Caenorhabditis remanei (nematode): GCK72_018655
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Entry
GCK72_018655 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
GCK72_018655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crq04121
]
GCK72_018655
03036 Chromosome and associated proteins [BR:
crq03036
]
GCK72_018655
Ubiquitin system [BR:
crq04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
GCK72_018655
Chromosome and associated proteins [BR:
crq03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
GCK72_018655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR5
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
MIOS_WD40
Beta-prop_CAF1B_HIR1
Motif
Other DBs
NCBI-GeneID:
9825463
NCBI-ProteinID:
XP_003110291
UniProt:
E3M0E9
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Position
V:complement(9974634..9976595)
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AA seq
381 aa
AA seq
DB search
MSTNGHVVNGDAQVPPVLAPPPLGGLGRGNDIVIGARDRRCEIYRFNSEQPLYASAWSNK
NDIKFRLAVGTITDVGANPRAANKVSIVQLKDDTGELVETTSFPMEFPANAVGFIPDLEN
AYPDLLATTSDCLRLWRIVDGKAQADTVMHNLTNAQYGSALTSFDWNEVEPRYIGVASVD
TTCTIYDIEVGAAIGATRPTAPFTVKTQLIAHDRPVHDIEFSKINGGRDHFATVGADGSA
RMFDLRHLNHSTIVYEDPGKEKLQRLSWNKQEHYFLALFAENSQEVQILDIRMPCSILCR
LRNHNGPVNGIAWAPHSPHHICTAGDDSQALIWDLQHAPRPVEDPILAYSAGGEVNQIHW
GPVHSNWIAICFNKTLEILRV
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaaacggtcatgttgtcaatggagatgctcaagttcctccagtacttgcacca
cctccattgggtggtcttggacgtggaaatgatatcgtaattggagcgagagatagaaga
tgtgaaatctatcgcttcaattcggagcaaccactttatgcgtctgcatggagtaacaaa
aacgatatcaaattccgtctggcagtcggaacaatcactgatgtcggtgccaatccaaga
gctgcaaacaaagtttccattgtccaactgaaagatgacactggagagcttgttgaaact
accagcttcccaatggaattcccagcaaacgcggttggatttattcctgatctcgaaaac
gcctatccagatcttctggcaaccacttcggattgccttcgtctctggagaatcgttgat
ggaaaagctcaagcagataccgttatgcacaacttgactaatgctcaatatggatctgca
ctaacaagttttgattggaacgaagtggaaccaagatacattggagttgcaagtgttgat
acaacttgcaccatttatgatatcgaggttggggccgctatcggagctactagaccaact
gccccattcactgtaaagactcaattgattgcccatgacagaccagttcacgacatagaa
ttctcaaaaatcaacggaggaagggatcactttgcaaccgtcggagccgatggaagtgcc
cgaatgttcgatcttcgtcatctgaatcactcaacgattgtctatgaagatccaggaaaa
gagaaacttcaacgactctcttggaacaaacaagagcactattttctggctctgttcgct
gaaaacagtcaagaagtccagattctggatattcgtatgccatgcagcatcctctgtcgt
ctccgtaatcataatggaccggtcaacggtatcgcgtgggctccgcatagcccacatcac
atttgcactgccggagacgattcgcaagctttgatttgggatcttcagcacgcgccgaga
ccagtggaagatccgattttggcttattccgctggaggagaggtcaatcaaatccactgg
ggaccagttcacagcaattggatcgcaatttgcttcaacaagactctcgaaattctccgc
gtttaa
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