Caenorhabditis remanei (nematode): GCK72_022910
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Entry
GCK72_022910 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K17908
autophagy-related protein 18
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq04136
Autophagy - other
crq04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
GCK72_022910
04136 Autophagy - other
GCK72_022910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crq04131
]
GCK72_022910
03029 Mitochondrial biogenesis [BR:
crq03029
]
GCK72_022910
Membrane trafficking [BR:
crq04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
GCK72_022910
Mitochondrial biogenesis [BR:
crq03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
GCK72_022910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_Vps41
Beta-prop_RSE1_2nd
Beta-prop_HPS5
EIF3I
ANAPC4_WD40
BCAS3_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_NUP159_NUP214
WDR55
Beta-prop_WDR90_POC16_2nd
DUF5711
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
9798443
NCBI-ProteinID:
XP_053578691
UniProt:
A0A6A5FV94
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All DBs
Position
X:4743078..4745138
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AA seq
366 aa
AA seq
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MIAVGHKEGYMFYKTSDVLEKSRLSCGIQNLNNLGLQNCTIIERLFSSSLMIVVSQKNLR
VLNVATNNIICDHQFNKPVITVRLNKQRVIVCLEDSIHIYNINDMKMMHSIVDTPLNKLG
VVDLTSNSGDAYIAFPGNTKTGSVHLFDAINLVSVNTFVAHEGALACLQFNQKGDMIATA
STKGTVIRVYSVPDGHLLFEFRRGVSRCVTIYSLCFSSDSKYLASSSNTETVHVFKLEKT
EDVSKPEVPNDMMETAAGWLSAFNKTVSAYLPYQFMQVSELMTTERSFATAKLPCVTESN
RVALVSHKSHQYLMVATNDGYVYAYQMNPEGGELDLVKQHHIGPESESLHSSPLGNVTNT
RSHNDF
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgattgcagttggccacaaagaaggatacatgttctacaaaacatccgatgttctcgaa
aaatcaaggctcagttgtggaatccaaaaccttaataacttgggcctccagaattgtaca
attatcgagcgactcttctcttcatccctgatgattgtggtctcgcagaaaaatcttcga
gttttgaatgtcgctaccaacaatatcatttgcgatcatcagttcaacaaaccagttatc
actgtcagactcaataaacagagagtcatagtatgcttggaggattccatccatatatac
aatatcaatgacatgaaaatgatgcactctattgtggacactccactgaacaagttggga
gtagtggatctcaccagtaactcaggggatgcctacattgctttcccaggaaacactaaa
actggatccgttcatcttttcgatgcgatcaatctggtttcagtgaacacatttgttgcc
catgaaggagctctggcatgtctgcaattcaatcaaaaaggagatatgattgccacagcg
agcacaaaaggaactgtcattcgcgtttattctgttccagacggacatcttctctttgag
ttccgtcgtggagtttctcgttgtgtcactatctattcgctctgcttttcatcagattca
aaatatctcgcatcttcttcaaacactgaaacggttcacgttttcaaactggagaaaact
gaagatgtttctaaacccgaagttcccaacgatatgatggaaactgctgctggatggctc
agcgcgtttaataaaactgtctctgcctacctgccgtatcaatttatgcaagtctcggag
ctaatgacgacggagcgtagttttgctactgcaaaactaccatgtgtcaccgaaagcaac
cgagtcgctcttgtttcccacaaaagtcatcaatacctgatggttgctacaaatgatgga
tatgtatatgcctaccaaatgaatccagaaggcggtgaactcgatctcgtcaaacaacat
cacatcggaccagaaagcgagtcactccatagcagtccgctcggaaatgtaaccaacaca
cgcagtcacaatgacttttaa
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