Caenorhabditis remanei (nematode): GCK72_019381
Help
Entry
GCK72_019381 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K23720
UV-stimulated scaffold protein A
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GCK72_019381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crq03400
]
GCK72_019381
DNA repair and recombination proteins [BR:
crq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
GCK72_019381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
Motif
Other DBs
NCBI-GeneID:
9839191
NCBI-ProteinID:
XP_053581910
UniProt:
A0A6A5GDL7
LinkDB
All DBs
Position
V:12599057..12601341
Genome browser
AA seq
583 aa
AA seq
DB search
MQTEDVYKSGIRKNLNRVLRELTDDGKLDFESVPYQNLKLEIGKKDEELTEMFSEVLMET
SSRSGCADRYIVLQLISDFFMSSRLFRNTILDDPTEFLELMVETNPIRNPLPGSKEDSNK
LKAEAILVVKKWEEKYWQSDCRMKCLVVTLKKTKFVDYDNLNKKIEEERRRKDLMEERKA
MIIERTLSLYKSKFNEIKEDVERLKMELETTMQMLVPSFTDSDEPSALLPSEIPSTSSTS
TKSFEIVISDLAPIIKVSPENDAIVETFLGAKLLLIHRVQTLRKIAKRLIPLKEPGESLA
QKIINYRDSIKQLVLKADEIRIKEDKNKAKSIKQKKEKGRFDDDFIDVEISIDDILMLQY
AEKIDEDDEDVSEIQKVEKKKEKKIKEEPKLKSVPFGLDLKYWGEERKNVEVPKNNADCH
RFWRSADESTVSGTVHQTIYTQRQFTFVGEAPKIDKECRAKLRNGYLCRRKDLHRCPLHG
KIVDRDAEGVPVNPEDRHNDNERNERKRLKEAEEYSKKIMKDYESKTKRKKKYEVESTSS
QDIRSRLQRKLLDPKTIQRVSADITSSQKNRLVKNFSHQFSHL
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacagaagatgtttataaatcagggatacgaaagaacttgaaccgggttttaaga
gaattgacagacgacgggaagctagacttcgagtcagtgccgtatcaaaatttgaagtta
gaaattgggaaaaaagatgaggagcttacggagatgttttctgaagttctcatggaaact
tcgagtagatccggatgtgcagatcgatacattgttcttcaactcatcagcgacttcttc
atgagttctcgtctcttcagaaacacaatacttgacgaccccacggaattcctagagcta
atggtcgagacgaatccgattcgaaatccacttcccggttcgaaagaggattcaaataaa
ttgaaagccgaagcaattcttgttgtcaagaaatgggaagaaaaatactggcagagtgat
tgcagaatgaagtgtttggtggtgactctgaagaaaacgaaatttgtagactacgataat
ttgaacaagaaaatcgaagaagaaagaaggaggaaggatttgatggaagaaagaaaggct
atgattattgaaaggacactatctttgtacaaatcgaaattcaacgagatcaaagaagac
gtggaacgactcaaaatggaactagaaaccaccatgcagatgctggttccatcgttcacg
gattctgatgaacccagtgcattattgccttctgaaataccatcaacatcatctacttct
accaaatcatttgaaattgtcatttcggacttagcaccaataatcaaagtttccccagag
aacgatgctatcgtcgagacatttctcggtgcaaaattgttgctgattcatcgagtgcaa
acgctcagaaaaattgcaaaacgactaattcctttaaaagaaccgggcgaatctctggct
cagaagattataaattatcgagattccatcaaacaactggtattgaaagcagacgaaata
cggataaaagaagacaaaaataaagcgaaatcgataaaacagaagaaagaaaaaggaaga
tttgatgacgattttattgatgtcgaaatttcgatcgatgacattttgatgttacaatat
gcagaaaagattgatgaggatgatgaagacgtttctgaaattcaaaaagttgagaagaaa
aaagaaaagaaaattaaggaagagccgaaattgaaaagtgtaccgtttggattagatctg
aaatactggggagaagagaggaaaaacgtggaagtgccgaagaacaacgctgattgtcat
cgattctggaggtctgccgatgagagcactgtatctggaacagttcatcaaacgatttac
actcaacgacagttcacatttgttggagaagccccgaaaattgacaaagaatgtcgtgcg
aagttgcggaatggatacttatgtcgcaggaaagatcttcatagatgtcctcttcacggg
aaaatcgtcgatcgggatgccgaaggagtccctgtaaacccagaagaccgtcataacgat
aacgagagaaatgagagaaaacgactgaaagaagcagaagaatacagtaagaagataatg
aaagactatgaatcaaaaacaaaacgaaagaagaaatatgaagtggaatcaacgagttca
caagatatcagaagtcgtcttcagaggaaactactcgatccgaagacgattcaaagggtt
tctgccgatattacgagttcgcagaagaatcgattggtgaagaatttctcgcatcagttc
tctcatttgtag
DBGET
integrated database retrieval system