KEGG   Caenorhabditis remanei (nematode): GCK72_024752
Entry
GCK72_024752      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K17589  RB1-inducible coiled-coil protein 1
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:crq00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    GCK72_024752
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:crq01009]
    GCK72_024752
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:crq04131]
    GCK72_024752
   03029 Mitochondrial biogenesis [BR:crq03029]
    GCK72_024752
Protein phosphatases and associated proteins [BR:crq01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     GCK72_024752
Membrane trafficking [BR:crq04131]
 Autophagy
  Autophagosome formation proteins
   ULK complex
    GCK72_024752
Mitochondrial biogenesis [BR:crq03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-independent mechanism factors
    GCK72_024752
SSDB
Motif
Pfam: ATG11
Other DBs
NCBI-GeneID: 9824453
NCBI-ProteinID: XP_053579593
UniProt: A0A6A5G0V4
LinkDB
Position
X:<13891810..>13897361
AA seq 1340 aa
MIMYHIFYMDRGQCMLFNLNAEATTFNGLLDMVSKEVGHRISDLIILDENGTAPDGNKAL
ADLSAYGNATAPVYLFLKSGTDRENHNCSDVTYIFQMIDDAVEQAQYVLKYEDPLKIYME
LPERARTCKKVCGESLQMCATLVQQHRFLHKGWLALINNLDSSVTKMAKRGKKFRTVHTK
MEELVEKSESLLLNYSDVVEQLRRIEVPMEILIKPAPMMASTTSPINSEEKCTLFDFISR
ADPNASLDDLPELVHEKIRQLKEHNVKHVYTTLQSVHDQSKNVEFRDFKGINKRFSQLEF
SLKSCEERKEKVNRLVSAILETPKINDQSRLPPIIEEHRQYMQSIFDCFVEFRNMVRVFD
QSKQEILKNLRTRMSGFVVQSYDRLRNVLNDIVQFEYKGNAVRIHMDLIGQIRDAPILYS
QSVSEIVRRRFLKAELEDWHTDHSTKCGQFSSDEEKSREQLGRKLKKHFLHALFPGLFDN
LPEFFVKAPLKEYDTDLPFIAKDYIRELREALPELEPYLKVTVPNVAGKLATKGVKAHPP
FGQTRVESFLTEEPMRMARSHFNYSPAAWLSEDGGDSSPIPQPVMCRSPDNALRESQCRS
IPYVPSLQQLEGLDAPAPGSSAPISIPNASSSRINFKQSGRQMSSQDLTQVGSAVSSDTS
LLGHETPVKIQDTVMMMEKQSELQQQSNMSDSNESIDSLMDVYETIDYPAEDILVGLSDK
TGQLEDAVKRLGKMQTLVSNMQPKNERLFKYLHQTAPRDFELIIHDGDKLKNRIKELGES
VECLEVELETRRSTETGLEAKLAEMTVSHKKDIEETQAECIKRMSVEFELMTDSMSRQSK
ELIESKDREIEELKAKLEKQTLSHEKALRNDPYTEEYKRNLTAEIRAELEKEFKQRIEII
TKAVECKKDEAFARQEKTLEIENRVLSSENEVKSKKLEAMNCEKEQLESLIRQMPDGEII
LEEFNALKESQPSVHIKDKFAAIRSKMDRSTDSRCLDNNKVLLIDNILKIHKLQQLVDER
LKYKEVIKSQPGGEQVLQCLESSTPSVAVDMETFWKELTSYSGAFDEAGRKITKIHELEM
EAVWLQALVRANPSGPNIRDISAELHKENHQKDVETVTSISMMDIFMDHDREEIKKLART
MQMWMNAYVTSLRSGGTYAIEDSPKIKECAAKYKSHIMKNSSYHGMEESFFQPMAASTIQ
HKPAQEDLSFEVERCSQNTMSTQTRLCLPAMNLLVSVQDIKVGSAVLVIWHQAHNAYVIF
CSSPHRFFVKESSIRRLGINTQDPTTRRNWIIARVVRSDSCSIKKPINRYNLSVGTIVRR
VEVETVSMDFEGDFQKISIA
NT seq 4023 nt   +upstreamnt  +downstreamnt
atgattatgtatcatatattctacatggatagggggcagtgtatgttatttaatctaaat
gcagaagcaacgacgttcaacgggttgctggatatggtctccaaggaagtgggtcatcga
atctcagacctgatcatccttgacgagaacggtacagcacctgacggaaacaaagctctc
gcagatctcagtgcttatggaaatgccacagctcccgtctacttgtttctgaaatccgga
actgaccgagaaaaccacaattgcagcgatgtcacgtatatatttcagatgattgacgac
gctgtggaacaggcgcagtacgttctgaagtatgaagacccgcttaagatctatatggaa
ctgccagaacgtgcaaggacttgcaaaaaagtttgtggagagtcgttacaaatgtgcgcc
acattggtacaacaacatcgatttctgcataaggggtggcttgcactaatcaacaacttg
gacagttcagtcactaaaatggccaaaagagggaagaaattcagaactgtgcatactaaa
atggaggaacttgtcgaaaaatcggaatctctcctcttgaactactcggacgttgttgag
caattgcggaggatagaggttccaatggaaatcttgataaaaccggctccaatgatggca
tcaaccacgtcaccaatcaattcggaggagaaatgcacattgttcgacttcatctcaaga
gcggacccgaatgcatctctagacgatctgcctgaattagtccatgagaaaatcagacaa
cttaaggaacataatgtaaaacatgtatatacaacattgcaatcagtgcacgatcaatcg
aaaaatgtggagtttcgagatttcaaagggatcaacaagagattctcgcaactggagttt
agcctaaaaagctgtgaagaacgcaaagagaaagtgaatcgacttgtctctgcaatcttg
gagactccgaaaatcaatgaccaaagcagactccctccgatcattgaagaacatcgtcaa
tatatgcaatctatcttcgactgcttcgtagaatttcgtaatatggtccgagttttcgac
caatcgaaacaagaaattctgaaaaatctgcgaacgagaatgtctggatttgtagtgcag
tcatacgacagacttcgaaacgttttgaatgatattgtacaatttgaatacaaagggaat
gcagttcggattcatatggacttgattggacagattcgtgatgcacccattttgtattct
caaagtgtgtcagaaattgttcggcgacgttttttgaaagcagaactggaagattggcat
actgaccattcgacaaaatgcggacaattcagttctgatgaggaaaaaagccgagaacaa
ctaggccgaaagctgaagaaacatttccttcatgcactcttccctggtctcttcgataat
ttgccagaattctttgtaaaagcaccactgaaggaatatgacactgatttaccatttatt
gccaaggattacatcagagaacttcgagaagcacttcccgaacttgaaccatatttgaag
gttaccgttccaaatgttgctggcaagctggctacaaaaggagtcaaagctcaccctcca
tttggacaaactcgcgttgagagtttcttgacagaggaaccaatgagaatggctcgctca
cactttaattactccccggcagcatggctcagcgaagacggtggtgattcgtctccaatt
cctcaaccagtaatgtgccgatcaccagacaacgctctacgggagtctcaatgcagatca
attccatatgttccatctcttcaacaactggagggtttggatgcccctgcaccaggctca
tctgctccgatcagcattccaaatgcctcatcatctcgtatcaatttcaaacagtctggt
cgtcaaatgagttcacaagacttgactcaagttgggtcagcggtctcatcagacacatct
ttgctaggacatgaaactcctgtcaaaattcaagatactgttatgatgatggagaaacaa
tcggaacttcaacagcaatcaaacatgagcgatagcaatgagagtatcgattctttgatg
gatgtttatgagaccattgactacccagccgaagatattttggttggattgtcagataaa
accggtcaattggaagatgcagtaaaacgactagggaaaatgcaaaccctcgtgtccaac
atgcaaccgaaaaacgagcgtctattcaaatacctccatcaaacagctccacgcgatttc
gagttgatcatccatgacggcgacaagctgaaaaatcgtatcaaggaactcggcgagagt
gttgagtgccttgaagtggagttggaaactagaagaagcacggaaactggactggaagcc
aaacttgctgaaatgacagtttcacataagaaggatattgaagagacgcaagcggaatgc
attaaaaggatgtctgtggagtttgaactcatgacggatagcatgtcgagacagagcaaa
gagcttattgagagcaaggaccgtgaaattgaggaactgaaggccaaactagaaaaacag
acgctgtctcatgagaaagctcttcgcaacgacccctacacggaagaatacaaacggaac
ttgactgcagagattcgtgcagaactagagaaggagttcaaacaacgtatcgaaatcatc
accaaagctgttgaatgcaagaaagatgaagcgtttgcccggcaggaaaagactttggaa
atcgagaatcgtgttctgtcgtctgaaaacgaagtcaaatccaagaaactcgaggcaatg
aactgtgagaaggaacaacttgaatcgctgattcgccagatgccagatggagaaataatt
ttggaagaattcaacgctttgaaagagagtcaaccatccgtgcatatcaaagacaaattt
gctgctattagatccaaaatggatagaagtacggactccagatgcctcgacaacaacaaa
gtccttcttatcgacaacattctgaagattcataagcttcaacaactcgtcgatgaaaga
ttgaagtataaagaggttatcaagagtcaaccaggtggtgaacaagttttgcaatgcttg
gaatctagtaccccatccgtcgcagtcgatatggaaacattctggaaagagctcacgtca
tattctggagcattcgacgaggcaggccggaaaatcactaaaattcatgaattggagatg
gaagcagtgtggcttcaagctctcgtccgtgcgaatccaagtggtcccaacattagagac
atctcagccgagttgcacaaagaaaaccatcagaaggatgtcgaaactgttacatctata
tctatgatggatatcttcatggatcatgatagagaggaaatcaaaaaactcgctcgtaca
atgcaaatgtggatgaatgcttatgtgaccagtcttcgttctggaggaacatatgcaatt
gaggattctccaaaaatcaaggagtgtgctgctaagtacaaatcacatatcatgaaaaac
tcctcctaccacggtatggaagaaagcttcttccaaccaatggctgccagcaccatccaa
cacaaaccagcacaagaggatctctcttttgaagtagagcgatgcagtcagaatactatg
tccactcaaactcgtctttgtcttcctgccatgaatcttttggtttctgtacaagatatc
aaagttggctcagctgttctcgtgatctggcatcaagcacataacgcttatgtaatcttc
tgctccagcccacatcgctttttcgtgaaggagtcttcaatccgtcgccttggcatcaac
actcaagatcccactactcgacgcaactggattattgcaagagttgtccgttctgatagc
tgttccatcaagaaaccaattaatcggtacaacctctccgtgggaaccatcgtccgccgt
gttgaagttgaaactgtcagtatggattttgagggggacttccagaaaatatcaattgcc
tga

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