Caenorhabditis remanei (nematode): GCK72_024806
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Entry
GCK72_024806 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crq04131
]
GCK72_024806
Membrane trafficking [BR:
crq04131
]
Protein recycling
Others
EARP complex
GCK72_024806
Endosome - Golgi transport
Tethering complex
GARP complex
GCK72_024806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
Exonuc_VII_L
DUF4795
Imm30
Motif
Other DBs
NCBI-GeneID:
9824066
NCBI-ProteinID:
XP_053579626
UniProt:
A0A6A5G1C2
LinkDB
All DBs
Position
X:14104428..14107576
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AA seq
658 aa
AA seq
DB search
MSFSNKDCHDVSTRLSEAHRYAVQQCLDNSEQLAHLHNQLVHCDNVFERLQKTLYSFQDS
LGSIGQDMKHLQMQSHHLHQELENRQKVRVELSQFVDDIAVSQTMMKTINEVDANERGFL
EALHELHHKITLIIQRGNGDAVAVNDTMPILEGLKLKATVKVRDWLLAKMFQFRKPLSNY
QVFQHQLLKCRFFYEFLLHHDLISAKELQDEYIDTISKMFFTYFKAYATRLFKLAMKDVA
TKDDTLGNIDSAKPQGLSSLFSSKQHVVRNKATVFSIGQRHNILGDDFFGALIVPHAATQ
NQVAYQFEALFRSIQLAFVDHYSHEYLFITDFFLVNNEEAVELHNKAMARAMSVVLKSCE
EQIALSWDAISLHLCICLSDKFIDVLAEREVPECTDYWNTVSSLLWARLNLVMNTHYESV
KSVDLKKLMHSGSLDARPHFIVRRYAELTSAHLMIAKTSGKEIGDKMEAVLENSEDSIEQ
LLTRMSAMQQSQKNKHVFLINNFDLILSIIDDEESKHSKIYAIVHELEQKSIDDFVEEML
EPHIGYMIKFVNECESLLSQGHTQLLVRYNDKVGTVVANFNAKWRPAVDSINAECIQLFT
NFSLGTNILQTIFTKYVLYINRFTKILAHDVFVKNPVCTQLVNVHQVMLEIKRFKPAY
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtctttctccaacaaagactgccatgatgtaagtacgcgactctcggaggctcatcga
tacgccgttcaacaatgtctcgacaattcggagcaactggctcatctacacaaccaactt
gttcattgtgacaacgtttttgagcgccttcaaaagacattgtacagtttccaagacagt
ctcgggtctattggacaggatatgaaacatttgcaaatgcaatctcatcatcttcatcag
gaacttgaaaaccgccagaaggtccgagtggagttgagtcagttcgttgacgatatcgct
gtctcgcagacaatgatgaagacgataaatgaggttgatgcgaatgagagaggattcttg
gaagcacttcacgagttgcatcacaagataacacttattatccagagaggaaacggagat
gcagtggctgtgaacgatacaatgccgattctggaggggttgaagttgaaggctactgtc
aaggtccgtgactggcttctcgcaaaaatgttccaattccgaaaaccactctccaactac
caagtattccaacatcaactgctcaaatgtcgttttttctacgaatttctcctccaccat
gatttgatttctgccaaagaactgcaagacgagtacatcgacaccatcagcaaaatgttc
ttcacatatttcaaagcgtacgcgactcgtttattcaagctggcgatgaaggacgtcgcc
accaaagacgacacactgggaaatattgattctgctaagccgcagggcttaagctctctc
ttttcctctaagcaacacgtcgtccggaataaagccactgtcttctcaattggacaacga
cacaacatcctcggtgatgacttttttggtgctctcattgtcccacatgctgctacacag
aatcaagttgcgtatcaattcgaagctttattccgatcgattcaattagcgtttgtcgat
cactacagtcatgagtacctcttcatcactgatttcttcttggtcaacaacgaagaagct
gtggagcttcataataaggctatggctcgagcgatgtcagtcgtgttgaaaagctgcgag
gagcaaattgcgttgagttgggacgccattagtctccacctctgtatctgcctgagcgac
aagttcattgatgtccttgcagagcgtgaagttccagagtgcaccgattactggaatacg
gttagcagtctgctctgggctcgtctcaacttggtcatgaacacccattacgaaagtgtg
aagtcagtcgacctaaagaagctgatgcacagtggatcgctagacgccagaccgcatttc
attgttcgtcgatacgccgagttgactagtgctcatcttatgattgcaaaaacaagcggg
aaggagattggtgacaagatggaagctgtgctagagaacagtgaggactcgatcgaacaa
cttctcactagaatgtcggcaatgcagcagtcacaaaagaataagcacgtgttcttgatc
aacaactttgacctgattctgtcgattattgatgatgaagagagcaagcatagtaagata
tacgcaattgtgcacgaattggagcagaaaagtatcgatgactttgtggaagagatgcta
gaaccacatattggatatatgatcaagtttgtgaatgagtgcgagtcgctgctttctcaa
ggacacacccagctgcttgtacgttataatgataaagtgggaacagtggtggcaaacttc
aacgcaaagtggcggcctgctgtggatagtatcaatgctgaatgcattcaacttttcacc
aactttagtctcggaaccaatattcttcagacaatcttcacaaaatatgttctatacatc
aatcgattcaccaaaattctagctcacgacgtttttgtcaagaacccagtctgcacacaa
ctagtcaatgtgcaccaagtgatgcttgagatcaaacgtttcaaaccagcatattaa
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