Caenorhabditis remanei (nematode): GCK72_025230
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Entry
GCK72_025230 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K18585
intermediate filament protein if
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
crq04812
]
GCK72_025230
Cytoskeleton proteins [BR:
crq04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type V: Nuclear lamins
GCK72_025230
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
LTD
Fez1
DUF1664
FKBP15
Motif
Other DBs
NCBI-GeneID:
9822732
NCBI-ProteinID:
XP_053579812
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Position
X
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AA seq
578 aa
AA seq
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MSKPIKPLRIVHNPVLARIIESGATNLPTGVTASGQLSILGANAAAGIRDNRDREKREIA
ELNNRLARYIEKVRFLEAQNRVLESDIGLFRQAAHIHSGKITVYYEAEKTSLVTLVREHD
AKVSSAKQNIRKLEPEIATARKNWEMSLEHRQTVRSEKRSQMEKLSHIEAETAFVKRIIN
DCEEEKGHIKSEISRLRGEIKRVLAQRDKERSGFARSQSAAQDLLKKLNGTISQHEIAIR
EEINKARRDSTDKNRDYFHRELNLAMKEIRDQFESNTKKTRKTWDEWYKKKITDIKKTSE
RYTLTQTQAREEILRIRSFLNELRVKISDADTFNQQLAKRIEEMKYREEEDLRMFEHSLN
EKQYATERMMDECAKLSVEVERLVENQITLRNEIAYYRKLMESAEHIRTTHQSNFVIDTP
SPLMRTTSYHSHGSAFTLNVRDTQDKIVHHDNYDISNLSSINSQQFRSYSKGDVKIMEHK
DESIVIENADNYKSKDLSNWKIHHYVDGALVGTFIFPIATHIHPRDKITIHSLQSSNLLD
DLVAHQIYSFDFSKNTKTVLVDDADEEVGWYAHVAYSH
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaccaatcaagccgcttcgcatagttcacaaccctgtcttggccagaattatt
gaaagtggagcgacgaatctgcctactggagtaacagccagtggacaactttcaatatta
ggtgccaatgccgctgcaggtatccgtgacaatcgagaccgcgagaaaagagagatagct
gagctgaataaccgactggcccgttatattgaaaaagtccgattcttagaagctcaaaat
agagttctcgaaagtgatattgggttattccgccaggcggctcatatacattctggcaaa
attactgtgtactatgaggctgagaaaacttctttggtaacattagttcgtgaacacgat
gcgaaagtttcctccgccaagcaaaacatccgaaaattggaaccagagattgcaactgct
agaaagaactgggaaatgtctcttgaacaccgtcaaactgtgagatctgaaaagagaagt
caaatggaaaagctatcacatattgaagcagaaactgcgtttgtcaaacgtataatcaat
gactgtgaagaagaaaagggtcatatcaaatctgaaatctcgcggcttcgaggagaaatc
aaacgagtcttggctcaacgtgataaagaacgcagtggattcgcccgttctcaatcagcc
gctcaagatttgctcaagaagttgaatggaacaatcagccaacacgaaattgccatccgt
gaagaaattaacaaagccagaagagactccacagataagaatcgtgactacttccacaga
gaacttaatttggcaatgaaggaaatccgtgatcagttcgaatcgaataccaagaaaacc
cgcaaaacgtgggacgagtggtataagaagaagatcactgatattaagaagacttcggaa
agatacactctcactcagactcaagcaagagaagaaattcttcgcatccgttcgttcctc
aatgagcttcgcgtcaagatctctgatgctgatacctttaaccaacaacttgccaagaga
atcgaggagatgaaatatcgcgaggaagaagatctcagaatgttcgagcattcattgaac
gaaaagcagtacgctactgaaagaatgatggatgaatgcgcgaaactttcagtcgaagta
gaacgacttgttgaaaatcaaataaccctccgcaacgaaatcgcttattaccgcaaattg
atggaaagcgctgaacatatccgtacaactcaccaaagcaactttgtaattgacacccct
tccccacttatgcgtaccacttcttaccattcccatggttctgcattcaccttgaacgtt
agagacactcaagataaaattgttcaccatgacaactatgacatttccaacttgagttcc
attaacagccaacagttccgcagctacagtaagggagatgtcaaaattatggagcacaaa
gacgagtcaatcgtgattgaaaacgccgataattataagtcaaaggatttatcaaactgg
aagattcatcactacgtagacggagctctagttggaacatttatcttcccaattgccact
cacattcacccaagagataaaattacgattcactccttacaatcgtccaacttgctcgac
gatcttgttgcccatcaaatttacagtttcgatttctccaaaaacacaaaaactgttctt
gttgacgatgctgatgaggaagttggatggtatgcccatgtcgcgtacagccactga
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