Caenorhabditis remanei (nematode): GCK72_018400
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Entry
GCK72_018400 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K06671
cohesin complex subunit SA-1/2
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
crq03036
]
GCK72_018400
Chromosome and associated proteins [BR:
crq03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
GCK72_018400
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Paralog
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
GDH_C
AAR2
Motif
Other DBs
NCBI-GeneID:
9812214
NCBI-ProteinID:
XP_053581447
UniProt:
A0A6A5GAM0
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Position
V:<9108674..>9112216
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AA seq
1096 aa
AA seq
DB search
MSEPPTDHSPQRMSTRNQARVNYTEMASGNAPAEKEPVFRSPTASTRGRKKRPANVDVSD
LSASFGNLNSFNTPPKRGRPRGAAFGSARGGRAPMVRRTTTEEPVEVEERELVAAVKTGR
KIPEAVDRWIGRYNEKFLVAIAEMHQFFFAICGCKGTVTPQMSATLSYKDIICRMTEDFE
EDSADYPLVHGGSSKKFRANLHTFIHSLISRIKASMLFDSNLMDGFVQLLTGMADSQVRS
FRHTATYCAMKITSALVDVTIELTNTKDKTSKQIEAEKAKLKNNSAGNEKYEALVAQRTQ
TEERAEEIRQIIGYLFRSVFVHRYRDCVPDIRCICIQELGYWMDVYPEHFVDDSYLKYIG
WSLFDKVGDVRHRCISALIPLFEKSSILDKLELFVNKFKERLGSMLLDKDMETSIETVNL
MRVLYTVFPTLLTIKDTVPLYELIYATNRPLAIAAGMFLNTKVFLAAEKPGKTPISKNSA
LLKDLATFFIEGDLHQHGTYLVDALIDTNPLIKDWATMADMLLHDQPPLKPEYEAKIIEI
LSCSVTQSSTGEPPVGRQSVKKGAPSAKEARDLKEDRARLTEILIPLVPRLLTRFSTDSE
KIVNLVNIPLHFQLDMYLSPRMQTHLTELMDALDALIEKHIDEDVLRAVAELYYHLTNYS
PLTAIVDTHKSKLLDGIAAFIRKSMQQFEDDQMGEEEEALFVSYIKRMAAFAGFMDLRQW
DLWDILVKIVSNYSREDSSRDVRERSTQMMFVQLVFDLSTLKREGEIPKADHVRKLKKRR
DQLVRILSQTLIEEAVGVEQAYLCICDLMILFGSQLAEDSKAFEPLIWRPDDILLGNIKI
FLNVNVFEQPEQQDDEANQEKQIEMMHKMRQFVAQYAKLIIHGAMPIIDAAELIKRYQSH
FQHFGDIFKSLLTKCRDIDFVDMGVMIVEALKGLFMEMDRSQREEPLCDRFNAMRDLAKR
LGPLFGSDYAKNRFAVTSLHKKAIDFAFESFDKKDSMPSNIYFLEIAIEFSGKLLAQDKG
AVSRYLNKVYTNRVGTIENVWEPYRLYNLSLTSGADDDNMSVRSGVTVASVSTVRSAASS
TRGRGRGRRARIVDDF
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaccaccaacagatcattcgcctcagcgcatgtctacgcgaaatcaggctcgt
gtgaactacacggaaatggcatctggaaatgctccagctgagaaagaacccgtgttccgt
tcaccgactgccagtactcgcggtcggaagaagcgccctgccaatgttgatgtatcagat
ctatccgccagtttcggaaatctcaacagctttaacactcccccgaagcgcggacgtccc
cgtggagcagcttttggaagtgcccgtggtggtagagcaccaatggttcgacgaacaact
acagaagagccggtagaagttgaagaacgggaactggttgccgctgtaaagactggaagg
aagattccagaagctgttgatagatggataggtcgatataatgaaaaattccttgtcgct
atcgccgagatgcatcagtttttctttgcgatctgtggatgcaaaggcactgtcacacca
caaatgtccgccacactatcatacaaagacataatttgccgtatgacagaagatttcgaa
gaagattctgcagactacccactcgttcacggaggaagttcgaaaaaattccgtgctaac
ttgcacacattcattcattcactcatcagcagaataaaagcttccatgctattcgatagt
aatttgatggatggatttgttcaacttctcaccggaatggccgacagtcaagtccgttcg
tttcgacacacggcaacttattgcgctatgaaaataacatcagccctcgtagatgtaact
attgaattgacaaataccaaagacaagacttcaaagcaaatcgaagcagaaaaagcaaag
ttgaagaataattcagctggaaacgagaaatatgaggccctagtggcacaaagaacgcaa
acagaagaacgagctgaagaaatccgtcaaatcatcggatatttgttccgaagtgttttc
gtccatcgttatcgtgattgtgtcccggatattcgatgtatctgtattcaagaactcggc
tattggatggatgtttatccagagcacttcgtcgatgactcatacctcaaatacatcgga
tggtcgttattcgacaaagttggagatgtaagacatcgctgtatcagtgcattgatccca
ctattcgagaaatcgtcgattctagataaactcgaattgtttgtcaataaattcaaggaa
cgtcttggttcaatgttactcgacaaagacatggaaactagtatagagactgttaatctt
atgcgggttctttacactgtcttccctacacttcttaccatcaaggacactgtgccactg
tacgagttgatttacgcaacaaaccgtccattggctattgctgctggaatgttcctgaac
acgaaagtctttctcgctgctgaaaagccgggaaaaactccaatttccaagaatagtgca
ctactcaaggatcttgccacattttttattgaaggcgatcttcatcaacatggaacatat
ttagtggacgcattgatcgacacgaaccctttaatcaaggattgggcaaccatggcagac
atgttgctccatgatcaacctcccctaaagccggagtatgaagctaaaatcattgaaatt
ctctcgtgctctgttacgcagtcttcaacaggagaaccccccgttggccgacagagtgtt
aaaaaaggagctccatctgccaaggaggctcgtgatctaaaggaagatagagctcgtcta
acagaaattctcattccgctagttccacggttactcacgaggtttagtacggacagcgag
aaaatcgtcaatttggtcaacattccattgcatttccaattggatatgtatctatcacct
cgaatgcaaacgcatctcacagagcttatggatgccctggatgctttgatcgagaagcat
attgatgaagatgtgttgagggcagtcgctgaattatactatcatttgacgaattattca
ccgcttactgctatcgtggatactcataaatcgaagcttcttgacggaatcgcggctttc
atccgtaaatcaatgcaacaatttgaggatgatcaaatgggtgaagaagaagaagcactt
ttcgtctcttacataaaaagaatggctgcttttgctggattcatggatcttcgtcaatgg
gatctttgggatattctcgtgaaaatcgtgtccaactactctcgtgaggattcttcacga
gacgtacgggagagatcgacgcagatgatgttcgtacaacttgtgttcgatttgtcaact
ctcaaaagggaaggagaaataccgaaagctgatcatgttcgtaaattgaagaaaagaaga
gatcaactggttcgaattctttcccaaactttgattgaagaggctgttggcgttgaacaa
gcctacctctgtatctgcgatttgatgattctcttcggaagccaattagccgaggattct
aaagcgtttgagccactaatctggaggccagatgatatacttctcggaaacatcaagatt
ttcttgaatgttaatgttttcgaacaacccgagcagcaggatgatgaggcaaatcaagag
aaacaaatcgagatgatgcacaaaatgcgacaatttgtcgctcaatatgctaaattgatt
attcatggagcaatgccgatcatcgatgctgcagaactcatcaagagatatcaatctcac
ttccaacattttggagacattttcaagagtctattgaccaagtgccgagatattgatttt
gttgatatgggtgttatgattgttgaagctctcaaaggtctttttatggaaatggacaga
tcacagcgagaagagcctttgtgtgatagattcaatgcgatgcgcgatctcgcaaaacga
ttgggacctcttttcggatctgattatgccaaaaaccggttcgctgtgacttctttgcac
aaaaaagctattgatttcgcatttgaaagtttcgataaaaaagattcaatgccgtcaaac
atatattttctggaaatcgctattgagttcagcggaaaacttttggctcaagataagggg
gcagtaagtcgatacctcaataaagtttacacgaatcgcgttggcacaatcgaaaacgtt
tgggagccataccgtttatataatctatcacttacctctggagctgatgacgacaatatg
tcagtacgaagtggtgttactgtcgcttcagtttctaccgtgcgcagtgcagcttcatcg
acgcgaggaagagggcgcggtcgtcgtgccagaatagtagatgatttctaa
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