Caenorhabditis remanei (nematode): GCK72_019113
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Entry
GCK72_019113 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq04361
Axon regeneration
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09150 Organismal Systems
09158 Development and regeneration
04361 Axon regeneration
GCK72_019113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crq03019
]
GCK72_019113
03036 Chromosome and associated proteins [BR:
crq03036
]
GCK72_019113
Messenger RNA biogenesis [BR:
crq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
GCK72_019113
Chromosome and associated proteins [BR:
crq03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
GCK72_019113
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
GCK72_019113
microRNA pathway
RISC loading complex
GCK72_019113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoL2
ArgoN
Motif
Other DBs
NCBI-GeneID:
9839454
NCBI-ProteinID:
XP_053581795
UniProt:
A0A6A5GBS2
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All DBs
Position
V:complement(<11599860..>11603462)
Genome browser
AA seq
1093 aa
AA seq
DB search
MSYNRGGGGNFNDDRQSQHSGGRSQHGGSQHGGSQHGGSQHGGSQHGDRRDDYHDQRGGG
DYRHGGGSRQGGGYHQGDNLSRQMGQMNMGRDDNRGRGGHGGNRYSEQGPPRPRFERSTA
GVANPGDLAGSAHYPRQPVAKKDMMHTKQEFYERPAGKSVFEGKVGKKTELWTNHALVHL
PTEKYLIHEYNIEVFNNKKVLNKKEEVSPIFHEIRNSPEGRKQWPRSSDFIFNDVNLLWT
IDQLPYAQGEIRDKRKSILYKYTRSFEFGEGITQGDSQLLSTLIDAIATARCRYPKTCRN
KYTVYKRSMFMILDHKPPELESFDNAPLFMQVRNGMDARMGLSIGIRLNLRAGITACYDL
SHTLFTRPSYPLVRLFVDLIANATVSDEEFETSYDSSLKNSRVTEENKKNMMKVLHKMKL
CYSLDNVNPPQKRDFKFYDLTTPADRLSFTNEKGVSMTVAEYYLNEKNIRLRYPNLPCVQ
KKPSKANQNRLIAFPMELVSLLAEPKRYEGATTTEMKADMVRWTTFTAKQRRLVLQHVIS
QNRIGDVPPVVDNSDVHMKRHGVTIDKEMLSVNATILPAPTVVYGENVKFYDEHSVGDWK
AIDHIPIRKVLEDSVYLRNKDPSAPKLKKRLLGSILKIGAPASNAPMDFDDTCYHNLMKA
LEAAGQPVVWENEDMGQAAIQGVIEFNQSRDQPAVIYNYFVDLMTNIDEKYKKEDEIIIP
ICFVLFERRFTTLVNTTNHIRNDYNLMKYLADIHLGIFTQGMLHDTFQNIGSTPSTCKFT
RLLVEKILGKVGTTHRKLEREGDHKSWTKVTEPKEPTLFLGVDVSHPSPRDRDDPDAGVR
KMSVASVVGNIDLDCNEYRASSKIQSVGLERIVMLQNEVRNRITDFTIHNGIRPAHIVVY
RDGLSEGDFQRTLYEERIAIENACISIDAAFQPTITYIVVTKRHHTRFFLKDELDGIEEQ
GFNIRPGTLVEDTVTTKNYYDFFLATQVGEMGLVRPTHYYVLWNTWKCLPTFWPTVTHAL
TYTFCRSTTTVALPAPVLYAHLAAKRAKETLDGALVTFGMRDNKEFDMDVYQDVAILNEN
INNHQRLDGMVFV
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgagttacaaccgcggtggcggtggaaacttcaatgatgaccgccaaagtcagcatagt
ggaggaagatcacagcacggaggatctcagcatggaggatcccagcatggaggatcccag
catggaggatcccagcatggagatcgccgtgatgactaccacgatcaacgtggcggcgga
gactatcgtcatggagggggatcacgtcaaggtggtggatatcaccaaggagataatctt
tctcgtcagatggggcaaatgaatatgggaagagatgataatcgtggaagaggaggccat
ggaggaaacaggtactccgaacaaggaccaccacggccacgattcgagagatcaacggct
ggagtggcaaacccaggagatctcgcaggatctgctcactatccgagacagccggtggca
aagaaggacatgatgcacaccaagcaggagttctacgaacgaccagcaggcaaaagtgtg
tttgaaggaaaagttggtaagaagacagagctttggaccaaccatgctcttgtacacttg
cctacggagaagtatctcattcacgagtacaacattgaagtatttaacaacaagaaggta
ctcaacaaaaaggaagaagtgtcccctatcttccatgaaattcgtaactctccagaagga
agaaaacagtggccgagatcttcagatttcatcttcaatgatgtcaatcttttgtggacg
attgatcaacttccatatgctcaaggcgaaattagagacaaaagaaagagcattttatat
aaatacactcggagtttcgagttcggagaaggcatcactcagggagacagtcaacttctc
tccactcttatcgatgctattgcaactgctcgttgtcgatatccaaaaacgtgtcgaaac
aagtacaccgtttacaaaagaagtatgttcatgattctggatcacaaacccccggagttg
gaaagtttcgacaatgctccgttgttcatgcaagtgagaaatggaatggacgctcggatg
ggactttcaattggaatcagactcaatttgagagctggaatcactgcttgctatgattta
tctcacaccttgttcactcgtccaagctatccgcttgttcgtctcttcgttgatctcatt
gctaatgcaactgtcagtgatgaagagttcgagacaagctatgatagtagcttgaaaaat
tctcgtgtgacagaagagaataagaagaacatgatgaaagttctgcataaaatgaagctg
tgttattcacttgataatgtaaaccctccgcagaagagagatttcaaattctacgacttg
acgactcctgccgatcgattatctttcactaatgaaaagggagtttccatgacggttgct
gaatactatttgaacgaaaaaaatattcggctccgctatccaaacctaccatgtgtccag
aagaagccgagtaaggcaaatcaaaacaggttgatcgcttttccaatggagttggtctcc
ttgcttgctgaaccaaaaagatatgaaggagccacaactactgaaatgaaggctgacatg
gttcgttggactactttcaccgcgaaacaacgtcgtcttgttcttcaacacgtcatcagt
cagaacagaattggagacgttccgccagtagtcgacaactcggacgttcacatgaagaga
catggagtcactatcgataaggagatgctctccgtgaatgctaccattctcccagcgccc
actgtcgtatacggtgaaaatgttaaattctatgatgagcactccgtaggagattggaaa
gccatcgatcacattcctattcgtaaagtattggaggactctgtatacttgagaaacaaa
gatccgtcggcaccaaagctaaagaagagactgttgggatcaattttgaagattggagca
ccggccagcaatgcacctatggactttgatgatacctgctatcataacttgatgaaagca
ctggaagctgctggtcaaccagtcgtttgggagaatgaggatatgggtcaagcagccatt
caaggtgttatagagttcaaccaatccagagatcaaccagctgttatctacaactacttt
gttgatctcatgaccaacatcgatgagaaatacaagaaggaggatgaaatcattatcccg
atatgttttgtgctctttgaaagaaggttcacaactctcgtgaatactaccaatcacatc
agaaacgactacaatctgatgaaatatttggcggatatccaccttggaatcttcactcaa
ggaatgttgcacgacacattccagaatattgggtcgacaccatccacgtgtaagttcact
cgcctcctcgtcgaaaaaattcttggaaaagttggaacaactcatcgtaaacttgagcga
gagggtgaccacaagtcctggacaaaagtaacagaaccaaaggaacccactttgttcctt
ggagtcgatgtttctcaccccagtccacgtgatcgcgatgacccagatgctggagttcgg
aagatgtcggtagccagtgttgttggaaacatcgatttagattgcaacgaatatcgtgct
tcctccaagattcaaagtgttggtttagaaagaattgtaatgctacaaaatgaagtccga
aatcgaatcaccgacttcaccattcataatggtattcgcccagcacacattgtggtctac
agagatggattgtcagaaggagacttccagagaactctctacgaagaaagaatcgcaatt
gagaatgcctgcatctcaatcgacgccgctttccaaccaactatcacctacattgttgtc
acgaagagacatcacaccagatttttcctcaaggatgagctggatggaatcgaggagcaa
ggcttcaacatccgtccaggaacattggttgaagacacagtgaccacgaagaactactat
gacttcttcctggctacccaagtcggcgaaatgggcctagttcgccctacccactactat
gtgctgtggaacacatggaaatgtctcccaacattctggcctacagtgacccatgcactc
acatacaccttctgccgatccacaacgactgttgctcttccagcacctgtgctttacgcc
catcttgctgccaagagagcaaaggagacacttgatggagctcttgtaactttcggaatg
agagacaacaaggagttcgacatggatgtctaccaagacgttgctatcctcaacgaaaac
atcaacaaccatcaacgtctggatggaatggtcttcgtctag
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integrated database retrieval system
