Caenorhabditis remanei (nematode): GCK72_024958
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Entry
GCK72_024958 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GCK72_024958
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crq02000
]
GCK72_024958
04147 Exosome [BR:
crq04147
]
GCK72_024958
04090 CD molecules [BR:
crq04090
]
GCK72_024958
Enzymes [BR:
crq01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
GCK72_024958
Transporters [BR:
crq02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
GCK72_024958
Exosome [BR:
crq04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
GCK72_024958
CD molecules [BR:
crq04090
]
Proteins
GCK72_024958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA
AAA_30
AAA_16
RsgA_GTPase
AAA_29
DUF815
SRP54
AAA_24
Zeta_toxin
AAA_28
DEAD
DUF87
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
9826082
NCBI-ProteinID:
XP_053579702
UniProt:
A0A6A5G159
LinkDB
All DBs
Position
X:complement(14908208..14912941)
Genome browser
AA seq
1318 aa
AA seq
DB search
MRWPKKKNGIEPFNEISNANGKKKDMTVDLSKEDDGSVDSDEEPKIVYEPSRVEKFINYM
LCRGDLASRELSVKPVTLLGLFRYAERKEVALLTFGVFLSILSGIAQPALGIIAGGITNS
LLVYNTTSDEFYDSAMVNVWMFGGIGLIVLVVNFVQYMCFQYCCIRITSKMKQEYIRSIL
RQNAGWFDKNHSGTLTTKLHDNMERIHEGIGDKLGVLIRGMVMFVTGIIVSMFYEWRLAL
MMLGIGPLCCVCMSLMSRSMSSFTSKELAGVGKAGSIAEESLMGVRTVQAFNGQEEMVEK
YTAELGKGKSYAVQKGLWGGVFGGIFLLFLFTYFGGGIYYGGQLLRWKIIESPGDVFIVV
ISMLIGAYFLGLISPHLMVLLNARVAAATIYEIIDRTPDIDAYSSEGQKIAKIVGKVVFE
NVHFRYPTRKKVKVLNGLNLTVEPGTSVALVGHSGCGKSTSVGLLTRLYEQESGKVMIDG
HDVRGLNIDWLRKVVGIVQQEPILFNDTIHNNLLIGNPEATRDDMVRVAKMANAHDFILK
MPKGYDTVIGDGGVQLSGGQKQRVAIARTLIRDPKVLLLDEATSALDAQSESVVQSALNN
AAKGRTTIMIAHRLSTIREADNIVFFENGVIVESGNHEELVALGGRYASLVKAQQFKETD
EIFDDDEIEDDMTKIIDKQSLLSSRQVSFHRSCESLASADHEIGYASTFNTFTLKTAQDA
IENEDFAEEVQRVMEEDGVITSGYMDIFKNAQGNYWYLSIGTVFAIMRGSELALLAILFG
YVFEAFEKPDDEMTSALGIVFILYGALGLYVFITQIISGTLFTIVAENLGLKFRVQSFKN
LLYQDASFFDNPAHAPGKLITRLATDAPNVKAIVDTRMLQVIYSMTSITINLIVGFTCCW
QIAIVGSIMIALFGAMMTSLAYRIARENLRQIKKDEAGKIAIEIIENVKTIQLLTSTQRF
LDHYKESQLVQHTSEMKKSYVQSVNNAVSQTFMYFAMFVCYGVGTPLMYHSIVEPNGAFR
AINSMMMGSVAVMHSSHNFPEFVKAKTAAGMLFKLIYRKPKTGDLMEGNQTEIRGNVLFE
AVKFSYPQRPMHPVMTDLHFSAHSGQTVALVGPSGTGKSTCIAMLERFYDVSGGALRIDG
QDIRSLSLHHLRTQMALVGQEPRLFAGTIKDNVCFGLKDVPIEKVNQALELANATRFLSN
LPSGIETEVGEKGSQLSGGQKQRIAIARALVRDPKILLLDEATSALDSESERAVQEALDR
AREGRTCITIAHRLSSIQNSDLIVYIDQGKVQEAGNHAHLMSLRGKYYDLIKKQDLTS
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atgaggtggcccaagaagaagaatgggattgagccatttaatgagatttctaatgcgaac
gggaagaagaaagatatgactgtggatctatcgaaagaagatgacggttcggttgattcc
gatgaggagccgaagattgtgtacgaaccgtctagagtggagaagttcatcaattacatg
ctatgtagaggtgacttggcatccagagagctttctgtgaagccagttactctattggga
ttgtttcgatacgccgagagaaaagaagttgcgctccttactttcggtgtttttctatcc
atcctatctggtatcgctcaacctgctcttggaattattgctggcgggatcacaaactct
cttctagtttacaacactaccagtgatgaattctatgatagtgcaatggtcaatgtatgg
atgttcggagggattggacttatcgtgcttgtggtgaattttgttcagtacatgtgcttc
caatattgttgcattcgtataacctccaaaatgaagcaagagtacatccgatctatcctt
cgtcaaaacgctggctggtttgataaaaatcattctggaaccctgactacgaaactacat
gataatatggaacgtatccatgaaggaatcggagataagctgggagtcttgatccgtgga
atggtgatgtttgtgacgggaatcatagtttccatgttctatgagtggcgcctggcactc
atgatgctgggaatcggacctttgtgctgtgtctgcatgtcgttgatgtcaagatccatg
tcatcattcacatcgaaagaattagcgggagttggaaaagcaggaagtattgcggaagag
tcattaatgggagttagaactgtgcaagcattcaatggacaagaggagatggttgaaaaa
tacactgcggagctgggaaagggaaagtcatatgccgtccagaaaggattgtggggtgga
gtctttggaggtatcttccttctattcctcttcacttatttcggcggtggaatttactac
ggtggtcaacttcttcgttggaaaattatcgagagccctggtgatgttttcattgttgtg
atttccatgctcattggtgcctacttcctcggtctcatttccccacacttgatggttctt
ttgaacgccagagttgccgctgcaacgatttatgagattattgacaggactcctgatatt
gatgcctactcgtcggaaggtcagaagatcgcgaaaatcgtgggaaaagttgtgtttgag
aatgtacacttccggtacccaactaggaagaaggttaaggttttgaacggattgaacctt
actgttgaacctggaacgtcggttgcactggttggacactctggatgtggaaagtctact
tccgtcggattgttgacaagactatatgagcaagaaagtggaaaggttatgattgatgga
catgacgtcagaggactgaatattgactggctgagaaaagttgttggaattgtccagcaa
gagccaattcttttcaatgacactattcacaataatctactgattggaaacccggaagcc
actagagatgacatggttagagtagccaaaatggcaaatgctcatgatttcattttaaaa
atgccaaaaggctacgacacagttattggtgatgggggagttcaactatctggtggacag
aaacaacgtgttgctattgcgagaacccttattcgtgatccaaaggtgttacttctggat
gaggcgacatcagctttggatgctcagagtgaaagtgtggtacaatctgctctcaataat
gctgccaaggggagaactactattatgattgctcacagactctcaactatccgtgaggca
gacaatattgtgttttttgagaacggagtcattgtggaaagtggaaatcacgaggaatta
gttgctcttggaggtagatatgcaagtcttgtaaaagctcagcagttcaaggaaacagat
gaaatctttgacgatgatgaaatagaagacgacatgacaaagataatagacaagcaatca
cttctatcttcgagacaagtaagcttccatcgatcatgtgaatcattagctagtgccgac
catgaaatcggatacgccagtacattcaacacattcacgctcaaaactgcacaagatgca
atagagaatgaagactttgctgaggaagttcagcgagttatggaagaagacggtgttatc
acttctggctacatggacatcttcaaaaatgcgcaaggaaactactggtacttatcaatc
ggaacggtttttgctattatgagaggatctgagttagctcttctagctatactgttcggt
tacgtgtttgaagcatttgagaaaccagatgatgagatgacaagtgctcttggtattgta
tttatcctctatggggcactaggactgtacgtgttcattacacagatcattagtggtacc
ctattcacaattgtcgctgaaaaccttggcctcaagttccgcgtccaatcatttaaaaat
ctcctctatcaagacgcatctttctttgataaccctgctcatgctcctggaaaactgatt
actagacttgcaactgatgctccaaatgtgaaagctatagtagacaccagaatgcttcaa
gtcatttattccatgacttccattactatcaacctgattgttggttttacttgctgctgg
cagattgcaattgttggctctattatgatagcgttgttcggtgcaatgatgactagtttg
gcatatagaatcgctcgagagaacctgaggcaaatcaagaaagatgaagctggcaagatt
gctatcgaaataattgaaaatgtgaaaacaatccagctgctcaccagcactcaacgtttc
ctggatcattacaaagaatcccaattggtacagcacaccagtgaaatgaagaagtcctac
gtccaatctgtgaacaatgcggtttctcaaacttttatgtacttcgcaatgtttgtatgc
tatggggtcggaactccactcatgtatcacagcattgttgagccaaatggcgcttttcga
gcaattaactcaatgatgatgggatctgtcgctgtcatgcactcttcccacaacttccca
gagttcgtcaaggcaaaaaccgcagctggtatgctcttcaaattgatctaccgcaaacca
aagactggagatctcatggaaggcaaccagacagagatccgtgggaatgttttgttcgaa
gcagtcaagttttcttatccacaaagaccaatgcacccggtgatgactgatctgcatttc
tctgctcatagtggacagacagttgcattggtgggaccgtcgggaactggaaaaagtact
tgtattgcaatgttggaacggttttatgatgtttctggtggtgctttgagaattgatgga
caagatatcagaagtctttctcttcatcatctcagaacacaaatggctttagtcgggcag
gaaccaagattgtttgcaggaactattaaagataatgtctgctttggattgaaggatgtg
ccaattgaaaaagtgaaccaagctttagaactagcgaacgctactcgattcttgtctaat
cttccatctggaattgaaactgaagttggagagaaaggatctcaattatctggtggtcag
aaacaaagaatcgccattgcgagagctttagtcagagatccaaaaattttgctacttgat
gaagccacgtctgctttggattctgaatctgaaagggcagtacaagaagcattggatcgt
gctcgtgaaggacgtacctgcatcacaattgctcatcgtctgtcttctattcaaaactcg
gacctcatcgtttacattgaccaaggaaaagttcaggaagctggaaatcatgctcatcta
atgtcactcagaggaaaatactatgacttgatcaaaaagcaagatttgacatcatga
DBGET
integrated database retrieval system
