Caenorhabditis remanei (nematode): GCK72_024647
Help
Entry
GCK72_024647 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K17906
autophagy-related protein 2
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq04136
Autophagy - other
crq04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
GCK72_024647
04136 Autophagy - other
GCK72_024647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crq04131
]
GCK72_024647
03029 Mitochondrial biogenesis [BR:
crq03029
]
GCK72_024647
Membrane trafficking [BR:
crq04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
GCK72_024647
Mitochondrial biogenesis [BR:
crq03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
GCK72_024647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
9822076
NCBI-ProteinID:
XP_053579543
UniProt:
A0A6A5FZV3
LinkDB
All DBs
Position
X:13363194..13371549
Genome browser
AA seq
2282 aa
AA seq
DB search
MTLHTINRVWCKIMIQRYLGVWLDNNLSFDQLSIELSNGSLELECLDINTRAVSAALAAG
SIPLKLVDGYVGKIRIEIPWVRIMTDPTRMSIEDLQLTFRGADVVKLDDMETITSMIESV
LMSLSTDDMARSVFDEVSKENTITMDFKGNEETADSFSGIINAVWSRFCLTVHNLTLRFE
NEPKNKSEMATAVEIHVQKITFMDEQMRSCEMDHTNATDLVTTQPHGVGSTTNLNKNLTF
HGVSIHTDVFSEIANEGNEDEILITSMHIRREKAKQMSPTKSVYNSSHPDMFQSAMSDMD
AFHSCYDKLTQESTSPDQLETLRTAPAEPELFSNPIKCGEVIGDISCVFRIKNAANDVNV
ADIEESKIETDIFVKGLNLFATASQIEIMKRYFLSITTPKGIIVQEQGKPMSKEDYENMT
KNMEPNQTPEAPISVPTFGGNWNAGEEFKEFENAKSLKQKEKEKSEKEKFKTLKANSNVK
EEFTVRTHIGTLLAYIPHCDYMSSDYARQHGGYGKVLEALQKESKQFFNGIQGFSFLSKH
GLANIRQAAEAFYPKDHLRVIGGSLAVTSSSSRIGTVDTFSCRINATHFDMLEYLTPESA
PGHNGPLTVNILDYSNQENVECDPNFKMVLRTSSEKKGETKIDVLLGAVRSELDFSIIDR
ISNLIICKPFFDDESEKGAQRNKVPQLKDDLYAEANATEDDAKSKTLFNLVCPNWQVDLR
IPKADLRDPTGSRLPFSQRHVHNEYLSLGIKEIDVSIPIGKDVSFIEILCSEMFGDFCGE
GLNIPKEQQRVLYASKNGFDKINLKLALNGNTKIPGRDSTSSSIPESMLKSVSADIMMAH
PKKEGPFSKVPRSYMSHDGEEKEEIIQAGTRREILSFQKDCEDFASTFMLFTIPVLKLHI
PEKSFLEILYNRLVNDLALFQPAAPAFRAEADAVTNAQPVESFQECVSPKNYAESEHSES
DDDALTLKESVDSIDFDRDVPHTFVMTLNAKKCAILCNTSIKEDEKAPEAAQVSLDLEKV
HIGTTAGYHGDINHTYFHFTSSKAAVGSVDALKGVQIPNVISAKDFGKWNKDLNQLEYVL
ATDELSSGSTEDAFAVALHMNFKPDVNVKDVLVGIAIRNSQLQAKPFKNWGAFWITQLSE
LFTLQDYAIPGYVLPTVSTDLHICLENAIIGYDHSWINPSSKLKLRAALGHCNLASSIVS
DMNISKTLCIFESCRLYMSHDSLKDAVRFEGYGAPKAPTKKFIPFLDFGSVQLDILFAVG
EETGSRTTPAFEIRCQNDIINAWACADSLATFIQTVMEYTSHGQVPVKTPAEEETDELEK
SIKNEDIAKSVAGESVWSDASTGSKHIQKMGVGAALPDDVEKRLQAMIREAVDENDESAG
IAIGEDAVKEFTMTKPKPKKPSRKPSKNMEDPTRNYTITDEEFCMVDDNVFGSGITNLPG
ESRVRSMTAKNKYDEPPLTKQDFFHSIEESGNDGLYQTMSGNWTPALRYFLKDVTLRLSL
YAGNDLSTTPSPIRTYCTEEYRNGYGPEQKIEKNSAGGPNRDHSAFVVLELNRITYLKQV
FEKNAPLLSTSLFQIGDVVIKDCVKASTIQEMLYQYSVVNQPRRGSAPIFSVRIAESQSK
EGKMRVSMLPIKINVDQDTMEFLIEFFEETSRLLDLPKNQMNPLIQRPVIEVPAEPSSRK
TSPKTSVSSSEGDVAPRMYPSIPEPAMTLEPLQPSPVQPATPLGDLSYLEKISSNHQSPV
KRPIIDAPLTASAVSIGRIFESPKNEVDDEPVDPIQIEEMGNFNINEELRRINELGKSKS
SPLFNDSESESSDEEDETNTDFVVPHTSQHQKLHESFDHAHPADLSDLAGDWADDDDSID
HFTAHTENDHYHNSKTTKCEELQTLNLMDEEESGKGSMTSPMPSSPLRSTRSVKRELPPL
KMPQQPLSNDDILLRSTMMGSIHPTQSVHNLVDTSDDLEEHSNFLDGLDDDEDEEKQNVE
EEMEEEQKKEEEERDKEIQEAVERGETFFKQFVFSPSVNIYVDYQGKRKITMEKQGAIVG
LLMAFGQLNQMPITLKKINTRTGLLGSGRCMQHAIGEWSGDMLTNMPSVIASYGPISPLV
QIGRGVVDLFWMPVSEFRKNDGNVMKGVQRGVGSFSVSSAAGIVGMAQTVTGFVQSLAEM
TMNEIKPDDPSTRRSRRYNRHHGTNPTDVRHSLQLAYGILYDGYHQTRDDLELAAQEDRA
SGNSVVRSAFRYAVPTFLGPIVMATQVTYQLLGGLRNQLRPDTYQDERRKWGEKDVPGGV
NK
NT seq
6849 nt
NT seq
+upstream
nt +downstream
nt
atgacactgcacaccataaatcgggtatggtgcaaaataatgatccagagatacctcggg
gtatggctggacaacaatttatcatttgaccagctatccatcgagctatcgaatggatca
ttagaattggaatgtctagatatcaacactagagcagtcagtgcggctctagccgccgga
agtatcccactgaaattggtggatggatacgtggggaagatcagaatcgagatcccctgg
gtgcgaattatgacggacccaacaagaatgagcatagaagatctgcaactcacattcaga
ggagcagatgtcgtgaaactcgatgacatggaaacaataacttccatgatcgagagcgtc
ctgatgagcctcagcacggacgatatggcgagaagtgttttcgatgaggtgtccaaagag
aacaccatcacaatggacttcaaaggaaacgaagagaccgccgacagcttttctggaatc
atcaacgcagtgtggtcccgattttgtttgacagttcataatctgactcttcgatttgaa
aacgagccgaagaataaatcagagatggccactgccgttgaaatccatgtgcagaaaatc
acatttatggatgagcagatgcgctcgtgcgagatggaccacacgaacgcaaccgatttg
gtaaccactcaaccacacggcgttggatcgaccaccaatttgaataagaacctcacattc
cacggagtctctatccacactgacgttttctctgaaattgccaacgagggaaatgaagat
gaaattctcatcaccagcatgcacatcaggagagaaaaagccaagcagatgtcaccaaca
aagtctgtctacaattcatcacatccagacatgttccaatcggctatgagcgacatggac
gcgttccactcttgttatgataaattgacacaagaatccacgtcgcctgaccagctcgag
acattgagaaccgctcctgcagaaccagagctattttcaaaccccatcaaatgtggcgag
gttatcggtgacatttcctgtgtgtttcggataaaaaatgcggctaacgatgttaatgtg
gcggatattgaggagtcgaaaattgagacagacatatttgtgaaaggactgaacttgttt
gcaacagcatcgcaaattgaaatcatgaaaagatatttcttgtctatcacaactccaaaa
ggaattattgttcaagagcaaggaaaaccaatgagcaaagaagactatgagaacatgacg
aagaatatggagccaaatcaaacaccagaagctccaatctcggtcccaacgtttggcggt
aactggaatgctggcgaggagttcaaggaattcgagaatgcaaagtcattaaaacaaaag
gagaaggaaaagagcgagaaagagaaattcaagacgttgaaagcgaacagcaatgtcaaa
gaagaattcacagtgcgaactcacattggaacactgctggcgtatattccacactgtgat
tacatgtcttccgactatgctcgtcaacacggtggttatggaaaagttctggaggctctt
caaaaggaatcgaagcaattcttcaacgggattcaaggattttcgttcctctcaaaacac
ggactcgccaacatccgccaagctgcagaggccttctacccaaaagaccatttgagagtc
attggaggatcattggctgtcacttccagcagctcaagaattggaactgtcgacacgttc
tcttgccgcatcaatgctacacatttcgacatgttggagtacctcacaccagaaagcgct
ccaggtcacaatggtccgcttacagtcaacatccttgattattccaaccaagaaaatgtg
gaatgtgaccccaacttcaaaatggttctgagaacatcgtctgaaaagaagggagagacc
aagattgatgttcttcttggagccgtgcgttcggaactggatttctcgattattgatcgc
atctcaaatctgatcatctgcaaaccattctttgatgatgaatcggaaaagggtgcacaa
agaaataaagtgccgcaactgaaggacgacctatatgccgaagcgaatgctactgaagat
gacgcaaaatctaagactctcttcaatcttgtgtgtcccaactggcaagtggacctgaga
attccaaaagcagatctccgcgacccaactggatctcgtcttccattctctcagaggcat
gtgcacaatgaatatctttcattgggaatcaaggaaatcgatgtttcaattccaatcggg
aaagatgtctctttcatcgaaattctgtgctcagaaatgtttggagacttctgtggagaa
ggattaaacattccaaaagagcaacagagagttctctatgcttccaaaaatggatttgat
aagatcaatttgaaattggcactcaatggaaacacaaaaatcccaggcagagattcaaca
tcaagcagcatcccagaaagcatgctgaaatcagtgtctgctgatatcatgatggctcat
ccaaagaaagaaggtccgttctcaaaagttccgcgctcgtatatgtcacatgatggagaa
gaaaaggaagagataatccaagcaggaacacgtcgagagattctctctttccagaaggac
tgtgaagatttcgcgtcaacatttatgttgttcacaattccagtcttgaaactgcacatt
ccagagaaaagtttcctagagattctttacaacagattggtaaatgacctggctctgttc
caaccagccgccccggccttccgtgctgaagcggatgcagtcaccaacgcgcagccggta
gagtcattccaagaatgtgtctcgcccaaaaactacgctgaaagtgaacattctgagtcg
gatgatgatgctttaacgttgaaagagagtgtggacagcattgattttgacagagatgtg
ccgcacacttttgtgatgacactcaatgccaagaaatgtgcgatcctttgcaacacttca
attaaagaggacgaaaaagcaccagaagccgctcaagtttcgctcgatcttgaaaaagtg
cacattggaacaacagccggttaccatggtgatatcaaccacacgtatttccacttcacc
tcttcaaaagctgctgtgggaagtgtggatgcattaaaaggagtacaaattccaaatgtt
atttctgccaaggattttggaaagtggaataaggatttgaaccaactcgaatacgttctt
gccactgatgagttgagttccggttctacggaagacgctttcgctgttgccctccatatg
aatttcaagccggacgtcaacgtgaaagatgttttggttggaattgcaatcagaaattca
caacttcaagcaaaaccattcaagaactggggagcgttctggattactcaactatcggag
cttttcactcttcaagactacgctattcctggatatgtgcttccaactgtctcaacagac
cttcatatttgcttggaaaacgcaatcattggatacgatcactcatggatcaacccgagc
agtaaactgaagttgagagcagctctaggacattgtaatctggccagctcgattgtttcg
gatatgaatatctccaagacactctgcattttcgagagctgccgattgtacatgagtcac
gattccctcaaggatgctgttagatttgaaggatatggagcaccaaaagcgccaaccaaa
aagttcattccattcctcgattttggttcagttcaactagacattttatttgctgtcgga
gaagagaccggttcgagaaccacccctgcattcgaaatccgctgtcaaaacgacatcata
aacgcatgggcgtgtgcggattctctcgccacttttattcaaacggtgatggaatatacc
agtcacggacaggttccagtgaaaacacccgccgaggaggaaactgatgagttggaaaaa
tcgataaagaatgaggatatcgcgaagagtgtagcgggagaatcggtttggagtgatgca
tcgacagggagcaaacatattcagaaaatgggagtcggtgcagctctacctgatgatgtt
gagaaaagacttcaagcaatgatcagagaagcagtcgacgagaacgatgagagtgctgga
attgctattggagaggatgctgtcaaagaattcacaatgacaaaaccaaaaccgaagaaa
ccttcccgcaaaccatcaaaaaatatggaagatcccaccagaaactacactatcaccgat
gaagagttctgtatggtggatgacaacgtattcggatctgggataactaatcttccgggt
gaatctcgagtcagatcaatgacagcaaagaacaagtatgacgagccgccactcaccaaa
caagactttttccattcgatcgaagaaagtggaaatgacggattgtaccaaacgatgtct
ggaaactggacaccagctctgagatacttcttgaaagatgtgacactcagactcagtttg
tatgctggaaatgatctgtcaaccactccatctcctatcagaacttattgcaccgaggaa
tacagaaatggatatggaccagaacaaaaaattgagaagaactcagctggaggacccaac
cgagatcactcagcgttcgtggttcttgaattgaataggattacctacttgaaacaagtc
ttcgagaaaaacgcccctcttctttcaacttctctcttccaaatcggcgatgttgtaatt
aaggactgtgtgaaagcaagtaccatccaagaaatgctctaccagtattccgtggtgaat
caaccaagacgtggaagtgctccaatcttcagtgtgagaatagcggagtctcaatcaaag
gaaggaaagatgagagtttccatgcttcctatcaaaatcaacgtcgaccaagacactatg
gagttcctcattgagttctttgaagaaacatcgaggcttcttgacctcccgaaaaaccag
atgaacccattgattcaacgaccagtcatcgaagttccagcagagcccagttcaagaaaa
acttcaccaaaaacatcggtttcatcatcagaaggagacgttgccccacgtatgtaccca
agcatcccggagcctgcaatgactctggaaccactccaaccatctccagtacaaccagct
actccacttggtgacctgtcgtacctcgagaaaatctcatccaaccatcaatctcctgtc
aaacgtccaattattgacgctcctctaaccgcttctgctgtttctatcggcagaatcttc
gaatctccaaagaacgaagtggacgatgagcctgttgatccgattcaaatcgaagaaatg
ggcaatttcaacatcaatgaagaactccgaagaatcaacgaattgggaaaatcaaaatca
agtccacttttcaatgactccgaatcagaatcaagcgatgaagaagatgagacgaacact
gattttgttgtcccacacacgtctcaacaccagaaattgcacgaatcttttgatcatgcg
cacccagctgatctttctgatctcgccggtgactgggctgatgacgatgacagtattgac
cacttcactgctcacactgaaaatgaccattatcacaattctaaaacgacgaagtgtgaa
gagttacaaacattgaatttgatggatgaggaggagtctggaaaaggatcaatgacctct
ccaatgccgtcaagtccactacgatctacacgaagtgtgaaaagagagctcccaccactt
aagatgccacaacaaccactttcgaatgatgatattctcttgaggtctacgatgatggga
tcgattcatccaactcaaagtgttcacaatttagtagataccagtgacgatttggaggag
cattcaaacttcttggatggtcttgacgatgatgaagacgaggagaaacaaaacgttgaa
gaagaaatggaagaagagcaaaagaaggaagaagaggaaagagacaaggagattcaagaa
gctgttgaacgaggagaaacattcttcaagcaattcgtattctctccatccgtcaacatt
tatgtggactaccaaggaaaacggaagatcaccatggagaagcagggagcaatcgtcggt
cttcttatggcattcggccagctcaaccagatgcctatcaccctcaaaaagatcaataca
cgtaccggattgctaggatctggacgttgtatgcagcacgctataggagaatggtcggga
gacatgctgactaacatgccaagtgtaatcgcaagctatggaccaatcagtccactggtt
caaattggaagaggtgtggttgatctcttctggatgccagtttccgaattccgcaagaat
gatggaaacgtgatgaaaggagtacaacgaggagtgggatcattcagtgtctcctcagcg
gctggaattgttggaatggcccagacagtcactggctttgttcagagtcttgctgaaatg
accatgaatgaaatcaagcctgatgatccatccacgagaagatctagaagatacaacaga
caccacggcaccaatccaacagatgtccgtcacagtttgcagttggcttatggaattctt
tatgatggataccaccaaaccagagatgacctcgagttggctgctcaggaagatcgagct
tctggaaactctgtcgtgcgtagcgcattccgatacgcagttccaacattcttgggacca
attgtgatggccactcaagttacctaccaacttcttggtggtctacgaaatcaactccgt
ccggacacttatcaagacgaacggcggaaatggggagagaaagatgtgcctggaggtgtc
aataaatga
DBGET
integrated database retrieval system