Caenorhabditis remanei (nematode): GCK72_023605
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Entry
GCK72_023605 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K26226
liprin-alpha
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
GCK72_023605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crq04131
]
GCK72_023605
Membrane trafficking [BR:
crq04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
GCK72_023605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIP-1
SAM_1
SAM_2
DUF8124
DUF7626
Motif
Other DBs
NCBI-GeneID:
9821398
NCBI-ProteinID:
XP_003109479
UniProt:
A0A6A5FXA3
E3M204
LinkDB
All DBs
Position
X:complement(<8320084..>8324452)
Genome browser
AA seq
1127 aa
AA seq
DB search
MSFSNGTINCDIMPTISEDGVDNGGPLDEATDRDNIEQLMMNMLEDRDKLQDQLDAYKVQ
LENAILRTKEVEKERDIMKRQFEVHTQNLPQEMQSLTRELCQHKEQLLEKDEEIVELKAE
RNNTRLLLEHLECLVSRHERSLRMTVMKRQAQNHAGVSSEVEVLKALKSLFEHHKALDEK
VRERLRVAMERVATLEDELTTKGEENASLKARCATYAAEAEEAMASNARTNGSISSESAN
RLIEMQEALERMKTELANSLKQSNEVTTRNAELEDQLTEDTREKHAAQESIVRLKNQICE
LDAQRTDQETRITTLESRFLTAQRESTCIRDLNDKLEHQLANKDAAVRLNEEKVHSLQER
LELAEKQLAQSLKKAESLPSVEAELQQRMEALTAAEQKSVSAEERIQRLDRNIQELQAEL
ERAVQRERMNEEHSQRLSSTVDKLLSESNDRLQLHLKERMQALDDKNRLTQQLDGTKKIY
DQAERIKDRLQRDNESLRQEIEALRQQLYNARTAQFQSRMHAIPFTHAQNIVQAQPPTSI
AQQSAYSVYKQPNQQYQTVGMRRTNKGRIAALQEDPNKVQTLNEQEWDRLQQAHVLANVQ
QAFSSSPSLVDVGQSTLPRPNTAVQHQQDDMIASGMGMQSGMQPGMQGSMQGGMQGGMGG
GQDAHMLASMLQDRLDAINTEIRLIQQEKHHAERVAEQLERSSREFYDDQGISTRSSPRA
SPQLDAMRQHKYNTLPANVSGDRRYDIYGNPQFADDRMVRDLDYEPRRGYNQFDDMQYER
DRMSPASSVASSTDGLGGKKKRSNSSSGLKTLGRFFNKKKNSSSDLFKRNGEYSDGEQSG
TEGNQKADYDRRKKKKHELLEEAMKARTPFALWNGPTVVAWLELWVGMPAWYVAACRANV
KSGAIMSALSDQEIQKEIGISNPLHRLKLRLAIQEMVSLTSPSAPRTARLTLAFGDMNHE
YIGNDWLPSLGLAQYRSAFMECLLDARMLEHLSKRDLRTHLRMVDTFHRTSLQYGIMCLK
KVNYDKKVLAERRKACDNINTDLLVWSNERVQRWVEEIGLGAFSRNLMDSGIHGALIALD
ETFDSSAFAYALQMGSQDIANRQILDKKFQALVNDHRQQMDPHPVMP
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcagcaatggaaccataaattgcgacatcatgccaacaatctccgaagatggg
gtggacaacggtggtccgttggatgaggccaccgatagagataacattgaacagttgatg
atgaacatgttggaagatcgagataagttacaggatcaactggatgcttataaagttcag
ctggaaaatgcaattctcagaacaaaggaagtggaaaaagaacgagatatcatgaagcga
cagttcgaagtgcatacgcaaaatttaccgcaggaaatgcaatcattgacgcgagaatta
tgccaacacaaggagcagctactggaaaaagatgaagagatcgttgaactgaaagcagaa
cggaacaacacacgtcttctactcgagcatctggaatgtcttgtttcccgtcatgaaaga
tcactcaggatgacggtcatgaaaaggcaggcccaaaatcatgctggagtgtcgtcagaa
gttgaagttctgaaagcgttaaaaagcctgtttgagcaccataaagcgttggatgagaag
gttcgtgaacgtcttcgtgttgcaatggagcgtgtggcgacacttgaagacgagctgacc
acaaaaggagaagaaaatgcatcattgaaagcgcgttgtgccacttacgctgcagaagca
gaagaagcaatggcttccaacgcacgcacaaatggttcaattagcagtgagagtgcaaat
cggctcattgaaatgcaagaagcattggaaaggatgaagacggaactggcaaattctctg
aaacaatcgaatgaggtcaccacaagaaacgccgaacttgaggatcaattaactgaagat
acccgtgagaaacatgccgcacaagagtcaatagttcgtttgaagaatcaaatttgcgag
cttgacgcacaacggaccgatcaagagacacggataacaacgcttgagtcgcgtttcctg
actgcacaaagggagtcaacttgtatccgggatctcaatgacaaattggagcatcagttg
gccaataaggatgcggctgtcaggttgaatgaagagaaggtgcattcccttcaagaaaga
ttggaattggcagagaagcaacttgcgcaaagtctcaaaaaagcagagtcacttccgtca
gttgaagcagaattgcaacaaaggatggaggcactcactgctgctgaacagaagagtgtg
tccgctgaagagcgtattcaacggctcgatagaaacattcaagagttgcaagctgaatta
gagagagctgtgcaaagggaacggatgaatgaagaacatagtcaacgattgagtagtact
gtcgacaaactcctctcggaatcgaacgatcggttacagcttcatctcaaagaacgtatg
caagcactggatgacaagaatcggttaacccagcagcttgacggcacgaagaagatctac
gatcaagcagaacgtattaaagaccgactacagagagataatgagtcacttcggcaggaa
atcgaggccttgaggcaacagctgtataatgccagaacagctcaattccaatccaggatg
catgccattccatttacccatgcccaaaatattgtgcaagctcaaccaccaacttccata
gcgcaacaatctgcttattcagtttacaaacaaccaaatcaacaatatcagactgttggc
atgagaaggacaaacaaaggtcggatagctgcacttcaggaagacccgaataaagtccaa
acactcaatgagcaagaatgggaccgattacagcaagctcatgttctggcgaatgttcaa
caagctttttcttcatcaccatcgcttgttgatgtcggtcaatctacattgccacgtcca
aatactgctgtgcagcatcaacaagatgatatgattgctagtgggatgggaatgcaaagt
ggaatgcaaccaggaatgcaaggcagtatgcaaggtggaatgcaaggaggaatgggcggt
gggcaggatgctcatatgttggcatcgatgctacaagaccgactggatgctatcaatact
gaaattaggctgattcaacaagagaaacatcatgcagagcgagtagcagaacagttagaa
cgctcaagtcgagaattctatgatgaccaaggaatatccacaagaagttctccaagagca
agtccccaattagacgccatgcgacagcacaagtacaacacgctgccagcaaatgtgtct
ggtgaccgacgttatgacatttatggtaatcctcaatttgctgatgaccgtatggttcga
gatttggactacgagccgcgtcgaggatacaaccaattcgacgacatgcaatatgaaaga
gatcgaatgagtcctgcatcgtcagtcgcttcctcgacagatggtcttggtggaaagaaa
aagagatcgaatagctcaagtggattgaagacgcttggcaggtttttcaataagaagaag
aattcatccagtgatttattcaagagaaatggcgagtattccgatggagaacaatcgggg
accgaaggaaaccagaaagctgactatgacaggaggaaaaagaagaagcacgaattattg
gaggaagcaatgaaagcacgaactccgtttgctttgtggaatggaccaactgtagttgct
tggctcgaactgtgggttggtatgcccgcgtggtatgtggcggcgtgcagagcaaatgtc
aagtcaggagcaatcatgtcagctttgagtgatcaggaaatccagaaagaaattggaatc
tcaaatcccctccacaggctgaaattaagactagcaattcaggaaatggtatctctaaca
tctccatctgcgcctcgcactgcccgtctgacacttgcatttggagatatgaaccacgaa
tacatcggtaacgattggctgcctagtctcggtcttgcgcaataccgatcggcgtttatg
gaatgtcttctggatgcgcgtatgttagaacatctctcaaaacgtgacctgcgtacacat
ctccgtatggttgatacattccatcgcacaagtctccaatacggaataatgtgtctgaag
aaagtcaattacgataagaaagtgttggcggagagaagaaaggcgtgcgacaatatcaac
acagatttgctcgtatggtcaaatgaacgagttcagcgatgggtggaggaaataggattg
ggcgccttttcaagaaacttgatggatagtggaattcatggtgctttgattgcactggat
gagacttttgattcttcagcatttgcctacgcactgcaaatgggatctcaagatatagcc
aatagacagatccttgataaaaagttccaagcgctcgtcaatgatcaccgtcaacaaatg
gatccccatccggtaatgccataa
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