Caenorhabditis remanei (nematode): GCK72_025655
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Entry
GCK72_025655 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crq03000
]
GCK72_025655
Transcription factors [BR:
crq03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
GCK72_025655
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
DUF6845
Motif
Other DBs
NCBI-GeneID:
9807735
NCBI-ProteinID:
XP_003106263
UniProt:
E3MC38
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All DBs
Position
X:18077574..18078311
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AA seq
212 aa
AA seq
DB search
MSDLSCLYPTLLCTETAKTSYDEDTTSVSSGLSPPGSPLDSQTSLDHVKRPMNAFMVWSR
GQRRKMAQDNPKMHNSEISKRLGAEWKQLSEQEKRPFIDEAKRLRALHMKEHPDYKYRPR
RKPKSSNLKQQPRLNIAMPALTPPALFNYSSAFDSLKTHDLSQYYSTFFQSPVLSTATYA
PYNMMAAYARQAAAVAAASQVSTTSTTTAPAT
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatctttcatgtctatatcccacactgttatgcactgaaactgccaaaacttct
tatgatgaagacaccacatctgtttcgtctgggttaagcccacctggatctccactagac
tctcagacatcactggatcatgtaaaacggccaatgaatgcatttatggtctggagtcgg
ggacaacggaggaaaatggcacaggacaacccaaaaatgcacaattctgaaattagcaaa
cgtctgggtgcagaatggaagcagttgtcagaacaagagaaacgaccgtttatagatgag
gctaaacgacttagagctctacatatgaaggaacaccccgactacaaataccgtcctcgc
aggaagccaaaatcatcaaatctaaaacagcagccccgcctcaatattgctatgccagct
ttaacgccacctgccctattcaactactcctctgcattcgattccttgaaaacccatgac
ctttctcaatactactcaacatttttccaatctccagtactatccactgctacatatgct
ccatacaatatgatggctgcgtatgcacgacaagcagcggctgtagcggctgctagtcaa
gtttcaaccacttcaaccacaactgcgcctgctacttaa
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