Caenorhabditis remanei (nematode): GCK72_024752
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Entry
GCK72_024752 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
GCK72_024752
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
crq01009
]
GCK72_024752
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crq04131
]
GCK72_024752
03029 Mitochondrial biogenesis [BR:
crq03029
]
GCK72_024752
Protein phosphatases and associated proteins [BR:
crq01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
GCK72_024752
Membrane trafficking [BR:
crq04131
]
Autophagy
Autophagosome formation proteins
ULK complex
GCK72_024752
Mitochondrial biogenesis [BR:
crq03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
GCK72_024752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
Motif
Other DBs
NCBI-GeneID:
9824453
NCBI-ProteinID:
XP_053579593
UniProt:
A0A6A5G0V4
LinkDB
All DBs
Position
X:<13891810..>13897361
Genome browser
AA seq
1340 aa
AA seq
DB search
MIMYHIFYMDRGQCMLFNLNAEATTFNGLLDMVSKEVGHRISDLIILDENGTAPDGNKAL
ADLSAYGNATAPVYLFLKSGTDRENHNCSDVTYIFQMIDDAVEQAQYVLKYEDPLKIYME
LPERARTCKKVCGESLQMCATLVQQHRFLHKGWLALINNLDSSVTKMAKRGKKFRTVHTK
MEELVEKSESLLLNYSDVVEQLRRIEVPMEILIKPAPMMASTTSPINSEEKCTLFDFISR
ADPNASLDDLPELVHEKIRQLKEHNVKHVYTTLQSVHDQSKNVEFRDFKGINKRFSQLEF
SLKSCEERKEKVNRLVSAILETPKINDQSRLPPIIEEHRQYMQSIFDCFVEFRNMVRVFD
QSKQEILKNLRTRMSGFVVQSYDRLRNVLNDIVQFEYKGNAVRIHMDLIGQIRDAPILYS
QSVSEIVRRRFLKAELEDWHTDHSTKCGQFSSDEEKSREQLGRKLKKHFLHALFPGLFDN
LPEFFVKAPLKEYDTDLPFIAKDYIRELREALPELEPYLKVTVPNVAGKLATKGVKAHPP
FGQTRVESFLTEEPMRMARSHFNYSPAAWLSEDGGDSSPIPQPVMCRSPDNALRESQCRS
IPYVPSLQQLEGLDAPAPGSSAPISIPNASSSRINFKQSGRQMSSQDLTQVGSAVSSDTS
LLGHETPVKIQDTVMMMEKQSELQQQSNMSDSNESIDSLMDVYETIDYPAEDILVGLSDK
TGQLEDAVKRLGKMQTLVSNMQPKNERLFKYLHQTAPRDFELIIHDGDKLKNRIKELGES
VECLEVELETRRSTETGLEAKLAEMTVSHKKDIEETQAECIKRMSVEFELMTDSMSRQSK
ELIESKDREIEELKAKLEKQTLSHEKALRNDPYTEEYKRNLTAEIRAELEKEFKQRIEII
TKAVECKKDEAFARQEKTLEIENRVLSSENEVKSKKLEAMNCEKEQLESLIRQMPDGEII
LEEFNALKESQPSVHIKDKFAAIRSKMDRSTDSRCLDNNKVLLIDNILKIHKLQQLVDER
LKYKEVIKSQPGGEQVLQCLESSTPSVAVDMETFWKELTSYSGAFDEAGRKITKIHELEM
EAVWLQALVRANPSGPNIRDISAELHKENHQKDVETVTSISMMDIFMDHDREEIKKLART
MQMWMNAYVTSLRSGGTYAIEDSPKIKECAAKYKSHIMKNSSYHGMEESFFQPMAASTIQ
HKPAQEDLSFEVERCSQNTMSTQTRLCLPAMNLLVSVQDIKVGSAVLVIWHQAHNAYVIF
CSSPHRFFVKESSIRRLGINTQDPTTRRNWIIARVVRSDSCSIKKPINRYNLSVGTIVRR
VEVETVSMDFEGDFQKISIA
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atgattatgtatcatatattctacatggatagggggcagtgtatgttatttaatctaaat
gcagaagcaacgacgttcaacgggttgctggatatggtctccaaggaagtgggtcatcga
atctcagacctgatcatccttgacgagaacggtacagcacctgacggaaacaaagctctc
gcagatctcagtgcttatggaaatgccacagctcccgtctacttgtttctgaaatccgga
actgaccgagaaaaccacaattgcagcgatgtcacgtatatatttcagatgattgacgac
gctgtggaacaggcgcagtacgttctgaagtatgaagacccgcttaagatctatatggaa
ctgccagaacgtgcaaggacttgcaaaaaagtttgtggagagtcgttacaaatgtgcgcc
acattggtacaacaacatcgatttctgcataaggggtggcttgcactaatcaacaacttg
gacagttcagtcactaaaatggccaaaagagggaagaaattcagaactgtgcatactaaa
atggaggaacttgtcgaaaaatcggaatctctcctcttgaactactcggacgttgttgag
caattgcggaggatagaggttccaatggaaatcttgataaaaccggctccaatgatggca
tcaaccacgtcaccaatcaattcggaggagaaatgcacattgttcgacttcatctcaaga
gcggacccgaatgcatctctagacgatctgcctgaattagtccatgagaaaatcagacaa
cttaaggaacataatgtaaaacatgtatatacaacattgcaatcagtgcacgatcaatcg
aaaaatgtggagtttcgagatttcaaagggatcaacaagagattctcgcaactggagttt
agcctaaaaagctgtgaagaacgcaaagagaaagtgaatcgacttgtctctgcaatcttg
gagactccgaaaatcaatgaccaaagcagactccctccgatcattgaagaacatcgtcaa
tatatgcaatctatcttcgactgcttcgtagaatttcgtaatatggtccgagttttcgac
caatcgaaacaagaaattctgaaaaatctgcgaacgagaatgtctggatttgtagtgcag
tcatacgacagacttcgaaacgttttgaatgatattgtacaatttgaatacaaagggaat
gcagttcggattcatatggacttgattggacagattcgtgatgcacccattttgtattct
caaagtgtgtcagaaattgttcggcgacgttttttgaaagcagaactggaagattggcat
actgaccattcgacaaaatgcggacaattcagttctgatgaggaaaaaagccgagaacaa
ctaggccgaaagctgaagaaacatttccttcatgcactcttccctggtctcttcgataat
ttgccagaattctttgtaaaagcaccactgaaggaatatgacactgatttaccatttatt
gccaaggattacatcagagaacttcgagaagcacttcccgaacttgaaccatatttgaag
gttaccgttccaaatgttgctggcaagctggctacaaaaggagtcaaagctcaccctcca
tttggacaaactcgcgttgagagtttcttgacagaggaaccaatgagaatggctcgctca
cactttaattactccccggcagcatggctcagcgaagacggtggtgattcgtctccaatt
cctcaaccagtaatgtgccgatcaccagacaacgctctacgggagtctcaatgcagatca
attccatatgttccatctcttcaacaactggagggtttggatgcccctgcaccaggctca
tctgctccgatcagcattccaaatgcctcatcatctcgtatcaatttcaaacagtctggt
cgtcaaatgagttcacaagacttgactcaagttgggtcagcggtctcatcagacacatct
ttgctaggacatgaaactcctgtcaaaattcaagatactgttatgatgatggagaaacaa
tcggaacttcaacagcaatcaaacatgagcgatagcaatgagagtatcgattctttgatg
gatgtttatgagaccattgactacccagccgaagatattttggttggattgtcagataaa
accggtcaattggaagatgcagtaaaacgactagggaaaatgcaaaccctcgtgtccaac
atgcaaccgaaaaacgagcgtctattcaaatacctccatcaaacagctccacgcgatttc
gagttgatcatccatgacggcgacaagctgaaaaatcgtatcaaggaactcggcgagagt
gttgagtgccttgaagtggagttggaaactagaagaagcacggaaactggactggaagcc
aaacttgctgaaatgacagtttcacataagaaggatattgaagagacgcaagcggaatgc
attaaaaggatgtctgtggagtttgaactcatgacggatagcatgtcgagacagagcaaa
gagcttattgagagcaaggaccgtgaaattgaggaactgaaggccaaactagaaaaacag
acgctgtctcatgagaaagctcttcgcaacgacccctacacggaagaatacaaacggaac
ttgactgcagagattcgtgcagaactagagaaggagttcaaacaacgtatcgaaatcatc
accaaagctgttgaatgcaagaaagatgaagcgtttgcccggcaggaaaagactttggaa
atcgagaatcgtgttctgtcgtctgaaaacgaagtcaaatccaagaaactcgaggcaatg
aactgtgagaaggaacaacttgaatcgctgattcgccagatgccagatggagaaataatt
ttggaagaattcaacgctttgaaagagagtcaaccatccgtgcatatcaaagacaaattt
gctgctattagatccaaaatggatagaagtacggactccagatgcctcgacaacaacaaa
gtccttcttatcgacaacattctgaagattcataagcttcaacaactcgtcgatgaaaga
ttgaagtataaagaggttatcaagagtcaaccaggtggtgaacaagttttgcaatgcttg
gaatctagtaccccatccgtcgcagtcgatatggaaacattctggaaagagctcacgtca
tattctggagcattcgacgaggcaggccggaaaatcactaaaattcatgaattggagatg
gaagcagtgtggcttcaagctctcgtccgtgcgaatccaagtggtcccaacattagagac
atctcagccgagttgcacaaagaaaaccatcagaaggatgtcgaaactgttacatctata
tctatgatggatatcttcatggatcatgatagagaggaaatcaaaaaactcgctcgtaca
atgcaaatgtggatgaatgcttatgtgaccagtcttcgttctggaggaacatatgcaatt
gaggattctccaaaaatcaaggagtgtgctgctaagtacaaatcacatatcatgaaaaac
tcctcctaccacggtatggaagaaagcttcttccaaccaatggctgccagcaccatccaa
cacaaaccagcacaagaggatctctcttttgaagtagagcgatgcagtcagaatactatg
tccactcaaactcgtctttgtcttcctgccatgaatcttttggtttctgtacaagatatc
aaagttggctcagctgttctcgtgatctggcatcaagcacataacgcttatgtaatcttc
tgctccagcccacatcgctttttcgtgaaggagtcttcaatccgtcgccttggcatcaac
actcaagatcccactactcgacgcaactggattattgcaagagttgtccgttctgatagc
tgttccatcaagaaaccaattaatcggtacaacctctccgtgggaaccatcgtccgccgt
gttgaagttgaaactgtcagtatggattttgagggggacttccagaaaatatcaattgcc
tga
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integrated database retrieval system