Caenorhabditis remanei (nematode): GCK72_023220
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Entry
GCK72_023220 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K03440
acid-sensing ion channel, other
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
crq04040
]
GCK72_023220
Ion channels [BR:
crq04040
]
Ligand-gated channels
Acid-sensing ion channel (ASIC)
GCK72_023220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASC
Mec-4_10_cyt
Motif
Other DBs
NCBI-GeneID:
9809209
NCBI-ProteinID:
XP_003106643
UniProt:
E3MAP0
A0A2P4WNV3
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Position
X:complement(6433104..6436121)
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AA seq
768 aa
AA seq
DB search
MSWMQNLKNYQHLRDPSEYMSQVYGDPLAYLQESTKFVTEREYYEDYGYGECFNSSESEV
QCELITGEFDPKLLPYDKRLAWHFKEFCYKTSAHGIPMIGEAPNVYYRAVWVMLFLGCMI
MLYLNAQSVLDKYNRNEKIVDIQLKFDTAPFPAITLCNLNPYKASLATSVDLVKRTLSAF
DGAMGKAGGNKEHEEDKEVVTEPPTTPAPTTKPSRRRGKRDLSGAFFEPGFARCLCGSQG
SSEMEEKDDEKEEEMRETTTRKSFDINEADEEWDGVEEYDNEHYENYDVETTTGMNMMEE
CQSERTKFDEPTGFDDRCICAFDRSTHDAWPCFLNGTWETTECDTCNEHAFCTKDNKTAK
GHRSPCICAPSRFCVAYNGKTPPIEIWTYLQGGTPTEDPNFLEAMGFQGMTDEVAIVTKA
KENIMFAMATLSMQDRERLSTTKRELVHKCSFNGKACDIEADFLTHIDPVFGSCFTFNHN
RTVNLTSIRAGPMYGLRMLVYVNASDYMPTTEATGVRLTIHDKEDFPFPDTFGYSAPTGY
VSSFGLRLRKMSRLPAPYGDCVPDGKTSDYIYSNYEYSVEGCYRSCFQQLVLKECRCGDP
RFPVPENARHCDAADPVARKCLDARMNDLGGLHGSFRCRCQQPCRQSIYSVTYSPAKWPS
LSLQIQLGSCNGTAVECNKHYKENGAMVEVFYEQLNFEMLTESEAYGFVNLLADFGGQLG
LWCGISFLTCCEFVFLFFETAYMSAEHNYSLYKKKKAEKAKKVASGSF
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgtcatggatgcaaaacttgaaaaattatcaacatctacgggatccatccgagtacatg
tcccaagtttacggagacccattggcttatcttcaagaaagcacaaagtttgtgacggag
cgagaatattatgaagactatggctatggagagtgtttcaattcttcggaatctgaagtg
caatgcgaactgatcactggcgagtttgatcccaagttactgccttatgacaaacggctt
gcgtggcatttcaaagagttttgctacaaaacttctgctcatggaattccaatgatagga
gaagcacctaatgtgtattatagagcagtttgggttatgttattccttggatgtatgatt
atgctgtatctcaatgctcaatccgttcttgacaagtacaaccgaaatgagaagattgta
gatattcagctaaaatttgacactgcaccgtttcctgccatcacgctttgtaatttgaac
ccatacaaggcaagtctggccaccagtgtcgatttagtcaagcgaacgttatctgcattc
gacggtgctatgggtaaagccggaggaaacaaggaacacgaagaagataaggaagttgtc
actgagccaccaaccactccagcgccaacaacaaagccatctcgtcgtcgtggaaaacga
gatctgtctggtgcattctttgagccaggatttgcgagatgtctgtgcggaagtcaaggt
tccagtgaaatggaggagaaagatgatgaaaaagaagaggagatgcgcgaaacgaccacc
agaaagtcatttgatattaatgaagccgatgaggagtgggatggagtggaggagtatgac
aatgagcactatgagaattatgacgttgaaacgacaactggaatgaatatgatggaagaa
tgtcaatctgaaagaactaaatttgatgagcctactggatttgatgatcggtgcatttgc
gcgttcgacagatcgactcatgatgcatggccatgttttttgaacggtacctgggaaact
actgaatgtgatacttgcaatgaacatgcattctgtaccaaggataacaaaactgcaaaa
gggcacagatctccatgtatatgtgcgccatcgcggttctgtgtagcttataacgggaag
acaccaccaattgagatttggacgtatttgcaaggaggaactccaactgaggacccaaat
ttcttggaggctatgggtttccagggtatgactgatgaagtagctattgtcacaaaagca
aaagaaaacatcatgtttgctatggcgactctctcaatgcaagacagagaacgactgagc
accacaaaacgagagctagtacataagtgttcgtttaatggaaaggcttgtgacattgaa
gcagatttcttaactcatatcgacccagtatttggctcttgcttcacattcaatcataat
cgaacagttaatctaactagcatccgtgcaggtcctatgtacggcttgcgtatgctggta
tatgttaacgcttctgactacatgcccaccacagaagcaacaggagtcagattaacaatt
catgacaaagaggatttcccatttcccgacacgttcggatactctgctccaactggttat
gtatcgtcatttggtttgagattgaggaaaatgtcccgtttaccagcaccatatggtgat
tgtgtcccagatggtaaaacttcggactatatctacagtaactatgaatattccgtagag
ggatgctaccgttcttgtttccaacagttagtgctgaaagagtgcagatgtggagacccc
cgtttcccagtacctgaaaatgcaagacattgtgatgcagcggatccagttgcaagaaaa
tgtttggatgcgagaatgaacgatttgggaggtctacatggttctttccgatgcagatgt
cagcaaccttgtcgacagtctatatactccgttacgtattcacctgcaaagtggccgtca
ttgtcgttgcagattcagctagggtcatgtaatggaacagcagtagagtgtaacaagcat
tataaagaaaatggtgctatggtggaagttttctatgagcagttaaacttcgaaatgctt
acagagtcagaggcctatggattcgtaaacctgctggccgattttggtggtcaactcggt
ttgtggtgtggaatatccttcttgacttgctgtgaattcgtcttcctgttcttcgagact
gcatacatgagtgcagagcataattattccctgtataaaaagaaaaaagcggaaaaagcc
aaaaaagttgcttctggatctttctag
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