggt
cttgcattcaatgcacttattcataaacatagaagtgatctcgtcgattatgataatctc
cagaaatcgaatgctctttacaatttgcaatctgctttcgacaccgcagaaaaccaattg
ggtctggccaagttcctcgatgccgaagatgtgaacgttgatcagcctgatgagaaatca
atcatcacttatgtagttacttattaccattatttcaacaaactgaaacaagataacatc
caaggaaaacgtatcggaaaagtgatcaatgagttgatggagaatgacaaaatgatcaac
cgatacgagacactttcctccgatttgctcgagtggattcatgccaagatccaacttctg
aatgatcgtcattttgagaacaatttggatggagttcagaagcaactcacagagttcaac
gactaccgtactcaagagaaaccaccaaagttcgatgaaaaaggagaactcgaagtactt
ctgttcactcttcaatcagcgatgcgtgccaacaatcagagaccttttgtgccgagagaa
ggaaaactgattgctgatatcaatcgagcatggcaatcactcgaaaaagccgaacacgaa
cgtgagcttgctctgaaggaagaactcatccgccaggagaaactcgaacaactcgctgcc
cgattcaacagaaaggctgagatgcgtgagacttggctcactgagaatcaacgtctcgtc
agtcaagacaacttcggaaacgatttgtcgtccgtcgaagctgccaccaagaagcacgaa
gccatcgaaaccgacatcttcgcctacgaggaacgtgttcaagccgtcgtcgccgttgct
ggtgaacttgaagctgagaactaccacgatcaagccaagatcaacgagagaaaggagaat
gttctcaagctctggaactatcttttccaacttcttttggctcgcagagttcgtttggag
ctgtcgatggctattcaaaagatcttccacgacatgcttctcaccctcgaccttatggac
gatatcaagagcagacttttgagcgaagacctcggagcccatctcatggacgttgaagac
ttgcttcagaagcatgcactcctcgagtccgatatcaatatcatcggagagagagtcaac
aattccattgctcaatctcaacgattccgtaatgaagaaggaccagacggaagtggatac
aaaccagttgagccgggaaccattgatgagagatgtgacactcttcaacaacgttacaag
gagcttcttgatcttgctgctgaacgaaaacgtcgtctcgaagacaacaagagactctgc
cagttctggtgggatgttgctgagctcgagcatggaatcaaggaacaagaacaagttctc
tcctcgaacgataccggacgcgacattgtcaccgtctctcatttgttggccaagcataag
aacgctgagaacaatcttcgtgacttggagaagtatctcgaccgtctcgatgtctctgga
aaggaattgcaagatgagaatattccaggaagtgacaacattcctccaagactcgccgag
atccgtgattacatcaacaagctcaaggaactctcaaaagctcgcaaagaacgtcttgcc
ggtggagtcgaatactaccaattcttcactgatgctgatgatgttgaccgttacttgtac
gacactctccgcgttatgtcatctgaagacgtcggaaaggacgaaggaactgttcaactt
ctgctcaagaaacacgatgacgttaccgacgagttgcaaaacttcgaccaacacatcaag
gttcttcacgccaaggcggagtctcttccacaagaagcaagagagcatccagacatcaga
cagcgtttggatactactctccgacagaaggcagaactcgagaatcttgcccaactccgc
aagcaaagactcatcgatgctctttccctctacaagttgtactctgatgctgattcagtt
gaatcctggatcgatgagaagggaaaacttcttgctacattggtcccaggccgcgacatc
gaagaggttgagatcatgaagcacagattcgatactcttgagcaagacatgaagaaccaa
gaggcgaaggtcgccaacgtcaacgatttggctcgccaattattgaatgtggaacatcca
aactcggacgacatcttgcatcgacagaacaaactcaatgctcgttgggctcaacttcgc
gatatggtcgatcaaaagagaaacgaactcgagagagcacaccgtctcgaaactttccgt
atcgactgccaagaaactgtcacctggatcgaggacaagacccgtgttctcgaggattcg
gatgcgttgaccaacgatctctcaggagttatgaagctccagagaagattgtcgatgatg
gaacgcgatttgggagcaattcaagcaaaactcgattcgctccacaaagaagccgatgac
attgaaagagagagaccacaagaagctcaagccatcagagaagatatcaagagaatccat
caagtctgggatatcctcaacaagaaggttcgcgagcacgaggctaaactcgatgaagct
ggagatcttcaacgcttcctccgtgatttggatcacttccaagcttggctcactgctact
cagagacaagtcgcttcagaagaagaaccacaatcattggctgaagctgaacaacttctc
aaccaacacgctgctatccgtgaagaaattgatggatacgctgaggattacaagaagatg
cgtgctatgggagatcgtgttactcaagatcaaaccgacccacagtacatgttcctccgt
caacgtctcgctggacttcaagagggatgggaagagttgcaacgcatgtgggacaaccga
caacacttgctctcacaaggactcaaccttcaaatgttccttcgcgatgccaagcaagcc
gaggttatgctctcccaacaagaaaactatcttgccaaggacgacgttccacaatcattg
gagcaagccgagaaccaactcaagagacaccaagacttcatcaccaccatggatgccaac
gacgagaagatccgtgccgttggaatgttcggagatcaactctgccaagatggtcactac
gccgctgataaaatccacaagaaggctagaaacattgacgaacgtcgtggagctaaccgt
gagaaggctcaagacgtactcaagaagttgaaggatgctctatccctccaacaattcttg
tcggattgcgatgagttgagagaatggatcgaggagaagatgattcgtgctcaagacgag
acttacagagatgccaagaccattacttccaagttcgtcagacatcaagcattccaatcc
gagcttgctgctaacaaggaacgtctcgatcaactcaagcacgccgccatcaacctcgga
gacgataagccagagtaccacggaaccattgatccacaaattgaagagctcgctactcaa
tgggatgaattggagaagaccaccgaggagaagggacagaagttgttcgatgctaaccgt
caacaattgtacgttcaaagcattgctgacatgaaggagtgggccacccaattggagaat
gagatgactcgtgaagaccaaccaggagatctcaccactgtcaacgtggctatgcagaaa
caacatttgatcgagaccgagatgatcaagaaggctcaacacatcgatcaattgatggag
atggaaccacaactcgaagagcttcatccagaagagctcgaaaacatcagagctcaccgt
ttggctgttcaggaacaactccaacgtcttcaagctccattggacgatcgccgcaaggct
ttggagagaaagaaggctgcattccaattcggacgcgatgttgatgatgagaaattgtgg
atttctgagagacttgctcttgctagagctcaaaatcttggagaaagtcttccagattgc
caccgtctccagaagaacctcaaccttctttcgagcgaaatcgataaccacgagccatgg
atcaaccagatctgcaacaacggtcaagaactgatcgacgaaggacatgccaatggacca
gcattcgagaagaagattcaagaactgcgtagtgcttggcaagagttgaaggacgctgtc
caagacagaaagaaggatcttggagagagtgagaaggctcatcaattcttgtacgactgc
ggagaggctgaagcctggatgagtgaacaagaattgtacatgatgcaagacgaaagagga
aaagacgagttctcaaccaagaaccaaatcaagaaacacgaacgtcttcaagctgacatc
gacaagttcgctgacaccatccgtgctcttgccaacaaagctcacaagtttgttgaagag
aactcaccactcaccgaacaaatcactgtccgtcaagctcaaatcgagaaactctacgct
ggactccaagatctatcaaaggagcgcagaaaaagactcgaagagactttggaactctat
gctctccatcgcgaaatcgacgatcttcttcaatggatcgccgacaaggaagttgttgct
ggaagtcaagagaatggacaagactacgaacatgttcaaatgcttcaagaacgattccaa
caattcgctcgtgatactgagaacatcggatccgaacgtgttgccaatgctaacgacgga
tgcgactctcttattgctcacggacacactgacgctccaaccatcgctttgtggaaggat
tcgttgaatgaggcctgggagaatctacttgagttgatggacactcgtgctcagattctc
gaagcctctcgacttcttcacaagttctaccacgactgtcgtgattgcttgtctagaatc
atggagaagactcatgccatgccagaagatcttggacgtgactcaagtagtgtcggagct
ttatccagaaaacatcagaactatctcaaggatattgctgccatcggagaacaagtggct
caaatcgaaagagatgctgctgagctcagagatggatacgctggagacaaggctttggat
atcggttctcgcgaaagcgaagtcgtcaaagcatggagacatctccgtggactctgtgat
gctcgtacatcccgtcttatggatacttctgatctattcaagttcatgaatatggtccgt
gatctattgttgtggatggatgaggtgaagagagaaatgaactcacaagaacgaccaaag
gatgtgtctggtgttgaacttctcatgaacaatcatcaatcactcaaggctgaaattgat
gctcgtgaagagaacttcaatgcttgcatctcgttgggaagagatttgctcaacagaaaa
cattatgcttcgagcgaaatcgagaagaaattgatcaaactgacaaccgaaagagccgaa
atgatgcgcagatgggaagatcgttgggaatatttgcagctcatcttggaagtgtaccaa
ttcgcccgcgacgctgctgtcgccgaatcttggctcttcgcccaagagccatatctcatt
tcgagggaatacggtagaaacctcgaagaaaccatcaaactcatcaagaagcacgaggcg
ttcgagaaatcggcactcgcacaggaagaacgattcttggcactcgagaaattgacaacg
ttcgagttgaaagagagtcaacaccgcgaggaagaggcttcaaagcgacgaggaccagcc
cacattggcagtccttccaggtcgacaccagccgccgaaacatctttcggcgcccaggat
gatgagaaacgattggcacactccgagtcaagcagctggcggaaatcattggcgcgcgcg
ccaaagttcgacagcaaagatccaaagggagccaaacaaggagaagcattcgaaggaacg
cttatcaggaaacacacatacgaaagtctcgaccggaaagcggctaaccgctcatgggag
aaactttacgctgtgttgcgacagaatgaattggcattctataaagatccaaagcatagg
gaagaatccgtacatggagagcccccaatggcacttccaggatgttcagtcaacgtggca
tctgactaccaaaagaagaagaatgttctatcgttgaggttaccagtcggagctgaatat
ctcttgcaatgtggcagtgacgaagacatgcagagatggctcacagagctacaagttgcc
actggacaagctcaattggaagaagctagtcgatcacaaacacttccagcagaaggcagc
gccaccaagaagaagggaggattcttctcccgaagcaagaagtaa
DBGET
integrated database retrieval system