Caenorhabditis remanei (nematode): GCK72_022032
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Entry
GCK72_022032 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K12584
m7GpppX diphosphatase [EC:
3.6.1.59
]
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GCK72_022032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crq03019
]
GCK72_022032
Enzymes [BR:
crq01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.59 5'-(N7-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase
GCK72_022032
Messenger RNA biogenesis [BR:
crq03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
GCK72_022032
3'-5' decay
Other 3'-5' decay factors
GCK72_022032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
DcpS
HIT
Motif
Other DBs
NCBI-GeneID:
9812972
NCBI-ProteinID:
XP_003094356
UniProt:
E3NB60
A0A6A5GLC0
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All DBs
Position
V:complement(22369375..22371342)
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AA seq
311 aa
AA seq
DB search
MKRVAENQLTEQERTEETSQEWLKNAKFQEVLGADSSHKSLFLLLSQSDGSQGILLANKS
PFSEDKTDIEKLLETAKLHEISRNDIFGSYNIEVDGQLNLLKSQLIYPVNERLIAKYRQE
EKFVIRETPELYETVTKPYIEKFQLNLNWVYNCLEKRSEVDKIVFEDPDKNNGFLLMQDI
KWDGKTIENLYVLAIIHRHGLKSVRDLTGDDLPMLHNIRDKSLKAIEEKYGLKNDQVKCY
FHYQPSFYHLHVHFINLKYDAPASTTMSAILLDDVINNLELNSNHYKQSTLTFTRKNGDK
LMEMFREAKGN
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgggtcgcagaaaatcaactgacggagcaggagcgcaccgaagaaaccagccag
gagtggctgaaaaacgcaaagtttcaagaggttctcggagctgattcttctcataaatct
ctcttcctccttctctcccaatcggacggctctcaagggattcttctcgccaacaaatca
ccgttttccgaagacaaaacagatatcgaaaagcttctggaaacagcaaaacttcacgaa
atctctcgaaacgatattttcggatcatataacattgaagttgatggtcaacttaacttg
ctcaaatcccaactaatctaccctgtcaacgagcgtctcatcgccaagtatcgtcaggaa
gagaagtttgtgattcgtgagactccagagctttatgagactgtaaccaagccgtatatc
gagaaattccagttgaatctcaattgggtctacaattgccttgaaaagcgctccgaagtc
gacaaaatcgtgttcgaagaccctgacaagaacaatggatttctgctgatgcaggatatc
aaatgggacggaaaaacgattgaaaacctctatgtccttgcaattattcatcgacacggg
ttgaaatcagtgcgcgatttgactggagatgatttgccgatgctccacaacattcgtgac
aagtcccttaaagcgatcgaagagaagtatggactgaaaaatgaccaagtcaagtgctac
ttccattatcagccgtcgttttatcatttgcatgttcactttatcaacctgaaatatgac
gcgccagcgagcactacaatgtcggcaatccttctggatgacgtcatcaacaatttagag
ttgaattcaaaccactacaaacaatccacgttgactttcactcgcaagaacggggacaag
ctgatggagatgttccgggaggcaaaaggaaattga
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