KEGG   Caenorhabditis remanei (nematode): GCK72_018655
Entry
GCK72_018655      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K11805  DDB1- and CUL4-associated factor 7
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:crq00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    GCK72_018655
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:crq04121]
    GCK72_018655
   03036 Chromosome and associated proteins [BR:crq03036]
    GCK72_018655
Ubiquitin system [BR:crq04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     GCK72_018655
Chromosome and associated proteins [BR:crq03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.3/1.5)
     GCK72_018655
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR5 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_WDR3_1st WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin MIOS_WD40 Beta-prop_CAF1B_HIR1
Other DBs
NCBI-GeneID: 9825463
NCBI-ProteinID: XP_003110291
UniProt: E3M0E9
LinkDB
Position
V:complement(9974634..9976595)
AA seq 381 aa
MSTNGHVVNGDAQVPPVLAPPPLGGLGRGNDIVIGARDRRCEIYRFNSEQPLYASAWSNK
NDIKFRLAVGTITDVGANPRAANKVSIVQLKDDTGELVETTSFPMEFPANAVGFIPDLEN
AYPDLLATTSDCLRLWRIVDGKAQADTVMHNLTNAQYGSALTSFDWNEVEPRYIGVASVD
TTCTIYDIEVGAAIGATRPTAPFTVKTQLIAHDRPVHDIEFSKINGGRDHFATVGADGSA
RMFDLRHLNHSTIVYEDPGKEKLQRLSWNKQEHYFLALFAENSQEVQILDIRMPCSILCR
LRNHNGPVNGIAWAPHSPHHICTAGDDSQALIWDLQHAPRPVEDPILAYSAGGEVNQIHW
GPVHSNWIAICFNKTLEILRV
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgtcaacaaacggtcatgttgtcaatggagatgctcaagttcctccagtacttgcacca
cctccattgggtggtcttggacgtggaaatgatatcgtaattggagcgagagatagaaga
tgtgaaatctatcgcttcaattcggagcaaccactttatgcgtctgcatggagtaacaaa
aacgatatcaaattccgtctggcagtcggaacaatcactgatgtcggtgccaatccaaga
gctgcaaacaaagtttccattgtccaactgaaagatgacactggagagcttgttgaaact
accagcttcccaatggaattcccagcaaacgcggttggatttattcctgatctcgaaaac
gcctatccagatcttctggcaaccacttcggattgccttcgtctctggagaatcgttgat
ggaaaagctcaagcagataccgttatgcacaacttgactaatgctcaatatggatctgca
ctaacaagttttgattggaacgaagtggaaccaagatacattggagttgcaagtgttgat
acaacttgcaccatttatgatatcgaggttggggccgctatcggagctactagaccaact
gccccattcactgtaaagactcaattgattgcccatgacagaccagttcacgacatagaa
ttctcaaaaatcaacggaggaagggatcactttgcaaccgtcggagccgatggaagtgcc
cgaatgttcgatcttcgtcatctgaatcactcaacgattgtctatgaagatccaggaaaa
gagaaacttcaacgactctcttggaacaaacaagagcactattttctggctctgttcgct
gaaaacagtcaagaagtccagattctggatattcgtatgccatgcagcatcctctgtcgt
ctccgtaatcataatggaccggtcaacggtatcgcgtgggctccgcatagcccacatcac
atttgcactgccggagacgattcgcaagctttgatttgggatcttcagcacgcgccgaga
ccagtggaagatccgattttggcttattccgctggaggagaggtcaatcaaatccactgg
ggaccagttcacagcaattggatcgcaatttgcttcaacaagactctcgaaattctccgc
gtttaa

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