Caenorhabditis remanei (nematode): GCK72_021594
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Entry
GCK72_021594 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GCK72_021594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crq03021
]
GCK72_021594
Transcription machinery [BR:
crq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
GCK72_021594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
Motif
Other DBs
NCBI-GeneID:
9828081
NCBI-ProteinID:
XP_003098139
UniProt:
A0A6A5GIK8
E3N0K1
LinkDB
All DBs
Position
V:20468589..20469754
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AA seq
268 aa
AA seq
DB search
MTSTTRKRYDNDVDCELAKRSIWLVKVPRYLSELWEANEGHVVGKLQIGAQVEFLTAKGL
IQPTPKDEGEGTSAAASAANAEASEIPTQYSFILHDVKSQTMSVLSEDKQALGSEATVKT
GRLAIEGRIIKKAECRPPATSKYMKMKLAHIVKNTQPKKTVKMIDKAAVKFKPVSVHAED
MIKSKQKKDGAKTYRADRDVLRQALFKAFEKHSFYRLQDLQQLLQQPVSYVKEVLQEIAV
YNTAPPHKSLWCLKPEYCNYKVNAQSEQ
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgactacgcggaaacgttacgacaacgatgtcgattgtgagctggcaaaacga
agcatttggctggtaaaagtgcccagatacttgtcagaattgtgggaggccaacgaagga
catgtcgtcggaaaattgcaaatcggagctcaagtggaatttctgacagccaaaggactc
attcaaccgacgccaaaggacgaaggagagggaacgtcagcagcggcatctgcagccaac
gcggaagcttcagaaattccaactcagtactcattcattcttcatgatgtcaaaagtcag
acaatgagtgtgttgagtgaggataaacaagcacttggaagtgaggcaaccgtgaaaact
ggacgactagctatcgaaggacgaatcataaaaaaggcggaatgtcgcccaccggcaacg
tctaaatatatgaagatgaaattggcgcatattgtcaagaatacacagccaaagaagacg
gtgaaaatgattgataaggcggcggtgaagttcaagccagtatcggtgcacgcagaggat
atgataaagagtaaacagaagaaggatggagcgaagacgtacagagctgatcgggatgtc
ctcagacaggcgttgtttaaggcgttcgagaagcacagtttctacagactccaagatctc
cagcaactccttcaacaaccggtcagctacgtcaaagaggttctccaagaaatcgccgtc
tacaacacggcgccaccacacaagtcactgtggtgtctgaaacccgagtattgtaactac
aaagtcaatgctcaatctgaacaatga
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