KEGG   Caenorhabditis remanei (nematode): GCK72_022014
Entry
GCK72_022014      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:crq00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    GCK72_022014
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:crq03021]
    GCK72_022014
   03036 Chromosome and associated proteins [BR:crq03036]
    GCK72_022014
Transcription machinery [BR:crq03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     GCK72_022014
Chromosome and associated proteins [BR:crq03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    GCK72_022014
   PBAF complex
    GCK72_022014
   GBAF(ncBAF) complex
    GCK72_022014
SSDB
Motif
Pfam: SWIRM-assoc_1 SWIRM-assoc_3 SWIRM Myb_DNA-binding Myb_DNA-bind_6 Myb_DNA-bind_7
Other DBs
NCBI-GeneID: 9816695
NCBI-ProteinID: XP_053583522
UniProt: A0A6A5GLN4
LinkDB
Position
V:22283502..22286466
AA seq 829 aa
MKKGASKRRRDDDDGDVSMTGDDDDSRSGAAVKVEVPKGKEKEAEFTAPKGQKLTDLDDE
GVATAREPHSSEGNVIEQTHYIVVPSYAAWFDYNAIHQIEKRAMPEFFNGKNKSKTPDVY
VAYRNFMIDTYRLNPFEYVSATACRRNLAGDVCSIVRLHSFLEQWGLLNYQVDSDARPAP
VAPPPTSHFMVLADTPTGIQPMNPPHINAANAAREGEVKDEIKTEIDSITEPGLKTDQYQ
KQAMALRTKGANPGRDWTDQETCLLLEALEMFKDDWNKVCDHVGTRTQHECVMKFLQLPI
QDPYLADSASAGDAGAKEVLGPLAFQPIPFSQSGNPVMSTVAFLASVVDPQVAAAATKAA
MEELAKLKEEIPPLVVEAHEKNVAAMAEKTGQIDGSIGLTKSGLKPVDDGEGTSTSGAPA
GDAEEKMDTSEKPAEGSIPSTEKAKSDIDKEVQAAAASCLAAAAVKAKHLAQIEERRIKS
LVAQLVETQMKKLEMKLRHFDELEQIMDKERESLEYQRHQLILERQAFHMDQLKYLENRA
KHEAHTRLTTAGTLPAGLPPGFEVTGPPQPTPQVQISAQEAGPEKMDTTEARAPSVHAPP
PAPQQMLPPQQPPPQQIPPPVQQQQPPQQQIQPPQQMPPQQQMPPPQQQQQQLPPTPQQV
PPQQQAPPPQGYPGGPPQGYPQPGQQQGPPSQQGQPGGYPPPPQSRYPQGPPPPQQGYPG
YPPPQGHYPGQPGPGQQYYAPQGQPQYHPGAYPPPQQRPPYQASPYPGPPQARAPYGYPP
QQGHPGYPGPPQQYGGMPPHGQYPPQQGGPMGPPHQPHEEGGQGDQKQE
NT seq 2490 nt   +upstreamnt  +downstreamnt
atgaagaaaggcgcatcgaaacgcaggcgcgacgatgacgatggcgatgtttcgatgacg
ggcgatgatgatgatagcagaagtggtgcagccgtgaaagtggaagtgccgaaaggaaaa
gaaaaagaagctgaattcaccgctccaaaagggcaaaaactaaccgatctcgatgatgaa
ggtgtggcaaccgcccgtgagcctcactcatccgaaggaaacgtcatcgagcagacacac
tacattgtcgtaccctcctatgctgcatggttcgattacaacgcaattcatcaaatcgag
aaacgcgcgatgcccgaatttttcaacggaaagaacaagagcaaaacgccggacgtctac
gttgcttatcgtaactttatgattgacacctatcggctgaatccgttcgaatacgtgtct
gccacagcgtgtcggcgaaatttggctggagatgtgtgctctatagtcaggttgcactcg
ttcctggagcaatgggggcttctgaattatcaagtggattcggatgcgagaccggcgcca
gttgcacctccaccgacttctcatttcatggttttggcggatacaccgactggaattcag
ccaatgaatccaccgcatatcaatgctgcaaatgcagcgagagaaggagaggttaaggat
gagattaagacggagatcgattccatcaccgagcccggactcaaaactgatcaatatcag
aagcaagcgatggcattgaggacgaaaggagcaaatccgggacgagactggaccgatcag
gagacgtgtctgcttctggaggccttggaaatgttcaaggatgactggaacaaagtttgc
gaccacgttggcacccgtacccaacacgaatgtgtcatgaaattcttgcaacttcctatc
caagatccatacctcgctgacagcgcttccgctggcgacgctggagcaaaagaggttttg
ggaccactcgccttccagccaatcccattctctcaatccggaaatcctgtcatgtctact
gttgcattcttggcttcagtggttgacccacaagtcgctgcggctgccaccaaggctgct
atggaagagctcgccaagttgaaagaagagattcctccgcttgtcgtcgaggcgcatgag
aagaatgtggcggcgatggccgagaagacaggacaaattgatggctccattggcctgacg
aagagtggtttgaagcccgtggatgacggagagggaacaagtacttctggtgctcctgct
ggagatgctgaagagaaaatggatacttcggagaaaccggcagaaggttccattccatca
actgaaaaagccaaatctgacattgataaggaagttcaagctgctgctgcctcttgtcta
gctgccgccgctgtcaaggctaaacatctcgctcaaatcgaggagcgtaggataaagtcg
ttggtggctcaactcgttgagactcagatgaagaagttggagatgaagctccgtcatttt
gatgagctcgagcagataatggataaggagcgcgagtcgttggagtaccagcgtcatcaa
ctgattctagagcgtcaggcgttccatatggatcagctgaaatatttggagaatcgagcg
aaacatgaggctcatacacggttgacgactgcgggaacattaccagctggattgccacct
ggttttgaggtcaccggaccaccacagccaacaccacaagtgcagattagtgctcaggag
gcgggaccggagaagatggataccacggaggcgcgtgctccatccgttcatgctccacca
ccggctccacaacaaatgcttccaccacaacagccaccaccacaacagattccaccacca
gtgcaacagcaacaaccgccacaacaacagattcaacctccacaacaaatgccgccacaa
cagcaaatgccaccacctcagcaacaacagcagcaactcccaccaactccacaacaagtc
ccaccacaacaacaggctccaccaccacaaggatatccaggaggcccaccacaaggttat
ccacaaccaggacaacaacaaggaccaccatcacaacaaggtcaaccaggcggctatcct
ccaccaccacaatcccgttatccacaaggaccaccaccgccacagcagggatacccaggt
tacccaccaccacagggacactatccaggacagccgggacccggacaacagtactatgcg
ccacaaggacagccacaatatcatccgggagcctatccaccgccacaacaacggccaccg
tatcaggcgtctccgtatccaggaccaccacaagcgcgtgctccatatggatacccacca
caacaaggtcaccccggatacccaggaccaccacaacagtacggtggaatgccaccacac
ggtcagtacccaccacagcaaggcggaccaatgggaccaccacatcagccgcatgaggag
ggaggacaaggagatcagaaacaggaataa

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