KEGG   Caenorhabditis remanei (nematode): GCK72_024411
Entry
GCK72_024411      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K08486  syntaxin 1B/2/3
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:crq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    GCK72_024411
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:crq04131]
    GCK72_024411
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:crq04147]
    GCK72_024411
Membrane trafficking [BR:crq04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    GCK72_024411
Exosome [BR:crq04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   GCK72_024411
  Exosomal proteins of other body fluids (saliva and urine)
   GCK72_024411
SSDB
Motif
Pfam: SNARE Syntaxin T2SSF DUF4064 Synaptobrevin DUF2721 DUF3566 RNA_pol_assoc_N OPT SYNE3 DUF365 EndoS_helical 7TM-7TMR_HD DUF2207_C
Other DBs
NCBI-GeneID: 9822483
NCBI-ProteinID: XP_003118432
UniProt: E3LE21
LinkDB
Position
X
AA seq 363 aa
MPRDRLQELREKASGNHIYHEPETKDPANQPLIDPSADFGMFLERCSNLRQSLKSLDDEY
DAIVQLHGSLLSTPGADADNSVKLNNHSQMFITKADQIQKSLKILSEETRNLPANACGIS
RAKNEQVRAIYRTFETMMIKFNKEQEEYKDKAKRKIVDYLKIRNMQLSDEEIEDAVSSGN
LSELTKGVMLALNEKKALYDDVKSRADELKNLERQMGELAQMFHDLHILIVSQGEMVDHI
ENSVHNATEYAQRARGNVEEARTLQKRARKMKVCIIIGAIIAVLILLVFFQAAKTMTNHH
IERDLHSASVYTHQARSDVAEARKLQQRAQAMKVCIVIGVIIAILILIFAFLESNMCQFL
SIC
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgccacgagatagattacaggagttgagggagaaagcttccggaaaccatatttatcat
gaacctgagacaaaagatccagccaaccagcctctcatcgacccatctgccgattttgga
atgtttctggaacgatgttcgaacctccgacaaagtctgaaaagtctagatgatgagtat
gacgccatagtacaacttcatggatctcttctctcaacccctggagcggatgcagataac
tccgtcaaactgaataatcactcacagatgtttatcacaaaagcagatcaaatacagaaa
agtttgaaaatactatcggaggaaactaggaatttacctgcaaacgcgtgtggaatctct
cgggcaaagaacgaacaagtacgggcaatctacagaacattcgaaactatgatgatcaag
ttcaataaggaacaagaagaatataaagacaaggcaaaaaggaaaatagttgactacttg
aaaattagaaacatgcagcttagcgatgaggaaatcgaagacgcagtatcttcaggaaac
ttgtcagaactgacgaaaggtgttatgctggcgttgaatgagaagaaggcactgtatgat
gatgtcaaatcacgtgctgacgaattgaagaatctggaacgacagatgggagaactcgcg
caaatgttccatgatctccacattctgattgtcagtcaaggcgagatggtggaccatatt
gagaatagcgttcataacgctactgaatatgctcagagagcccgtggaaacgttgaagaa
gctcgaacactgcagaaacgtgctagaaagatgaaagtgtgcatcatcatcggagcaatc
attgcagtattgatccttcttgtcttcttccaagctgctaagacaatgaccaatcatcat
atcgaacgtgatcttcacagcgcttctgtatacactcatcaagctcgttcggatgtcgca
gaggcaagaaaactccaacaacgagcccaagccatgaaggtgtgcattgtcattggtgtc
atcattgctatcttgattctgatttttgcttttcttgagtcaaacatgtgccaattcttg
tccatttgctga

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