Caenorhabditis remanei (nematode): GCK72_019116
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Entry
GCK72_019116 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
crq00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
crq01100
Metabolic pathways
Module
crq_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
GCK72_019116
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
GCK72_019116
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
crq01003
]
GCK72_019116
Enzymes [BR:
crq01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
GCK72_019116
Glycosyltransferases [BR:
crq01003
]
O-Glycan biosynthesis
Glycosaminoglycan
GCK72_019116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Branch
WSC
Xylo_C
Motif
Other DBs
NCBI-GeneID:
9839179
NCBI-ProteinID:
XP_003115491
UniProt:
A0A6A5GCI8
E3LKP3
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All DBs
Position
V:11625325..11629968
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AA seq
809 aa
AA seq
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MVIFGVNATYRHAAFVISLFFFLNVYLLYSAQNTVQNASHSGDRDVNVANHNSNSIETSI
PTCEITDDLAKSAISRATSSSCKSKLQLEACLLKNGTFTETFPESECSNHENHLIDQRIG
CYSDKKDSRVLKEFEYKFPKSNGKSTCRKNCYKAGFLYYGLEFGQECFCGNDVTNATEID
DKDCQTYKCPGSEQDFCGGFNAVEIFRTGLKSKVHMMKPQYLAPGEGEPLKDSIKILFLL
QLNGRNERQVKRFLKSIYLPHHYYYIHVDKRQNYMYSEMKKVAEKIPNIHVTDRRFSTIW
GGASLLQMFQQVIRDSLEMEQFKDWDYIFNFSESDFPILPIQDFEKLITVHKGKSFLASH
GYNTGKFIQKQGFEWVFSECDQRMFRIGKREFPQNLRIDGGSDWVGIHRDLAEYSISDDE
LPKKLRKIFESILLPLESFYHTLSFNSRFCDDLLMSNLRLTNWYRKQGCRCASLKQIVDW
CGCSPLVFREETKNKFELQKAISKPTYFARKFDSMIDIESIESAELQSMSPEKLQLDHPT
YHFAFANIFKNGIDEEKIHFRSLANFALKSIKSDDELKKIVQLDALRAHHNAQIEIVMKV
KTSSDSVEFLIHRKTHVKFLTESSLEVNGYQLKEMTYGTKFEWKEEICREYMGFVTDKDT
LHARLEWKSTERVKKNGDKTSPEVEFKYRKGDELIEKTVVKPYDSVFGGQFDSWNVGKKL
SNISTCDNFFVDVISPSSSPDSLPLATLRFPVYTEQNVDCHESYLQDFFEIVDFCTSEAA
CKEKIWSTSYPDPKSDIIVGYDSEARTLK
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggtgattttcggagtgaacgcaacatatcgacatgcagcatttgtgatatctttattc
ttcttcctaaacgtgtatttattgtattcggctcaaaatacggttcaaaacgcatcacat
tcaggagatagagatgtaaacgtggcaaatcataactcaaattctatcgaaacttctatt
ccaacatgtgaaatcaccgatgatctggcgaaaagtgcgatttctagagccacatcgtca
tcttgcaaatcaaaactccaactggaagcttgtcttctgaaaaacggaacattcactgaa
acatttcctgagagtgaatgttctaatcacgaaaatcacttgattgatcagaggattgga
tgttattcggataaaaaagattctcgagttttgaaagaattcgaatacaaattcccgaaa
tcaaatggaaaatccacttgtcgaaagaactgctacaaagcaggatttttgtattatgga
ttggaatttgggcaagaatgtttttgtgggaatgatgtgacgaatgctaccgaaattgat
gacaaagactgtcaaacttataaatgtcctggctcagaacaagatttttgtggaggattc
aacgccgtcgaaattttcagaactggcttgaaatcaaaggtccacatgatgaagcctcaa
tacctggctccaggagaaggtgaaccgctgaaagactcaatcaaaatcctgtttcttctc
caattgaatggtcgaaatgagcgtcaagtgaaaagatttctgaaatcaatatatcttcca
caccattattattacatccacgtggataagcgacagaattatatgtattcagagatgaag
aaagtcgctgaaaagattccgaatattcatgtcactgatcgccgattcagtacaatttgg
ggtggagcctcccttcttcaaatgtttcaacaagttattcgagattctttggaaatggaa
cagttcaaggactgggattatattttcaatttctctgaaagtgattttccaatattgcca
attcaagattttgagaaattgattacagtacacaaaggtaaatcattcttggcttctcac
ggctacaatacgggaaaattcattcaaaagcaaggatttgaatgggtgttctccgaatgt
gatcagagaatgttccgtatcggaaagcgtgaatttcctcaaaatttgagaattgatggt
ggatcagattgggttggaatacatcgagatctcgcagaatactcgatttctgatgacgag
ctgccaaaaaagttgagaaaaatttttgaaagtattctccttccactagagagtttctat
catactctatcattcaattcgagattttgtgatgatttgttgatgagcaatcttagatta
acgaattggtatcgaaagcaaggatgccgatgcgcctcattaaagcaaattgtcgattgg
tgtggttgttcaccgttggtttttcgagaagaaacaaagaataagtttgagttacagaaa
gctatctcaaaaccaacttattttgctcgtaaatttgatagtatgattgacattgaatcg
attgaatctgccgaattacaatcaatgtcacctgagaaacttcaattggatcatccaacc
tatcattttgcatttgccaatatcttcaaaaatggaattgatgaggaaaagattcatttc
agaagtctggcaaacttcgcattgaaatcaattaaatccgacgatgaactaaagaaaata
gtgcaattagacgctcttcgtgctcaccataacgctcaaattgaaattgttatgaaagta
aaaacgagctcggacagtgttgagtttttgattcaccgaaaaactcatgtcaaattctta
actgaaagtagtttggaggtcaatggttaccagttgaaagaaatgacatacggaacaaaa
ttcgaatggaaagaagaaatttgcagagagtatatgggatttgttacagataaagataca
ctccacgctcggctagaatggaaatcaactgaaagagtgaaaaagaatggagataaaacg
agtccagaagttgaattcaagtacagaaaaggagatgagttgattgaaaagacagttgtg
aaaccatatgactcggtcttcggaggacagttcgatagttggaatgttggcaaaaaactt
tccaacatctccacctgtgacaacttcttcgtcgacgtcatttccccatcgtcttcaccc
gattccctccctcttgctacccttcgttttcccgtttacaccgaacaaaatgtcgattgt
cacgaatcttatcttcaggacttttttgaaatcgtcgacttttgtacatctgaggcagca
tgtaaagagaaaatttggagcacaagttatccggatccaaaatctgatatcattgttgga
tacgattcggaggctagaactctgaaatag
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