Caenorhabditis remanei (nematode): GCK72_024777
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Entry
GCK72_024777 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crq03000
]
GCK72_024777
Transcription factors [BR:
crq03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
GCK72_024777
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
9825719
NCBI-ProteinID:
XP_003118339
UniProt:
A0A6A5G059
E3LCV8
LinkDB
All DBs
Position
X:complement(13987807..13989309)
Genome browser
AA seq
282 aa
AA seq
DB search
MMMDPDLSKMQDYSNWAFGFSMPPTSSTNLHQQPMPDDMSNGPDSPDSTGKDGKKNDDRV
KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGTEWKMLSEQDKRPFIDEAKRLRAIH
MKEHPDYKYRPRRKTKSINKKNGAPIPFGNIDTKAPAYPAIPNNWNTTNQYIDQFRFGPY
YQSSAVMDHFTLANPVHSVPNDNSSPSQYQPSPLSTNFTSGSYLTPKSESSPVGSDSTVG
TIDSSQFRYYDHTKDSMMYPYSLELAHAQNIQNALSQSHVTS
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggatccggatttaagcaaaatgcaagactactcgaattgggcgttcggattc
tcgatgccacccacatcttcaacaaatcttcatcaacaaccaatgccagatgatatgtcc
aatggaccagacagtccggactccacaggcaaagatggaaagaagaatgatgatagagtg
aaacggccaatgaacgctttcatggtatggagcagaggacaacggcggaagatggctcag
gaaaacccaaaaatgcacaactcggaaatcagtaaacgtcttggaacagaatggaaaatg
ctcagtgaacaggataaacggccattcattgatgaagcaaaacgactacgcgcgattcac
atgaaggagcacccagactacaagtacagaccgagaaggaagacaaagtctatcaacaag
aaaaacggagcgcctatcccatttggaaatattgacacaaaagcaccagcttatccagcc
attccaaacaactggaacacaacgaaccaatacattgatcagttccgtttcggcccatac
taccagtcatcagctgtaatggaccatttcactctggcaaatccagtccactcagtgcct
aacgacaactcatcaccgtctcaataccagccatctccactcagcacgaatttcactagt
ggcagctacttgactccaaaatctgaaagttcgccggttggaagtgattcgacagttggc
actatcgattccagtcagttccgttactacgaccacacaaaggactcaatgatgtacccg
tacagtcttgagttggctcatgctcaaaacattcaaaatgctctttctcagtctcatgtc
acatcttaa
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