Caenorhabditis remanei (nematode): GCK72_019109
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Entry
GCK72_019109 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K26500
BOS complex subunit NOMO
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crq04131
]
GCK72_019109
Membrane trafficking [BR:
crq04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Multi-pass translocon (MPT) complex
GCK72_019109
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOMO1-like_1st
CarboxypepD_reg
NOMO1-like_9th
NOMO_5th
SpaA
EMC7_beta-sandw
CarbopepD_reg_2
Ig_NOMO
SdrD_B
bMG3
NOMO_3rd
DUF2846
TcaA_3rd_4th
Motif
Other DBs
NCBI-GeneID:
9838850
NCBI-ProteinID:
XP_053581793
UniProt:
A0A6A5GCV7
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All DBs
Position
V:complement(11587510..11591397)
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AA seq
1119 aa
AA seq
DB search
MGYLPLIVLSFLLPGALANVYSCAGFVKSTSQIDYSELKVKLLTLEGHLKHEEEVNPSNG
YFMIPVYNKGQYTLKVSSPSGYYFEPDTIEIKIDGKTDACSKNEDLIFKLTGFSVRGTVD
GAPAGLSLVLTENGKQVASTKTSEGGKYEMSAPPGKYEVSTGSDSSECISRGKTAVEVKN
SPVVVTPNLKISGYQLEIATKTQAFHPFTDAVITLYAASSIDLPNVKCETSKGAPNVPST
HNVKCSVGKTDPRGRLSVACIPSGIYYLMASYENGPTSITFDENPQKIEVSQSALQTGFI
ATSASGRVRVLAKDQPLSDVEVLVNGQKSGKTDSQGYITLKNLKEGEQTTVTANAPNTQF
NAVQVKIQFPKVEIEEVRVQKFEICGQVEKTEEGTLEKLTFTRKDDKRSLEIQPKPDGSF
CQSVSPGQFTVEPTDKTSSLTPRLLEVDVLTKPVTNLRFTHFKTNANVHVSCIGACPTST
ISLYLPGQTLVRSVKGTDVFVFENIGPGTYSARLDDNGRGCWEQSEMTLNIVQSKTQPAI
HFKQSGFAAQIEISHPAEIEWSSVDKKQLNGKTETKGGEVISICVPTSGLYDISLNSCYK
FDKQQFKLTVPFDGVHKEKAIAARITGQIDLENDKNGAVSLRVKSSAGDREIQVSTSENG
RFTFDEPLASSGEQLILVPSSKVRLFEPTSKSITVTGKCINNAVVFKSFRGIFLDGSIKP
AVENAAVKAVLKSDKDVVIETASGKDGKFKIGPVKRVEDYEITATLDGFKFTPTSTPGHF
ESVKLSQLSIKVVDEVTNEPLDGVLLSLVGGRGSDYRSNNVLDTTAHKNFVALAPGEYFV
RAILQEYKFSPSTSTISVKEGQHENVVLKGKRVSFSAFGKIREMSGNSVADVIVEALSQG
CDLHQSEATTNPDGTFRIRGLLPDCEYQVYAKSFTDGSHAPHTFPRQFTVSMTPEDVKGL
EFIATKTVKTTDIAVEIGMDTLPEILSVRVVITRNDNEHVKTSSVVAPQHLHYLVNLPRD
GVEYAIRVEPEKPPNAFAAKTVRVVADQAMKVARVPLTTSKRLNDVDISVGTLLSLPFFV
SLALIFFNQNRVLEYLEVFLDWARNTFSPAADNQYKRRK
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgggttatttaccattaatcgtgttatcatttctgctcccaggagcccttgccaacgtc
tacagttgtgctggattcgtgaaatcaacctcacaaatagattactctgaattgaaggta
aaacttctgacgttggaaggacatttaaagcatgaggaagaagtgaatccatcgaatgga
tatttcatgattccggtttacaacaagggacagtacactctgaaagtttcctctccatct
ggatactattttgaacctgatactatcgaaatcaaaatcgatggcaaaaccgatgcatgt
tcaaagaacgaagacctcattttcaaactcactggattctcagttcgtggaacagttgat
ggagcacccgctggtctttctctcgttttgactgaaaatgggaaacaagtcgcttctaca
aagacttctgaaggtggaaagtacgaaatgagcgctccgccaggcaaatatgaagtatct
actggttctgattcatctgagtgcatttctagaggaaaaactgcagtagaagttaagaat
tcgccagttgtggtcactccaaatctcaaaatttctggttatcaactagaaatcgccaca
aaaacacaggctttccatccattcactgatgcagttattacactttatgcggcatcttcc
attgatctaccaaatgtcaaatgtgagaccagcaaaggagcaccaaatgtaccaagcact
cataatgtcaaatgctccgtcggaaaaactgatccacgtggacgactgtctgttgcttgt
attccatctggaatctattatttgatggcttcttatgaaaatggtccaacttccatcaca
ttcgatgaaaatcctcaaaaaattgaagtttcgcagtcagctctccagactggattcatc
gcaacatcagcatctggacgtgttcgtgtacttgcaaaagatcaaccattatctgatgtt
gaagttcttgtcaatggacagaagagcggaaaaactgattcccaaggatacattactctc
aaaaatctgaaggaaggtgaacagacaactgtaactgcaaatgctccaaacacccaattc
aacgcagtccaagtgaaaattcaattcccaaaagttgaaatcgaggaagttcgtgttcag
aagtttgagatctgtggacaagtagagaaaactgaagaaggaacactggagaagttgaca
ttcaccagaaaagacgataaacgatcattggaaattcaaccaaaaccggatggaagcttc
tgtcaatcagtcagtccaggtcaattcacagtcgaaccaactgataagacatcttctctg
actccacgtcttttggaagttgatgttttgacaaaaccagttacgaacttgcgattcaca
cacttcaaaacaaatgccaacgttcatgtctcatgtattggagcctgccctacatctact
atttctctctatctgccaggacaaactctcgtaagaagtgtgaaaggaaccgatgtcttc
gtgtttgagaatattggaccaggaacatatagtgctagattggatgacaatggaagagga
tgttgggaacaatctgagatgactttgaatattgttcaaagcaagacacaacctgcaatt
catttcaagcagagtggatttgcagctcaaatcgaaatttcgcatccagctgaaattgaa
tggtccagtgttgacaagaaacaactcaacggaaaaaccgaaacaaagggaggagaagtt
atttcaatctgtgttccaacttctggtctatacgatatttccctcaattcgtgttacaag
ttcgacaagcaacagttcaagttgactgttccttttgacggagttcacaaagaaaaagct
atcgcagcacgaattactggacaaattgatctggaaaatgacaagaatggagcagtttct
cttcgtgtgaaatcaagtgccggagaccgagaaattcaagtttcgacatctgaaaatggt
cgattcacattcgatgaaccattggcaagttctggagaacagttgattcttgttccatcg
tcaaaggtccgtctcttcgaaccaacttcaaaaagcattaccgtcactggaaagtgtatt
aacaatgctgtggttttcaaatcattccgtggaattttcttggacggatccatcaaacca
gctgttgagaacgctgctgtgaaggctgtgttgaaatcggataaggatgtggttatcgaa
actgcttctggcaaagatggaaaattcaaaatcggcccagttaaacgtgtcgaggactat
gagatcactgcaactcttgatggtttcaaattcactccaacttcaactccaggacatttc
gaatcggtcaaactctctcaactatcaatcaaggttgtggacgaggttactaatgaacca
ttagatggtgttcttctttcgttagttggtggaagaggatcggattatcgatcaaacaat
gttctcgatacaacagctcataagaatttcgtcgctttggcaccaggagaatacttcgtc
agagccattcttcaagaatacaaattctccccatccacctcgacaatttcagtgaaagaa
ggacagcacgagaacgttgttttgaagggaaaaagagtatctttcagtgcatttggaaaa
ataagagaaatgtctggaaattctgtagcagatgttatcgtcgaagccctttcacaagga
tgtgatcttcatcaatcggaagcaacaaccaatccagatggcacgttcagaattcgtgga
cttcttcctgattgcgaataccaagtttatgctaaatccttcaccgatggatcccatgct
ccacacactttccctagacaattcacagtttcaatgactccagaagacgtcaaaggattg
gaattcattgccacaaagacggtcaaaactactgatattgcagtggaaattggaatggac
accctgccagaaatcttgtctgttcgagtggtcatcactcgaaatgacaacgaacacgtg
aaaacttccagtgttgttgctccacaacatctccattacctcgtgaatcttccacgtgac
ggagtcgaatatgcaattcgcgtggaaccagagaagcctccaaacgcatttgctgcaaag
acagtccgagttgttgctgatcaagcaatgaaagtagcacgtgtccctttgactacatcg
aaaagattgaatgatgttgatattagtgttggaactcttctctcattgccgttctttgtc
tccttggctttgatcttcttcaatcaaaatcgtgtcctcgaatatctggaagtcttcctc
gactgggctcgcaacacattctccccagctgctgataatcaatataaaagacggaagtaa
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