KEGG   Caenorhabditis remanei (nematode): GCK72_022184
Entry
GCK72_022184      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K18585  intermediate filament protein if
Organism
crq  Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:crq00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:crq04812]
    GCK72_022184
Cytoskeleton proteins [BR:crq04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type V: Nuclear lamins
     GCK72_022184
SSDB
Motif
Pfam: Filament DMPK_coil DUF2730
Other DBs
NCBI-GeneID: 9804610
NCBI-ProteinID: XP_003106954
UniProt: E3MA93
LinkDB
Position
X
AA seq 1348 aa
MLVSSDSGGKKRENHVIPSNVVKGNECQLKEAPLCTLIVSFTDDEAKDVTSAHVFTMTTP
QLYPQTRKTVYKSGSSSQMSLTSTPFSTDDERYSGYTNSAMSPPLQKQLIQEVSLSYSAP
YTSTVKPSRHDLPLAFSPYSLESEYEKIDDLHSHTYSNDSRLSKHSNSTSKKVDSVERLL
NTGRKETEFPAQSEQVPYFSAQSAIKAGRVTSAHTPRGTPRDTPRDTPVSFDQISTGRLD
SPGSQNLIVSESTTFEELTTITTSNNRTTRKKEIKTEMPTVNALTKQFEISSHQERVVPL
RPRKNSNTAVSVNGNAKSRSRVVVIDKSERNSKYASNRPAVVYSPGGILTTTIVDIEPAR
FGRRTEEYKIEEQYIVKRYDNDSPNNYQGQGQGFQKQQTTEYRAYQTNQKQDNYNDRTRE
KFHRSYSAAENRQNLESPVDTSPIDVVKNVIDRWETKIGGTTTRTNEQQLRSVSRVDMND
NVSRNTQEKIIFRQRSESQPVERVIPISPLPPPTEPIRQTQGVVQTYEEFKTVVVKQSVD
PEPVAPLAYTPEVITSPIETVVSPPPIPTPSPTLDIAEEEIVRTDETVTTQHTITEHSIL
TKETKQEEEKKYVTDSKKVAVEIAETKVVTEAEEKGKQKPLTPTPTPVPQYSESKEEEKI
ETVEKTETKKDEEYLHHFLDRDYRIKTYEEWSTTRRLRDRSQPPERPPTSYSSYSDRSKS
IDRTYERRVLGSGMSRTYSEGRGLASGAAYTSGFGGLVSGMSSAGAICTTQIRDAREREK
REIGLLNDRLADYIEKVRFLEAQNQCLSHDIDILRRGFSGGGHVSGLYDTEIAQAKRILE
QIIAGRTVFDRDITALSADIDGFRKKWIDAVNAVKAHREDHDVDLDRLSKIEAEISLYKR
KIRIVEEDVIRIRRENDGIYNEIARIKQLTHNEIALKNERSLNVQDLLQRIKLCQTENST
KIEQELVFIRRDTTAENRDYFRHELQAAIRDIRADYEAISIRNRNDIEVWYREQIRKIQS
ESTRVNPDLYKEELVSIRSTVTSVKSRLAEVEGRNFFLEKLIEDLRNNEESKMFEISLAE
KDAQIARLREQCTELSIQMERLCDNEISLRAEIERYRVLLNGANVTTYVSNTHPATSQIH
VGGNVGSTRVISQTTRTHSSSNTSYTGVPTSRSGAGYTVGGNIGGISVGGTIGTHGASGH
VSGGAAGSETRSSVASLISEKRPDRVHDEKGVDASGRNFHSWYLGTISINQVTPSYIELK
NICKIRRVDVGGFRVEQSVNGHLLGSAQINVPLILDPQEVVRFNHRHGKYLGQFFMDVDA
FDNSVNARTSMFNYSEPDEERAWFVYLD
NT seq 4047 nt   +upstreamnt  +downstreamnt
atgctcgtctcttcggattctggaggcaagaagcgagagaatcatgtcatcccttctaat
gttgtgaaggggaacgaatgtcaactgaaagaagcacctctatgtacactaattgtgtca
ttcacggacgatgaggcaaaagatgtcacgtctgcacatgtattcaccatgactactcca
caactctaccctcaaacaagaaaaactgtctacaaaagtgggtcctcatcacaaatgtcg
ttaacatcgacgccatttagtaccgacgatgagcgttacagtgggtataccaattctgcg
atgtccccaccactccaaaaacaattaatccaagaagtttctctatcctattccgctcca
tacacctccacagttaaaccatcaagacatgatttaccgcttgctttctccccatattca
cttgagtcagagtacgaaaaaattgacgatctacattcccacacttatagcaacgattct
cgattgtctaagcattcaaattctacttccaaaaaagttgactccgtcgagcgactattg
aataccggccggaaggagactgagttcccagctcaatctgagcaagtcccttatttctct
gcccaatcagctatcaaagctggtagagtcacttctgctcatactccgagaggaactcca
agagacactcctagagatactcctgtatcttttgaccaaatttctaccggacgcttggat
agcccaggctcccaaaatttgatagtttcagagagcactacttttgaggaactgaccacg
attactacttccaataaccgcactacacgaaagaaggaaatcaagacagaaatgccgaca
gtcaacgccttaaccaaacagtttgagatttcgtctcatcaagaaagagtggttcctttg
agaccaagaaaaaattcgaatactgcagtttcggttaatgggaacgccaaatccagatct
agagtcgtggttattgataagtctgaaagaaactcaaagtatgcctcaaaccgaccagct
gttgtttactcccctggcggcatattaacgaccacaattgttgacattgaaccggcacgc
tttggacgacgaaccgaagaatataaaatagaggaacaatacattgtcaaaagatatgat
aatgactcgccgaacaactatcaaggacaaggtcaagggttccaaaaacaacaaaccaca
gagtacagagcttatcaaaccaaccaaaaacaagacaactataatgataggactcgtgag
aaatttcatagaagttacagtgctgctgaaaaccgacagaatctcgaatctccggtagat
acatctcccattgatgtagtcaaaaatgtgattgatcgctgggaaaccaagattggaggt
actacaactcgtaccaatgagcagcaactccgttcagtatcacgtgtggatatgaatgat
aatgtctccagaaacactcaagagaaaataatattccgccaaagaagcgagtctcaacct
gttgaacgagtcatcccaatttctccacttccacctccaaccgagccaatccgacaaact
caaggagtagtacaaacctatgaagagttcaaaacagttgtcgtcaaacaatccgttgac
ccagaacctgtcgcaccactcgcttacaccccagaagtaattacctctccaattgaaaca
gttgtctctccaccaccaatccccacaccatctccaactcttgatattgccgaagaggaa
attgtgagaactgacgaaaccgtgacaactcagcatacaatcactgaacattccattctg
actaaagagaccaaacaggaggaggaaaagaaatacgtcactgatagcaaaaaagttgcg
gtggaaattgcggagacaaaggttgtgacagaggcggaggaaaaggggaaacagaaaccg
ttgacaccaacgccaactcctgtgccacagtattcggaatcgaaggaggaggagaagatt
gaaactgtagagaaaactgaaacgaagaaagatgaagagtatcttcaccactttttggat
agagactatcgaatcaagacatatgaagagtggtctaccacgagacgactcagagataga
tctcagccaccagagagaccaccaacttcttattcatcatattcggatcgttccaagtct
attgatagaacttatgagagacgtgttttgggaagcggaatgtctagaacatactcagaa
ggtcgtgggcttgctagtggagcagcttacacatccggatttggtggattggtcagtgga
atgtcatcagctggagcaatttgcaccactcaaattcgtgatgctcgtgagcgtgagaag
agagaaatcggactcttgaacgatcgtcttgccgattatattgagaaggtccgattcctt
gaagctcaaaaccaatgcctcagccacgacatcgacattctccgccgtggattcagtgga
ggtggtcatgtgtctggactctacgacactgaaattgcccaagccaagcgaattctcgag
caaataattgccggccgtaccgtttttgacagagacatcactgctctttctgctgatatt
gatgggttccgcaagaagtggattgacgccgtcaacgcagtcaaggctcaccgtgaggac
cacgacgtcgacctcgacagactctccaagattgaggctgaaatctctctctacaagaga
aagatccgtattgttgaggaggatgtcatcagaatccgcagagaaaacgacggtatctac
aatgaaattgccagaatcaagcagctgactcacaacgaaatcgctttgaagaacgagcgc
agtttgaatgtccaagaccttctccaacgcatcaagctctgccaaactgaaaacagcacc
aagatcgagcaagaacttgtcttcatccgccgtgacaccaccgccgagaatcgtgactac
ttcagacatgaactccaggcagctatccgtgacatccgtgccgattatgaagctatcagc
atccgcaaccgcaacgacatcgaagtctggtaccgcgagcaaatcagaaagatccagagc
gagtccacccgtgtcaacccagacctttacaaggaggagttggtgtctatccgctcaacg
gtgacaagtgtgaagagcagactcgctgaagttgaaggaagaaacttcttccttgaaaaa
ctcattgaagaccttagaaacaacgaggaatccaagatgttcgagatcagtctggctgaa
aaagacgcccagattgccagacttcgtgagcaatgcacagagctcagcatccaaatggag
agactctgcgacaacgaaatttccctccgtgccgaaatcgagagataccgcgttctcctg
aatggtgccaatgtgaccacctatgtgtccaacacccaccccgccacctcccaaatccat
gtcggaggaaacgttggaagcacccgagtgatctcccaaaccacccgaacccacagcagt
agcaataccagctacaccggagttcccacttctagaagtggcgctggttacactgttgga
ggaaacattggaggaatctctgttggtggaacaatcggaacccatggagcatctggacat
gtatccggaggtgccgcaggaagcgaaaccagatcatcagtagcgtctctcatctccgaa
aaacgtccagacagagtgcacgatgaaaaaggagtcgacgcgtctggaagaaacttccac
agctggtacttgggaactatttctatcaaccaagtaactccaagttacatcgagttgaag
aacatttgcaagatcagacgcgttgatgtaggcggtttcagagttgagcaatctgtcaac
ggccacttactcggaagtgcacaaatcaacgttcctcttattcttgatccacaagaagtc
gtgaggttcaaccacagacacggaaaatatcttggtcaattcttcatggacgttgatgca
tttgacaactctgtcaatgccagaacttcaatgttcaattattcagagcctgatgaggag
cgtgcctggtttgtgtacctcgactag

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