Caenorhabditis remanei (nematode): GCK72_022029
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Entry
GCK72_022029 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K09326
homeobox protein OTX1
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crq03000
]
GCK72_022029
Transcription factors [BR:
crq03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
GCK72_022029
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
9812977
NCBI-ProteinID:
XP_053583527
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Position
V
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AA seq
499 aa
AA seq
DB search
MSSSSVALINFVVLICDNVAFSTSGYAFFDHFSTSTSKNALLNSLKSPVPSNVFGSGNAD
AFIILPIDATIPIITSFPALYLELLPLFQSSPQLLSLSEYSPRLPCIENSSSESLEDHFL
TTSNLEGTGTSLIQPQNLSGTGPGSGTGAAMNSQNFIQTQSLTGTGTQSSGSASSGNFIS
PDDVETKPSSLMSDDSTLSQITPGGPSISSSAYPASSAVDSASLYFQLSPMPYLPNVSTA
TAAANMSAYFNRSAYPTSHLGLPAQVGHNYLPSSMQFIGGSLSECQSAATMGSMSWNANQ
PSFSRKQRRERTTFTRNQLEILESYFVKTRYPDIFMREDMAHKIQLPESRVQVWFKNRRA
KARQQKKTMSSGSGNVGGCNGFSSNGTSSGGSGGSTGSEVQPSSPATTDNELKFSDSIKE
ECDDQSSSPSSDDQKGGAYIDPISSTTGTTSYNGTASFRPQAQYPYSAYQADYFQYAQAN
PNATTYSLDGNPMWKFQAS
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcatcctccgtagctctcatcaactttgtcgttctcatctgcgacaacgtcgct
ttctcgacctcgggatacgcttttttcgaccacttctctacctccaccagcaagaacgct
ctcttgaactccttgaagtccccagtaccgtcaaacgtttttggctctggcaacgccgac
gccttcatcattctccccatagatgccaccattcccatcataacctcgttccccgcgcta
tacctggaacttctgccactcttccaatcttcaccccaacttctttcactatccgagtat
tctccacgcctgccatgcatcgagaattcgtcatccgaatcccttgaggaccactttctg
accacctccaacctcgagggcaccggaacttccttaatccaaccccagaatctcagtgga
acaggcccaggctctggcacaggagcagcaatgaacagtcagaactttatccaaacccaa
agcttaacagggacaggaacacaatcatccggatcagcatccagtgggaatttcatatca
ccagacgatgtggaaacaaaaccctcatcgttgatgtcggatgactcgacactatcccaa
ataactccgggaggaccatcgatttcgtcatctgcgtatccggcgtcgagtgccgtcgac
tctgcctcattgtattttcagttatcgcctatgccctaccttccgaatgtaagcacagcc
actgcagcagccaatatgagcgcttattttaatcggtctgcttatccaacaagccatttg
ggtctgcctgcccaagtagggcacaattatttgccatcaagtatgcaattcattggagga
agtctgtcggagtgccagtcagctgccaccatggggtccatgtcctggaacgcaaaccaa
cccagtttctccagaaaacaacgacgcgaaagaacaacatttactcgaaatcaacttgaa
attttggagagttatttcgtgaaaactcgctatccagatatttttatgagagaggatatg
gctcataaaatccaactgccggagagccgagtacaagtatggttcaagaatcgaagagcg
aaggctaggcaacaaaagaaaacaatgtcatcgggaagtggaaatgttggtggctgtaat
ggtttcagctcaaacggcacctcttctggtggatccggcggctccacaggaagcgaagtt
caaccatcctccccagcaactacagacaatgagttgaagttctcggattcgatcaaagaa
gaatgtgatgatcaatcgagcagtccatcttcagatgatcaaaaaggaggtgcttatatc
gatccgatttcaagtacaactggaacaacttcctacaatggaacggctagtttcagacca
caggcacaatacccatatagcgcctaccaagccgattatttccagtacgctcaagccaac
cccaatgcgactacatatagcttagacggaaatccgatgtggaaattccaagctagctaa
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