Caenorhabditis remanei (nematode): GCK72_023266
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Entry
GCK72_023266 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K05730
guanine nucleotide exchange factor VAV
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
GCK72_023266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_2
SH2
CH
SH3_1
SOS1_NGEF_PH
SH3_9
CAMSAP_CH
C1_1
PH
C1_2
PH_10
ECT2_PH
CDC24
PH_19
DH_Alsin
RHG20_PH
IQ_SEC7_PH
PHD_2
DUF3104
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
9809362
NCBI-ProteinID:
XP_053578880
UniProt:
A0A6A5FW02
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Position
X:complement(6631090..6635635)
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AA seq
974 aa
AA seq
DB search
MSSGSELWIGCARWLRDLNVLTTDKNGTIVEFASILRDGILLCRLANTLVPNAINQNDII
KAQQQTQFTCTRNIRLFVNFCKSHFKMQDSDLFNPEKLYHMDGFQQILKTLSILSHTDES
IRRGVNPFPETTTSQESSSCSPCLDFNDDEDIYQSLPKDIDSVNPDETIYGPITSAEEKQ
NEQVYDRIVTNRKPSMNENDLKTSSSNIKDLRVKELYDTEVNYVRSALGQLIDIFYKPLK
EIISTEQFKTVFANIEPIHKFHVSLLADLEYPVNFTWGISEEKVPRPTTLNGIEAPRTIG
EVFVKYRDQFLIYGKYCSNLLDSREMINSLLNTNEKFAKLVNESAQQAGCKFSLNDLLCV
PFQRITKYPLLLKELLKKCDMSSPDRKSLAEAVEVMEDVCNYINEESRDTTSKKMIDEIE
KSIVDLAMPENVKLHDYGRVNFDGEVKMSESTATTYGKAKQRYVFLFDKVIVVCKTMTKM
PVKEKSPSGSNLKSNTFTYKNAYIMSELNIDQNVSIDTKSGGTITRRTQYVIHMHRDRNE
GSEITQISFYFKNEATRSAWMTALLLSKSNVSPTEYLRDTNHKVSFHSLRVDLEKPYTCG
VCEKLMKGLRYQGYKCESCEMIMHKDCLGLKKCEAIRRSTHEHRSSHSFNISRPRLTVRE
GDVVTASSTVIPQDLSYLQFTKGDTIEVIKMQSHNRFTGCVSNNRNRTGLVHLDHISKPR
TTSMIGLSPMESPAGSIVRIGRHESTVLPNKPLSDPSARSSDPQLSRTSRTSSTSTVNGN
NENGRPQEYVNTEIAGFRWYMGEMERTKAESTLRGTPNGTFLVRYSKNRKQTAISLSYKN
DVKHMIIEKNQDGKMYLDEDYIFNSTVELVQYYRDHNLIEIFQALDTCLKVPYSACKVYK
AVHDYDPPSPNSDGKFLSFKTGDTVVLLDTVGEDRGWWKGQVNNKTGFFPLSYVKALESI
SDDNGPSTPTSSSS
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgagctcggggagcgagctctggattgggtgcgcccgatggttacgtgatctgaacgtg
ctcacaacggataaaaatggaaccattgttgaattcgcttcaattttgagagatggtatt
cttctctgccgccttgcaaatacgttggtaccaaatgccatcaaccaaaatgatattatc
aaggcacaacagcaaactcagtttacatgtactcgtaacatccgattgtttgtcaacttt
tgcaaatcacacttcaaaatgcaagactcggatctgttcaacccggaaaagttgtatcac
atggacggatttcagcaaattctcaaaacgctgtcaatcttatcacatactgatgagtcg
atccgacgtggagtaaacccattccccgagacaactacaagtcaggagagttcatcatgt
tccccttgcttggatttcaacgacgatgaggatatttatcaatcgcttccaaaagacatt
gattccgtcaatccggatgagacaatctacggccctatcacaagcgcggaagaaaagcag
aatgagcaggtctatgaccgaatcgtgacaaatcggaaacccagtatgaatgaaaacgat
ctcaaaacgtccagcagcaacattaaagacctccgcgtcaaagagttgtatgatacggaa
gttaactacgtgagatcagcgcttggacagctcatcgatattttctacaagcctctgaag
gagattatctctactgaacagttcaaaaccgtctttgcaaacattgaacctattcataaa
tttcatgtgtctttgctcgcggatttggaatatccagtaaactttacttggggtatttct
gaagagaaagttccaagaccgacgacattgaatggaattgaagctccgaggactattggg
gaagtgtttgtaaagtatcgcgatcaatttctcatttacggaaaatactgcagtaacctg
ctggacagtcgagagatgataaatagcttgctgaacacaaacgaaaaatttgcgaagtta
gttaatgaatcggcacaacaagcaggatgtaaattcagcctcaatgatctcctctgtgtc
ccattccaacgaatcacaaagtatccattgcttctgaaggaattgctgaaaaaatgtgat
atgagcagtccagatagaaaatcgttagctgaagcggttgaagtgatggaagacgtttgt
aactatattaatgaagaatcccgtgatacgacttctaagaagatgattgatgagattgag
aagagcattgttgatttggcgatgccagaaaatgtgaaacttcatgattatggacgtgtt
aattttgacggtgaagttaaaatgtctgaatcaacagcaaccacatatgggaaggcgaaa
caacgatacgttttccttttcgataaagtgattgtggtttgcaaaacaatgaccaagatg
ccggtgaaagaaaaaagtccctcaggatcaaacctcaaatcaaatacttttacttacaaa
aacgcctatataatgtcggagctcaatatcgatcaaaacgtttctatcgacacaaaatct
ggaggaacaatcacgcgaagaactcaatatgttattcatatgcatcgagataggaatgaa
gggagtgaaatcactcagatttcgttctatttcaagaacgaagcaactcgatcagcttgg
atgactgctcttctcctatccaaatcaaatgtgtcgcctactgaatatctccgcgatacc
aatcacaaggtttcatttcacagtcttagagtggacttggagaaaccatatacgtgtggt
gtttgtgagaaattgatgaaagggttgcggtaccaaggatataagtgtgaatcgtgtgaa
atgataatgcacaaggattgtctcggtctcaagaaatgtgaggctattcgtcgatctaca
cacgaacacagaagttctcacagttttaacatcagtagaccacgtttaacggtccgtgaa
ggcgacgtcgttactgccagctcaacagtcattccacaagatctgtcgtaccttcagttc
acaaagggagacacaattgaagtgatcaaaatgcagtctcataatcggttcactggttgc
gtctcgaataatcgcaacagaacgggacttgtacatctcgaccacatttctaaaccacgg
accacatcgatgatcggactcagcccaatggaatcgccagctggatcgattgttcgcatc
ggccgacacgaatcgactgttttaccgaataaaccgttatctgatcctagtgccagaagc
tctgatccccagttgtcaagaacatcgcgcacttcttctacatctacggttaatgggaac
aatgaaaatgggcggcctcaagaatacgttaacactgagatagcgggtttcagatggtat
atgggtgagatggaacgaactaaagcggagagcacgttacgtggaacaccgaatggtaca
tttttggtcagatatagcaagaaccgtaaacagactgcaatcagtttgagctataaaaat
gatgtgaagcacatgattattgagaagaatcaagatgggaaaatgtatttggacgaagat
tacattttcaattctactgtggagctcgtgcaatactatcgtgaccacaacttgattgag
attttccaagcacttgacacatgtctaaaagttccatattcagcatgcaaggtctacaaa
gctgtgcacgactacgatcccccttctcccaacagcgacggcaaatttctttcgttcaaa
actggtgacaccgttgtattactagacactgtaggagaggatcgaggatggtggaaaggt
caagttaacaacaagaccggattctttccgctgagctacgtcaaagccctcgaatcaatc
tctgatgataatggaccatccacaccaacgtcttccagctcttaa
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