KEGG   Caenorhabditis remanei (nematode): GCK72_018269
Entry
GCK72_018269      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K03504  DNA polymerase delta subunit 3
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq03030  DNA replication
crq03410  Base excision repair
crq03420  Nucleotide excision repair
crq03430  Mismatch repair
crq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:crq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GCK72_018269
   03410 Base excision repair
    GCK72_018269
   03420 Nucleotide excision repair
    GCK72_018269
   03430 Mismatch repair
    GCK72_018269
   03440 Homologous recombination
    GCK72_018269
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:crq01009]
    GCK72_018269
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:crq03032]
    GCK72_018269
   03400 DNA repair and recombination proteins [BR:crq03400]
    GCK72_018269
Protein phosphatases and associated proteins [BR:crq01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     GCK72_018269
DNA replication proteins [BR:crq03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    GCK72_018269
DNA repair and recombination proteins [BR:crq03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      GCK72_018269
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     GCK72_018269
SSDB
Motif
Pfam: CDC27 SPC25
Other DBs
NCBI-GeneID: 9812398
NCBI-ProteinID: XP_003114159
UniProt: E3LQ68 A0A6A5GAQ3
LinkDB
Position
V:complement(8672423..8673679)
AA seq 385 aa
MVEKYTTLLDDVCDPLTVRKFTEMSSLSRKEAISVLEKYIEAKGDPVWALYEITGIVDSS
EYSFLPAGEKMIKHVVVPGSALEETKKTFSEVISTCLHSVQRTNPNNTRVYGRSWANNDD
LKGKTLPSQEIRLRKSVSPAKDLKKEKSAEPEQKLSSSSASKPVAEAKKSTIVPLKKQAN
ISSMFAKKPEKKTEKAEKSVSPPPKEEEKKTRKRPKIEVDEPEEPEEELEIVNKKDKTPV
KKVHDSDEFPSSREQSVEKEKSPPAKRQKKGVNDENKKAKKRLIVPDSDDEEVQERMDVE
EKKVKIDEKPKKPEDRRRTTRIEKVVETFVDEDGYLVSKEIQKTVECSPQKSPEKVKAKV
ISAPVPGAAKVPKKNSTITSFFKKA
NT seq 1158 nt   +upstreamnt  +downstreamnt
atggtggaaaaatacaccacactactcgatgatgtttgcgatccactcacagtgcggaaa
tttaccgaaatgtcttcattatccagaaaggaagcaataagtgttctagaaaagtacata
gaggcaaaaggagatccagtgtgggctctctatgaaataactggaattgttgattcatcg
gagtattctttccttccagcaggagaaaaaatgataaagcacgtcgttgttcccggatcc
gctttagaagagacgaagaaaacattctctgaagttatttccacatgcctacatagtgtg
caacgtactaaccctaacaatacccgcgtctatggccgttcatgggctaataatgatgat
ctgaaagggaaaacgttgccatctcaggaaattcggctgagaaagtctgtttctcctgca
aaagacttgaaaaaagaaaaaagtgcagagcccgagcagaaacttagcagctcttctgct
tccaaaccagttgccgaagcaaagaaaagtactattgtcccactgaaaaaacaagcaaat
atcagtagcatgtttgccaaaaagcctgagaagaaaactgaaaaagctgaaaaatcagta
tctcctccacccaaagaagaagaaaagaaaactcgaaagcgcccgaagatagaagttgat
gaaccagaagaaccagaggaagagcttgagattgtgaataaaaaagataagactcctgta
aagaaggtgcatgacagtgatgaattcccgtcatcaagagagcaaagtgtcgagaaagag
aaatcaccacccgctaaacgccagaagaagggggtgaacgatgagaataagaaggcgaaa
aaacgattgattgtaccagattcagatgatgaggaggttcaagaacgaatggatgtcgaa
gaaaagaaggtgaagatagacgagaagccgaagaaaccagaagatagacgtaggacgaca
cgaattgaaaaagtcgtggagacttttgttgatgaagatggttatttggtgtcgaaggaa
atccaaaaaactgtcgaatgttcaccacaaaaatcgccggaaaaagtcaaagcgaaagtt
atcagtgctcccgtacctggtgccgccaaagttccgaagaagaactctacgattacttcg
tttttcaaaaaagcctga

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