Caenorhabditis remanei (nematode): GCK72_019838
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Entry
GCK72_019838 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GCK72_019838
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crq02000
]
GCK72_019838
Transporters [BR:
crq02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
GCK72_019838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
Zeta_toxin
AAA_29
AAA_25
DUF87
RsgA_GTPase
AAA_18
AAA_16
AAA_23
OppC_N
SP_C-Propep
Motif
Other DBs
NCBI-GeneID:
9820623
NCBI-ProteinID:
XP_053582167
UniProt:
A0A6A5GFM2
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All DBs
Position
V:complement(14008751..14012678)
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AA seq
666 aa
AA seq
DB search
MSLLSHLSRLCCSRCSSIPSSSTRLFCYAPQVGRTTGFLRSTVIKSKQAFRNVSVVETKR
ESYKLKNASWKDLKAILSLAGPYKWRIMLGISFLGVSSTIFLLTPRVLGKLIDEWDETKQ
DKMDQTDKSLILARYFKENPVALVGVLMLGALAIAARIYCMHTAGQLVINDLRKTVFNSV
LRQDMAFFDKNKVGEIVSRLSTDALIVGYSVSMNLSDGARALLTCLGSGGLMVYTSLAMC
KVIVVVVPVIVGTFAVFGKLQRKYTLMMQEAVAGANQVATERLSSVRTVRMLVAEKKELA
AYSDKINDIWLISKKEGFAKGCMFGSFQFTGYLSLSSILFYGSNLISQGLLTYGELSSFC
LYAVLSAGSLSAMSGFYLELMKGLGASNRLFELKDREPKIPLEGGIQKGNVQEAIRFEHV
AFGYADRDPLFHNISFDVPAGKITAVVGSSGSGKSTIASLLLRLYDPTSGRILVDGVDLK
DLDPSYWRRHIGTVGQEPVLFSTTIRDNIIYGSTEPDKVSEAEIVSAADQSNADEFIMRF
PQKYDTKVGEHGSTLSGGQKQRIAIARALVNKPNILIMDEATSALDASSEYLVRIALNKL
LANSKQTVMIIAHRLSTIKHADQIVVVDKGSVAECGSYEELIAIKDGIFRKLVEKQTFGF
KDQDSY
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttctatcacatttgagcagactatgctgctccaggtgttcttcaataccttct
agctcgacgagactgttctgttacgcaccacaagtcggaagaacgacgggattcttgcga
agtacagtgataaaatcaaagcaggcttttagaaatgtcagcgtagtagaaacaaaacga
gagtcatacaaacttaaaaatgctagttggaaagatttaaaagcaattttatcacttgct
ggaccttacaaatggagaattatgttgggaatctcatttctcggagtcagcagtaccatt
ttccttctgacaccacgagttcttggaaaactgattgatgaatgggatgaaacgaaacaa
gacaaaatggatcaaactgacaaatcattgattctcgccagatatttcaaagagaatcca
gtagcacttgtaggagttttgatgcttggagcattggcaattgctgccagaatttattgc
atgcatacagcaggtcagcttgtaatcaacgatctgcgcaaaacagtgttcaacagtgta
cttcgtcaagatatggcatttttcgataaaaataaagttggagagattgtttctcgactt
tctacagatgcacttattgttggatattctgtttcaatgaacttgagtgatggagctaga
gcattgcttacctgtcttggttccggcggtcttatggtatacacttccctcgccatgtgc
aaagtgattgttgtcgtcgttccagtcatcgtcggtacatttgcagttttcggaaaacta
caaagaaaatacacacttatgatgcaagaagcggttgctggagctaatcaagtagccact
gaacgtctttcatcagttcgaactgtcagaatgttggtagcagaaaagaaagaattggct
gcatattcagacaaaatcaacgatatttggttgatttcaaagaaagaaggattcgcaaaa
ggatgcatgtttggatcgttccaatttaccggatatttgtcattatcctcgattcttttc
tatggaagtaatctaatcagtcaaggacttctcacttatggagaactatcttcattctgt
ctgtacgcagttctcagtgctggaagtctgtcagcgatgtctggattctatctggaattg
atgaaaggacttggtgcaagtaatcgactcttcgaactcaaagatcgtgaaccaaagatt
ccattggaaggaggaattcagaaaggaaatgtacaggaagcgattcgtttcgagcatgtt
gcattcggatatgctgatcgtgatcctctattccataacatctcattcgatgttccagct
ggaaagatcactgcagttgttggatcttcaggatctggaaaatcaacaattgcatcactt
ttattgagactttatgatccaacaagtggacgaattcttgtcgatggagttgatttgaag
gatttggatccatcatactggcgaagacatatcggaactgttggacaggaaccagttctg
ttttcaacaactatcagagataatatcatttacggaagtacagaacctgataaagtatct
gaagcagagattgtgtcagctgcagatcaatcgaatgctgacgaattcatcatgagattc
cctcaaaaatacgatacgaaagttggcgaacacggttcgacattgagtggaggacagaag
cagagaattgctattgcaagagcccttgtgaataagccgaatatactcattatggacgag
gcgacgtcagcattagatgcttcttctgaatatcttgttagaattgcactcaataaatta
cttgccaatagtaaacagacagttatgattatcgctcatagattatccacaatcaaacac
gccgatcaaatcgtcgttgtcgataaaggaagtgtggcggaatgtggaagttatgaggaa
ttaatagctatcaaggatggaatttttagaaaattagtggagaagcagacgtttggattc
aaggatcaagattcatattga
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