KEGG   Caenorhabditis remanei (nematode): GCK72_019380
Entry
GCK72_019380      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K14290  exportin-1
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq03008  Ribosome biogenesis in eukaryotes
crq03013  Nucleocytoplasmic transport
crq03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:crq00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    GCK72_019380
   03008 Ribosome biogenesis in eukaryotes
    GCK72_019380
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    GCK72_019380
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:crq03019]
    GCK72_019380
   03009 Ribosome biogenesis [BR:crq03009]
    GCK72_019380
   03016 Transfer RNA biogenesis [BR:crq03016]
    GCK72_019380
   03036 Chromosome and associated proteins [BR:crq03036]
    GCK72_019380
Messenger RNA biogenesis [BR:crq03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     GCK72_019380
Ribosome biogenesis [BR:crq03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    GCK72_019380
  Pre-60S particles
    GCK72_019380
Transfer RNA biogenesis [BR:crq03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    GCK72_019380
Chromosome and associated proteins [BR:crq03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     GCK72_019380
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 IBN_N CRM1_repeat
Other DBs
NCBI-GeneID: 9839303
NCBI-ProteinID: XP_003115648
UniProt: E3LKD1 A0A6A5GDT7
LinkDB
Position
V:complement(12594066..12597043)
AA seq 907 aa
MEVLAQAKLQFAQNDRIDVNLLDQVVRIMNQMSGKEQAEANQILMALKEDRDSWTKVDAI
LQYSALNESKYFALQILEAVIQHKWKSLPQVQRDGIKSYIVSKMLELSAEQSIMEQNQLL
LHKMNLVLVQIVKQDWPKQWPTFITDIVESSKTNETVCINNMNILSLLSEEVFDFGSQNL
TQAKEQHLKQQFCGQFQEVFTLCVNILEKCPSNSMVQATLKTLQRFLTWIPVGYVFETDI
TELLSANFLSLEVYRVITLQCLTEISQIQVETNDPSYNEKLVKMFCITMKHISSVLSVDL
DLAAVYKDASDQDQKFISSLAQFLVAFIKEHVHLIEVTEEVIPENKRIVREAHDFAIQIL
LKITMIEEMEVFKVCLDCWCWLTAELYRISPFIQPSSLYGMMSTNREHPRRRLYREYLSA
LRTTMISRMAKPEEVLIVENDQGEVVREMVKDTDSIALYRNMRETLVYLTHLDNKDTEMK
MTEKLASQVNGGEFSWKNLNRLCWAVGSISGTMIEEDEKRFLVLVIRDLLGLCEQKRGKD
NKAVIASNIMYVVGQYPRFLRAHWKFLKTVINKLFEFMHETHEGVQDMACDTFIKIAIKC
KRHFVIVQPAENKPFVEEMLENLTGIICDLSHPQVHVFYEAVGHIISAQIDGSLQEALIM
QLMEIPNRTWNDIIASASTNDSVLEEHEMVKSVLNILKTNVAACKSIGSAFVTQLGNIYS
DLLSVYKILSEKVSRAVTTAGEDALKNPLVKTMRAVKREILILLSTFISKNGDAKLILES
IVPPLFDAVLFDYQKNVPQAREPKVLSLLSILVTQLGSLLCPQVPNILGAVFQCSIDMIN
KDMEAFPEHRTNFFELVLSLVQECFPVFMGMPQEDLSTVIDAVVWAFQHTMRNVAEIGEF
IHKKEKI
NT seq 2724 nt   +upstreamnt  +downstreamnt
atggaagttctcgctcaagcaaagcttcaattcgctcaaaatgaccgcatcgacgtcaac
cttttggatcaagttgtccgaattatgaaccagatgagcgggaaagaacaagccgaggcc
aaccaaatcctcatggcactcaaggaagaccgtgattcatggaccaaggtcgacgcaatt
cttcaatactcggctctcaacgaatccaagtatttcgctcttcaaattttggaggctgtc
atccaacataagtggaagtcgttgccacaagttcaacgagatggaatcaagtcttacatc
gtttcgaaaatgcttgaactgtcagctgaacaatcgattatggagcagaatcagttgctt
ctccataagatgaacctggtgttggttcaaattgtcaaacaagattggccaaagcaatgg
ccgacgttcatcactgatatcgttgaatcgtcgaagacaaacgagactgtttgcattaac
aatatgaatattttgagcttgttaagcgaggaagtattcgacttcggttcccagaacttg
acccaagccaaggagcaacatctcaaacaacaattttgtggacagttccaagaagtattt
actttgtgtgtcaacattctcgagaagtgcccatcgaattcgatggttcaagcaactctc
aaaacattgcaacgcttcttgacctggattcctgttggatacgtttttgaaacggacatc
actgaattgctgtcagcgaacttcctctcgttggaggtttatcgtgtcatcactcttcaa
tgtctcacagagatctctcaaattcaagttgaaaccaatgatccaagctacaatgagaaa
cttgtcaaaatgttctgcattacgatgaagcatataagttctgttctttccgtcgatctt
gatttggccgctgtctacaaggacgcttccgatcaagaccagaagttcatcagcagcttg
gctcaattccttgttgctttcatcaaagaacatgttcatttgatcgaagttactgaagaa
gtgatacccgaaaacaaaagaattgttcgtgaggctcatgactttgcaattcaaattctt
ttgaaaatcacaatgatcgaggaaatggaagttttcaaagtttgccttgattgctggtgc
tggctcactgctgaactttatcgtatctcaccattcattcaaccaagttccctctacgga
atgatgtccactaaccgcgagcatccacgacgtcgtctctatcgcgagtatttgtcagct
ctccgtacaacaatgatctccagaatggcgaagccggaagaagtgttgattgttgaaaat
gatcaaggagaagttgtccgtgagatggttaaggacacagattccattgccttgtaccga
aacatgcgtgaaactcttgtctatttgacccatcttgacaacaaggatactgaaatgaag
atgactgaaaaactcgcatcacaagtaaacggaggagagttttcttggaagaatctcaat
cgactgtgctgggcagttggttcaatttctgggacgatgattgaggaggatgagaagaga
ttcttggttcttgtcattcgtgacttattgggtttgtgtgagcagaagcgtggaaaagat
aacaaagcagtgattgcatcgaatataatgtacgttgtgggacaatatccacgattcctc
cgagctcactggaaatttttgaagacggtcatcaacaaattgttcgagttcatgcatgaa
acccacgaaggagttcaggatatggcttgtgatacctttatcaaaatcgccattaagtgc
aagagacactttgtgatcgttcaaccagctgaaaacaaaccattcgttgaagaaatgctc
gagaatttgactggaatcatttgtgatttgtctcatccacaagtgcacgtcttctatgaa
gccgttggacacatcatttctgctcagatagacggaagccttcaagaagcactcatcatg
caactcatggagattccaaaccgaacttggaacgatatcatcgcatccgcttcgaccaat
gacagcgttcttgaagaacatgagatggtgaaatcagttctcaacattctcaagaccaat
gttgccgcttgcaaatccattggatccgcttttgtgactcagcttggaaacatttacagt
gatttattgtccgtttacaaaattctctccgaaaaagtgtcccgtgcagtaacaacagcc
ggagaagatgcactgaagaatcctctagtgaagacgatgcgcgcagtgaaacgagagatt
ctgattcttctctccacatttatatcgaagaatggagatgctaaactcattctggagagc
attgttccaccacttttcgatgctgttctcttcgattatcaaaagaatgtgccacaagca
agagaaccgaaagttctttcattgctcagcatccttgtcactcaacttggttctctcctg
tgcccacaagtccccaacattcttggagccgtcttccaatgcagcatcgacatgatcaac
aaagatatggaagctttcccagaacatcgaaccaacttcttcgaattagttctatcgttg
gttcaagagtgtttcccagtcttcatgggaatgccacaagaagatctctcaactgtcatt
gacgctgtcgtctgggctttccaacacacgatgcgtaatgttgcagaaatcggtgagttt
attcacaagaaagaaaaaatatga

DBGET integrated database retrieval system