KEGG   Caenorhabditis remanei (nematode): GCK72_022910
Entry
GCK72_022910      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K17908  autophagy-related protein 18
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq04136  Autophagy - other
crq04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:crq00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    GCK72_022910
   04136 Autophagy - other
    GCK72_022910
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:crq04131]
    GCK72_022910
   03029 Mitochondrial biogenesis [BR:crq03029]
    GCK72_022910
Membrane trafficking [BR:crq04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    GCK72_022910
Mitochondrial biogenesis [BR:crq03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    GCK72_022910
SSDB
Motif
Pfam: PROPPIN Beta-prop_THOC3 Beta-prop_EML_2 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_WDR5 WD40_Prp19 Beta-prop_IFT122_1st WD40_CDC20-Fz BCAS3_WD40 WD40 Beta-prop_Vps41 Beta-prop_HPS5 EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_EML WDR55 Beta-prop_RSE1_2nd Beta-prop_NUP159_NUP214 Beta-prop_WDR90_POC16_2nd WD40_Gbeta Beta-prop_VPS8 DUF5711 Beta-prop_TEP1_2nd TP_0783 Beta-prop_IFT140_1st
Other DBs
NCBI-GeneID: 9798443
NCBI-ProteinID: XP_053578691
LinkDB
Position
X:<4743078..>4745138
AA seq 366 aa
MIAVGHKEGYMFYKTSDVLEKSRLSCGIQNLNNLGLQNCTIIERLFSSSLMIVVSQKNLR
VLNVATNNIICDHQFNKPVITVRLNKQRVIVCLEDSIHIYNINDMKMMHSIVDTPLNKLG
VVDLTSNSGDAYIAFPGNTKTGSVHLFDAINLVSVNTFVAHEGALACLQFNQKGDMIATA
STKGTVIRVYSVPDGHLLFEFRRGVSRCVTIYSLCFSSDSKYLASSSNTETVHVFKLEKT
EDVSKPEVPNDMMETAAGWLSAFNKTVSAYLPYQFMQVSELMTTERSFATAKLPCVTESN
RVALVSHKSHQYLMVATNDGYVYAYQMNPEGGELDLVKQHHIGPESESLHSSPLGNVTNT
RSHNDF
NT seq 1101 nt   +upstreamnt  +downstreamnt
atgattgcagttggccacaaagaaggatacatgttctacaaaacatccgatgttctcgaa
aaatcaaggctcagttgtggaatccaaaaccttaataacttgggcctccagaattgtaca
attatcgagcgactcttctcttcatccctgatgattgtggtctcgcagaaaaatcttcga
gttttgaatgtcgctaccaacaatatcatttgcgatcatcagttcaacaaaccagttatc
actgtcagactcaataaacagagagtcatagtatgcttggaggattccatccatatatac
aatatcaatgacatgaaaatgatgcactctattgtggacactccactgaacaagttggga
gtagtggatctcaccagtaactcaggggatgcctacattgctttcccaggaaacactaaa
actggatccgttcatcttttcgatgcgatcaatctggtttcagtgaacacatttgttgcc
catgaaggagctctggcatgtctgcaattcaatcaaaaaggagatatgattgccacagcg
agcacaaaaggaactgtcattcgcgtttattctgttccagacggacatcttctctttgag
ttccgtcgtggagtttctcgttgtgtcactatctattcgctctgcttttcatcagattca
aaatatctcgcatcttcttcaaacactgaaacggttcacgttttcaaactggagaaaact
gaagatgtttctaaacccgaagttcccaacgatatgatggaaactgctgctggatggctc
agcgcgtttaataaaactgtctctgcctacctgccgtatcaatttatgcaagtctcggag
ctaatgacgacggagcgtagttttgctactgcaaaactaccatgtgtcaccgaaagcaac
cgagtcgctcttgtttcccacaaaagtcatcaatacctgatggttgctacaaatgatgga
tatgtatatgcctaccaaatgaatccagaaggcggtgaactcgatctcgtcaaacaacat
cacatcggaccagaaagcgagtcactccatagcagtccgctcggaaatgtaaccaacaca
cgcagtcacaatgacttttaa

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