Caenorhabditis remanei (nematode): GCK72_021949
Help
Entry
GCK72_021949 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K12589
exosome complex component RRP42
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GCK72_021949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crq03019
]
GCK72_021949
Messenger RNA biogenesis [BR:
crq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
GCK72_021949
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
GCK72_021949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
9816246
NCBI-ProteinID:
XP_003105290
UniProt:
E3MEZ4
LinkDB
All DBs
Position
V:complement(22039234..22041830)
Genome browser
AA seq
314 aa
AA seq
DB search
MEVHISDDEKLFLIHGVEQDIRNDGRACADFRPMILERGVLSGTNGSCRVQLGQTTDVLA
GIKLELEAYDPIAEKQPKQPMSFHVDFSANASSQFAGKGGDQYGEELSAAFQVAYSRSLD
IIPNLSKTQLAAGYRWKIHVDISVLQWAGSVPDACSLAIIGALSDLEIPEVDVTPDDGGK
VSIVLKRPRIGGDVRDEEVPVAMWKLIVTSCPMLLTVSKIGTANLVDCSPEEECCIRSQL
LIGVAKNLESTPESDDANEYDITCVKQHGGGLLEMESIDDMTKLATRTAKGLYEAIGNRL
NTEERRKPGHSFLL
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggaagtacacattagcgacgacgaaaagctattcctaatccacggcgtcgaacaggac
atccggaatgacggacgtgcgtgtgcagattttcgaccgatgattctcgagaggggcgtc
ttgtcgggaacaaatggaagttgtcgagtgcaattgggacagaccactgatgttttggct
ggaatcaagctggaactcgaagcatacgacccgatcgctgagaagcaaccgaaacagccg
atgagtttccacgtggatttctcggctaatgctagcagtcaattcgcgggaaaaggaggt
gatcaatacggtgaagagctctctgcagcctttcaagtcgcctactcccgctcacttgac
atcattccaaacctatcgaaaactcaactggccgccggttatcgctggaaaatccacgtg
gacatttcagtattacaatgggcgggaagtgttccagacgcgtgtagtctcgctatcatt
ggagcgttgagtgatctagagataccagaagtcgatgtgacaccagatgacggtggaaaa
gtgtcgattgtgttgaaacgaccgagaatcggaggagatgtgagagatgaagaggttccc
gtggcgatgtggaagttgattgtgactagctgcccaatgctcctaacagtctcaaaaatt
ggcaccgccaaccttgtcgactgctcgcccgaagaggaatgttgtattcgatctcaacta
ctaattggtgtcgctaagaatctcgagtcaactccagaatccgacgatgccaatgagtac
gacatcacatgtgtcaaacaacacggtggtggtcttctggaaatggaatcgatcgatgat
atgacgaagttggcgacgagaacggcgaaaggattatatgaagcaatcgggaatcggttg
aatacggaggagagaaggaagccgggacactcttttttgctataa
DBGET
integrated database retrieval system