Caenorhabditis remanei (nematode): GCK72_022184
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Entry
GCK72_022184 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K18585
intermediate filament protein if
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
crq04812
]
GCK72_022184
Cytoskeleton proteins [BR:
crq04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type V: Nuclear lamins
GCK72_022184
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
DMPK_coil
DUF2730
Motif
Other DBs
NCBI-GeneID:
9804610
NCBI-ProteinID:
XP_003106954
UniProt:
E3MA93
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Position
X
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AA seq
1348 aa
AA seq
DB search
MLVSSDSGGKKRENHVIPSNVVKGNECQLKEAPLCTLIVSFTDDEAKDVTSAHVFTMTTP
QLYPQTRKTVYKSGSSSQMSLTSTPFSTDDERYSGYTNSAMSPPLQKQLIQEVSLSYSAP
YTSTVKPSRHDLPLAFSPYSLESEYEKIDDLHSHTYSNDSRLSKHSNSTSKKVDSVERLL
NTGRKETEFPAQSEQVPYFSAQSAIKAGRVTSAHTPRGTPRDTPRDTPVSFDQISTGRLD
SPGSQNLIVSESTTFEELTTITTSNNRTTRKKEIKTEMPTVNALTKQFEISSHQERVVPL
RPRKNSNTAVSVNGNAKSRSRVVVIDKSERNSKYASNRPAVVYSPGGILTTTIVDIEPAR
FGRRTEEYKIEEQYIVKRYDNDSPNNYQGQGQGFQKQQTTEYRAYQTNQKQDNYNDRTRE
KFHRSYSAAENRQNLESPVDTSPIDVVKNVIDRWETKIGGTTTRTNEQQLRSVSRVDMND
NVSRNTQEKIIFRQRSESQPVERVIPISPLPPPTEPIRQTQGVVQTYEEFKTVVVKQSVD
PEPVAPLAYTPEVITSPIETVVSPPPIPTPSPTLDIAEEEIVRTDETVTTQHTITEHSIL
TKETKQEEEKKYVTDSKKVAVEIAETKVVTEAEEKGKQKPLTPTPTPVPQYSESKEEEKI
ETVEKTETKKDEEYLHHFLDRDYRIKTYEEWSTTRRLRDRSQPPERPPTSYSSYSDRSKS
IDRTYERRVLGSGMSRTYSEGRGLASGAAYTSGFGGLVSGMSSAGAICTTQIRDAREREK
REIGLLNDRLADYIEKVRFLEAQNQCLSHDIDILRRGFSGGGHVSGLYDTEIAQAKRILE
QIIAGRTVFDRDITALSADIDGFRKKWIDAVNAVKAHREDHDVDLDRLSKIEAEISLYKR
KIRIVEEDVIRIRRENDGIYNEIARIKQLTHNEIALKNERSLNVQDLLQRIKLCQTENST
KIEQELVFIRRDTTAENRDYFRHELQAAIRDIRADYEAISIRNRNDIEVWYREQIRKIQS
ESTRVNPDLYKEELVSIRSTVTSVKSRLAEVEGRNFFLEKLIEDLRNNEESKMFEISLAE
KDAQIARLREQCTELSIQMERLCDNEISLRAEIERYRVLLNGANVTTYVSNTHPATSQIH
VGGNVGSTRVISQTTRTHSSSNTSYTGVPTSRSGAGYTVGGNIGGISVGGTIGTHGASGH
VSGGAAGSETRSSVASLISEKRPDRVHDEKGVDASGRNFHSWYLGTISINQVTPSYIELK
NICKIRRVDVGGFRVEQSVNGHLLGSAQINVPLILDPQEVVRFNHRHGKYLGQFFMDVDA
FDNSVNARTSMFNYSEPDEERAWFVYLD
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtctcttcggattctggaggcaagaagcgagagaatcatgtcatcccttctaat
gttgtgaaggggaacgaatgtcaactgaaagaagcacctctatgtacactaattgtgtca
ttcacggacgatgaggcaaaagatgtcacgtctgcacatgtattcaccatgactactcca
caactctaccctcaaacaagaaaaactgtctacaaaagtgggtcctcatcacaaatgtcg
ttaacatcgacgccatttagtaccgacgatgagcgttacagtgggtataccaattctgcg
atgtccccaccactccaaaaacaattaatccaagaagtttctctatcctattccgctcca
tacacctccacagttaaaccatcaagacatgatttaccgcttgctttctccccatattca
cttgagtcagagtacgaaaaaattgacgatctacattcccacacttatagcaacgattct
cgattgtctaagcattcaaattctacttccaaaaaagttgactccgtcgagcgactattg
aataccggccggaaggagactgagttcccagctcaatctgagcaagtcccttatttctct
gcccaatcagctatcaaagctggtagagtcacttctgctcatactccgagaggaactcca
agagacactcctagagatactcctgtatcttttgaccaaatttctaccggacgcttggat
agcccaggctcccaaaatttgatagtttcagagagcactacttttgaggaactgaccacg
attactacttccaataaccgcactacacgaaagaaggaaatcaagacagaaatgccgaca
gtcaacgccttaaccaaacagtttgagatttcgtctcatcaagaaagagtggttcctttg
agaccaagaaaaaattcgaatactgcagtttcggttaatgggaacgccaaatccagatct
agagtcgtggttattgataagtctgaaagaaactcaaagtatgcctcaaaccgaccagct
gttgtttactcccctggcggcatattaacgaccacaattgttgacattgaaccggcacgc
tttggacgacgaaccgaagaatataaaatagaggaacaatacattgtcaaaagatatgat
aatgactcgccgaacaactatcaaggacaaggtcaagggttccaaaaacaacaaaccaca
gagtacagagcttatcaaaccaaccaaaaacaagacaactataatgataggactcgtgag
aaatttcatagaagttacagtgctgctgaaaaccgacagaatctcgaatctccggtagat
acatctcccattgatgtagtcaaaaatgtgattgatcgctgggaaaccaagattggaggt
actacaactcgtaccaatgagcagcaactccgttcagtatcacgtgtggatatgaatgat
aatgtctccagaaacactcaagagaaaataatattccgccaaagaagcgagtctcaacct
gttgaacgagtcatcccaatttctccacttccacctccaaccgagccaatccgacaaact
caaggagtagtacaaacctatgaagagttcaaaacagttgtcgtcaaacaatccgttgac
ccagaacctgtcgcaccactcgcttacaccccagaagtaattacctctccaattgaaaca
gttgtctctccaccaccaatccccacaccatctccaactcttgatattgccgaagaggaa
attgtgagaactgacgaaaccgtgacaactcagcatacaatcactgaacattccattctg
actaaagagaccaaacaggaggaggaaaagaaatacgtcactgatagcaaaaaagttgcg
gtggaaattgcggagacaaaggttgtgacagaggcggaggaaaaggggaaacagaaaccg
ttgacaccaacgccaactcctgtgccacagtattcggaatcgaaggaggaggagaagatt
gaaactgtagagaaaactgaaacgaagaaagatgaagagtatcttcaccactttttggat
agagactatcgaatcaagacatatgaagagtggtctaccacgagacgactcagagataga
tctcagccaccagagagaccaccaacttcttattcatcatattcggatcgttccaagtct
attgatagaacttatgagagacgtgttttgggaagcggaatgtctagaacatactcagaa
ggtcgtgggcttgctagtggagcagcttacacatccggatttggtggattggtcagtgga
atgtcatcagctggagcaatttgcaccactcaaattcgtgatgctcgtgagcgtgagaag
agagaaatcggactcttgaacgatcgtcttgccgattatattgagaaggtccgattcctt
gaagctcaaaaccaatgcctcagccacgacatcgacattctccgccgtggattcagtgga
ggtggtcatgtgtctggactctacgacactgaaattgcccaagccaagcgaattctcgag
caaataattgccggccgtaccgtttttgacagagacatcactgctctttctgctgatatt
gatgggttccgcaagaagtggattgacgccgtcaacgcagtcaaggctcaccgtgaggac
cacgacgtcgacctcgacagactctccaagattgaggctgaaatctctctctacaagaga
aagatccgtattgttgaggaggatgtcatcagaatccgcagagaaaacgacggtatctac
aatgaaattgccagaatcaagcagctgactcacaacgaaatcgctttgaagaacgagcgc
agtttgaatgtccaagaccttctccaacgcatcaagctctgccaaactgaaaacagcacc
aagatcgagcaagaacttgtcttcatccgccgtgacaccaccgccgagaatcgtgactac
ttcagacatgaactccaggcagctatccgtgacatccgtgccgattatgaagctatcagc
atccgcaaccgcaacgacatcgaagtctggtaccgcgagcaaatcagaaagatccagagc
gagtccacccgtgtcaacccagacctttacaaggaggagttggtgtctatccgctcaacg
gtgacaagtgtgaagagcagactcgctgaagttgaaggaagaaacttcttccttgaaaaa
ctcattgaagaccttagaaacaacgaggaatccaagatgttcgagatcagtctggctgaa
aaagacgcccagattgccagacttcgtgagcaatgcacagagctcagcatccaaatggag
agactctgcgacaacgaaatttccctccgtgccgaaatcgagagataccgcgttctcctg
aatggtgccaatgtgaccacctatgtgtccaacacccaccccgccacctcccaaatccat
gtcggaggaaacgttggaagcacccgagtgatctcccaaaccacccgaacccacagcagt
agcaataccagctacaccggagttcccacttctagaagtggcgctggttacactgttgga
ggaaacattggaggaatctctgttggtggaacaatcggaacccatggagcatctggacat
gtatccggaggtgccgcaggaagcgaaaccagatcatcagtagcgtctctcatctccgaa
aaacgtccagacagagtgcacgatgaaaaaggagtcgacgcgtctggaagaaacttccac
agctggtacttgggaactatttctatcaaccaagtaactccaagttacatcgagttgaag
aacatttgcaagatcagacgcgttgatgtaggcggtttcagagttgagcaatctgtcaac
ggccacttactcggaagtgcacaaatcaacgttcctcttattcttgatccacaagaagtc
gtgaggttcaaccacagacacggaaaatatcttggtcaattcttcatggacgttgatgca
tttgacaactctgtcaatgccagaacttcaatgttcaattattcagagcctgatgaggag
cgtgcctggtttgtgtacctcgactag
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