Caenorhabditis remanei (nematode): GCK72_019112
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Entry
GCK72_019112 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq04361
Axon regeneration
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09150 Organismal Systems
09158 Development and regeneration
04361 Axon regeneration
GCK72_019112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crq03019
]
GCK72_019112
03036 Chromosome and associated proteins [BR:
crq03036
]
GCK72_019112
Messenger RNA biogenesis [BR:
crq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
GCK72_019112
Chromosome and associated proteins [BR:
crq03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
GCK72_019112
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
GCK72_019112
microRNA pathway
RISC loading complex
GCK72_019112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoL2
Motif
Other DBs
NCBI-GeneID:
9839306
NCBI-ProteinID:
XP_053581794
UniProt:
A0A6A5GBE2
LinkDB
All DBs
Position
V:complement(11595241..11599000)
Genome browser
AA seq
1095 aa
AA seq
DB search
MSRGRRNYSDASYGQPRGGGYESGGRRENFDDEDQPRGQNNINRRGGSHRGYQHSRGEFH
HSDGRRGSDISRQMRQMSVGRGGNHRRGGRGGNMYSLQGPPRPRFERSSVGIANRGDLAG
SAHYPNMQVSRADMAHNKQTFFERPEGSVFERETLGWKTELWTNHALVHLPTQSFTIYEY
NIDVKKGKLLWTKRDEAGPTFRNICKKTEFLLPDSSYVFNDVNMLWSTKQLPCGSGVVGN
KERYHFIYKFTRSFQFGESVEHVDSQLFSTLIDAIATSRVRFPHKCKNKYKVFNRNMFMI
QDRQHDDIFEKAPIFVSLQNGIDIRTGISIGIKLNLRAGITACYDLSQTMFTRPCYPIIR
LLVEIIQGETISDEEFADKWDKQLIKSTVTEKNQKIMERILNKMLLRYTIENALKEDESR
KWEEENMKENNRYRKNKNDFTFFELVGTAERQTFIDDTTKKERTVAEYYLTEKNIRLRYP
NLPCIRKRSPKKFIAYPMEFVTMVVEPQRFDGYTTREMKAMMINRTSFTARQRRILLQHI
ISQKPITDIPAAVDNNDAFMRNFGVVIEKSMLKVNATVLPPPTVVYGGNDKFTDEHSEGA
WKALDREPMRKVLEGSVYVRTKDRNAPKLKKRLLGSILKIAAPGRNEAPDIDDTNYHNLM
KAIEKAGQPVVWENEEMGQAAIQNSWEFSQLKNEIEEIDKYFQSLLTHIDEKYKKEEDEV
IIPICFVIFESRFTTLKEKDSSIRNDYNVVKYLADNKSGIYTQGMLFDTFNQIGFLPASD
FTSLIVEKILGKVGTTHRKLDSEGKHKSWKQVTNPKSPTLILGVDVCHPNSRDRKDSEAG
VRKLSVASIVGNIDIECTEYRSTSKLQSVGEEKIVMFKHEVKARIDDFTIHNAIRPAHIV
VYRDGFSEGDFKRILYEEKLDIENACRLIDPAYQPTITYIVVTKRHHTRFFLTNESEGIE
EQGYNVLPGTLVEDTVTTKNYYDFYLTTQVGQVGLARPTHYYVLWNTWKCRDAFWPTLTH
ALTYTFCRTTTTVSVPAPVLYAHLAAKRAKETLDGAVELYRKDHERDYNMESYADVAELT
RQINNHPNLDGMIFV
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtggacgtcgaaactactcggatgctagttatggacaaccgagaggcggagga
tatgaatctggaggacgccgggaaaactttgacgatgaagatcaacctcgtggtcagaat
aacatcaatcgtagaggaggttctcatcgaggttaccaacacagtcgaggtgaattccat
cattcagatgggagaagaggaagcgatatttctcgtcaaatgagacaaatgagtgttgga
agaggcggaaatcatagaagaggtgggagaggtgggaacatgtattccctacaaggtcca
ccacggccacgattcgagagatcgtctgtaggaatcgccaatcggggagatcttgctgga
tcagctcattacccgaacatgcaagtttcacgagctgatatggcacacaacaaacaaaca
ttcttcgaaagaccagaaggatctgtgtttgagagagaaactttgggatggaaaacagag
ctctggaccaaccatgctcttgttcacttgccaactcaatcattcacgatttatgagtac
aatattgacgtgaaaaaaggcaaactactgtggactaaacgagacgaagctggtccaacg
tttcgtaacatttgcaagaaaacggaatttcttctaccagactcaagttacgtttttaat
gatgtgaacatgttgtggtcaaccaagcaacttccttgtggttctggagtcgtcggaaac
aaagaacgttatcattttatttacaaatttactcgaagtttccagttcggagaatccgtt
gagcatgttgatagtcaacttttctccacactcattgatgcgatcgccacttctcgtgtc
agattcccacacaaatgtaaaaacaaatacaaagtattcaatcggaacatgttcatgatt
caagatcgtcaacatgacgacatattcgaaaaagctccaatatttgtgtcactccaaaat
ggaattgacatccgaaccggaatttcgattggaatcaaattgaatttgagagctggtatc
actgcatgttatgatctatcccaaacaatgttcactcgtccctgctatcccatcatacga
cttctcgttgaaattattcagggtgaaacgatcagtgatgaagaattcgctgataaatgg
gacaaacaattgataaaatctactgtcaccgaaaaaaatcaaaaaattatggagagaatt
cttaacaaaatgttacttcggtacaccattgaaaatgccctcaaagaggacgaatctcga
aaatgggaagaggaaaatatgaaggaaaataatagatacagaaagaataagaatgatttc
acatttttcgaactggttggaacagctgaacgacaaacattcatagatgacactactaaa
aaagagagaacggttgcggaatactatctcactgagaaaaacatccgccttcgttatcca
aatctcccttgtattcgaaaacggtcaccgaagaaattcatcgcgtatcccatggagttt
gtaaccatggttgttgagcctcaacgtttcgacggatacacgactagagaaatgaaagct
atgatgattaataggacctcgttcaccgccagacagcgtcggattcttcttcaacacatc
atctctcagaaaccaatcacagatatccccgccgctgtggacaacaacgacgctttcatg
agaaactttggggtcgtcatcgagaaaagtatgctaaaagttaatgcaacagtgttgcca
ccaccaactgtcgtatacggtggaaatgataaattcacggacgaacactccgaaggggcg
tggaaagcactcgacagggagccaatgaggaaagttttggaaggttctgtatatgtgaga
acgaaagacagaaatgcaccgaagttgaagaagagacttttgggatcgattttgaaaatt
gcagcaccgggcaggaatgaagctccggatattgatgatactaattatcataacttgatg
aaagcaatcgaaaaagctgggcagcctgtcgtgtgggaaaatgaggaaatgggtcaagca
gccattcaaaatagttgggaattctcgcaactcaaaaatgaaatagaagaaatcgataaa
tatttccaatctcttctcactcatatcgatgaaaaatacaaaaaggaggaagatgaagtc
ataattccaatatgttttgtgatcttcgaaagtagatttactactttgaaggaaaaggac
agttccattcgtaacgattacaacgtggtgaagtatttggctgacaataaatcaggaatt
tacactcaaggaatgctcttcgatacgttcaatcaaattgggttcttgccggcttctgat
ttcacaagccttattgttgaaaaaatccttggaaaagtgggaacaactcatcgaaaactg
gacagtgaaggaaaacacaagtcgtggaaacaggttacaaatccaaagagtcccactttg
atccttggagtcgatgtctgccatccgaactctcgagatcgcaaggattcagaagcggga
gttcggaagttgtcagtagccagtattgtcggaaacattgatatagaatgtactgaatat
cgttctacctcgaaacttcaaagtgtcggagaagaaaaaattgtgatgttcaaacatgaa
gtgaaagctcgcattgatgatttcactattcataatgcaatccgtccagcgcatattgtg
gtctacagagatggattctcagaaggagacttcaagagaattctttatgaagagaaactt
gatattgagaatgcttgtaggttaattgaccccgcctaccaaccaaccatcacctacatt
gttgtcacgaagagacatcatactcggttctttttgacgaatgaatcagaaggaatcgaa
gaacaaggatacaatgtccttcctggaactctggttgaggacacagtgaccacgaagaac
tactatgacttctacctcactacgcaagtcggtcaagtgggattggctcgtccaactcac
tactacgtcctgtggaacacttggaaatgccgtgatgctttctggccaacacttacacat
gcacttacctacacgttctgccggaccacgacaactgtctctgtgccagctccggttctt
tatgctcatcttgctgccaagcgagcaaaggagacacttgatggagcagtcgaactttat
agaaaggatcacgaaagagattacaacatggaaagttacgcagacgtggctgagctcacc
agacagataaataatcatcctaatcttgatggaatgatctttgtataa
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integrated database retrieval system
