KEGG   Caenorhabditis remanei (nematode): GCK72_019095
Entry
GCK72_019095      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K03124  transcription initiation factor TFIIB
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:crq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    GCK72_019095
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:crq03021]
    GCK72_019095
Transcription machinery [BR:crq03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     GCK72_019095
 Prokaryotic type
  Archaeal type
    TFB
     GCK72_019095
SSDB
Motif
Pfam: TFIIB Cyclin_C BRF2-like_C_cyclin_rpt Brucella_OMP2 Sigma70_r4
Other DBs
NCBI-GeneID: 78776746
NCBI-ProteinID: XP_053581789
UniProt: A0A6A5GBS4
LinkDB
Position
V:complement(11526080..11527942)
AA seq 176 aa
MFKEVLDSGVLRGKNIEAQAAACLYIACRQDGVPRTFKEICAISRVSKKEIGRCFKIIVR
NSSTNLEHVTSADFMSRFCGNLYLPNSIQAAATRIAKRAVDMDLVAGRSPISIAAAAIYM
ASQASAEKRTAKEIGDIAGAAEVTIRQTYKLLYPKAAELFPEDFKFETAIEGLPSS
NT seq 531 nt   +upstreamnt  +downstreamnt
atgttcaaagaagttctcgatagtggtgttcttcgtggaaagaatatcgaagcacaagca
gctgcctgtctgtatattgcttgtcgacaagacggagttccacgtacattcaaagaaatt
tgtgccatatctcgtgtctcgaaaaaagaaattggaaggtgcttcaaaattatagttcgg
aactcgagcacaaatcttgaacatgtcacatctgccgattttatgtcgagattctgtgga
aacttgtatttgccgaactcgattcaagcagctgctacgaggattgcaaagagagccgtt
gatatggatttagtcgcgggtcgctctccaatatcaatcgcagccgccgcaatctacatg
gcttctcaagcatctgctgagaaaagaactgccaaagaaatcggtgacattgccggagct
gctgaagtgaccattcgccaaacatacaaattattgtatccaaaggctgctgaactcttt
ccagaagatttcaaatttgaaactgcaatcgaaggacttccaagttcctaa

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