Caenorhabditis remanei (nematode): GCK72_018094
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Entry
GCK72_018094 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K14315
nucleoporin NDC1
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GCK72_018094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crq03019
]
GCK72_018094
Messenger RNA biogenesis [BR:
crq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
GCK72_018094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
9812415
NCBI-ProteinID:
XP_003114391
UniProt:
E3LPQ2
A0A6A5G963
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Position
V:complement(<8090706..>8092889)
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AA seq
590 aa
AA seq
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MMGDTASSFTSLADNQLYNKFSPSRRKVEYPAANISSSSPSLRKSPGRAFSTSYPHLNRP
ITIFDQIVTWFHSEIDKRKRFASVVCGYFVALTFIATVSILKLSIWSPFSSVHDSLTWWI
YPSSWPSIVFIWVSSVALAYALILQFCKVTQLQRIPLTDTFAWAGVAHEFIHRLVFVYMA
FSVAESSLFEDFAWIAISFAVAVSSTLVIFRSDFHLNFSNVQVNSVKTLLQFVKSLPYGS
VSETCGVDAAIAYTASMALVLIAGPLLWGFSVWWLLVDIPFQMVLFGVCFTQQFYSKFFM
KIVNQIVMKPMKFSFPPPYTVHTPTQDQIRSLPNVIETDDQLLRMFAFHDLRTVAWEDEQ
RRVDVFSLSQPGKHPRNWKAVSLPCIRTLDELCSRMTVAAARLVGYSWDDHDAESEEVPR
EAVMMPRKMREMAYHGAGPSRQQQNIAPIRTHNTQTAGFFDRIIRNLGFGKTERLVISRF
DAQMNAYAAEAVYMLVVDSMGEDRFGVVQKDLKELITLLCKLISAIDTYERAKASVADKS
DVTFLRIVDASLKSSLQRVVTTFGSHLRSLELADEHIRTIRLVCLNEEFE
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgatgggggatactgcatcttcatttacatcactggcagacaatcaactgtataacaaa
ttttcccctagtagaagaaaagttgagtatcctgctgcgaacatttcatcttcctcgcca
agcttgcggaaatcaccgggccgggcattcagcacatcttatccccatcttaaccgaccg
atcacaatattcgatcagattgtgacttggtttcactctgaaatcgataagcgaaagcga
tttgctagcgtcgtgtgtggatatttcgtagccctaacatttatcgccacagtttctatc
ttgaagctgtcgatatggtcaccgttcagttcggtgcacgattccctaacatggtggatc
tatcctagctcgtggccttcgatcgttttcatttgggtatcctcagtcgcattagcttat
gctctcattcttcagttctgcaaagttactcaactacaacgaattcctctcacggataca
ttcgcatgggctggagtcgctcacgaatttattcatcgtttggttttcgtatacatggct
ttctccgtagctgagtcgtcgttgtttgaagattttgcgtggattgccatttcattcgcc
gtcgccgtgtcatctactcttgttattttcagatctgattttcatttgaatttttctaat
gttcaagtgaactctgtcaaaactcttctccaattcgtgaaatctcttccgtacggatcg
gtctccgagacatgtggagtcgatgcagccatcgcctacactgcttccatggctcttgtg
ttgattgctggtcctcttctgtggggattctctgtttggtggcttctcgttgatatcccc
tttcagatggttttattcggagtttgtttcactcaacaattttactcgaagtttttcatg
aagatagttaaccaaatagtcatgaagccgatgaaattctcattccctccaccatacacc
gtccacactccaactcaggatcaaattagatcccttccaaatgttattgaaactgacgat
caacttctgagaatgttcgcttttcatgatctccgtacagtagcatgggaagacgaacaa
cgtcgggtcgatgtgttttctctctcacaacctggaaaacatccacgtaattggaaggct
gtttctttgccatgcatccgcacacttgatgaactttgttcgagaatgacagtagctgct
gcacgtcttgttggatactcgtgggatgatcatgatgctgagagcgaggaagtgccacga
gaagctgtaatgatgcctagaaaaatgcgtgagatggcataccatggagccggaccaagc
cgacagcagcagaacattgcaccaattcgtactcacaacactcagacagcaggatttttc
gacagaatcatccgtaatcttggattcggaaaaacagagagacttgttatttctcgtttc
gatgctcaaatgaatgcatatgctgctgaagctgtttacatgctggtggttgattcaatg
ggagaagatcgatttggagtggttcagaaagatttgaaggaacttatcactcttttatgc
aagcttatttctgccatcgacacatacgaaagagcgaaagcttcggtcgctgacaaatca
gatgtgacatttttgcgtatcgttgatgcatcgctcaagtctagtcttcaacgcgtcgtc
actacattcggaagtcatttgagatcgcttgaactggctgacgaacacattcgtacaatt
cgacttgtctgccttaatgaagaattcgaatga
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