Caenorhabditis remanei (nematode): GCK72_025657
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Entry
GCK72_025657 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K06839
slit 2
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq04361
Axon regeneration
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09150 Organismal Systems
09158 Development and regeneration
04361 Axon regeneration
GCK72_025657
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
crq00536
]
GCK72_025657
Glycosaminoglycan binding proteins [BR:
crq00536
]
Heparan sulfate / Heparin
Axon guidance molecules
GCK72_025657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
EGF
LRR_4
LRR_5
Laminin_G_2
Laminin_G_1
LRRNT
hEGF
EGF_TEN
LRR_1
LRR_9
LRRCT
EGF_3
EGF_CA
EGF_2
Motif
Other DBs
NCBI-GeneID:
9807787
NCBI-ProteinID:
XP_003106320
UniProt:
A0A6A5G2L9
E3MC35
LinkDB
All DBs
Position
X:complement(18084618..18090891)
Genome browser
AA seq
1410 aa
AA seq
DB search
MLICFIFILLIPESATCPTECLCIDRSVSCIGQGLTDVPLGIPNDTVRLELQENEITKIG
AEDLRGLASLKVLQLMDNQLVAIHNLAFSSLGSLQKLRLTRNRIRHLPDNLFKNNLKLSH
LDLSENDLTVVTDVQLQGPEFLEILNLDKNHIFCLENNVISSWASLEVLTLNGNRLTTFE
EPSNARFRQLELFNNPWNCDCRLRWMKKWLEKQEGTNKTVCSTPLNLQGSSIQNLQDEFM
TCSGNRKRRYKKTCENAEICPLPCTCTGTTVDCRESGLTYVPTNLPPSTTEIRLEQNQIS
SIPSNSFNNLKNLTRLDLSKNVITEIFPKAFYGLQNLHTLVLYGNNITDLKSDTFEGLGS
LQLLLLNANQLTCIRRGTFDHVPKLNMLSLYDNNIRSISEVTFKNLTSLSTLHLAKNPLI
CDCNLQWLSQLNLQKNIETSGARCEQPKRLRKKKFATLPPNKFKCKGSESFITKLADSCF
IDSICPTQCDCYGTTVDCNKRGLTAIPPAIPQFTTHLLLSGNNITTVDLTSNTQLLENLE
VLDISSNLITNINDKSFDKLKKLRELRLNENKLHHFSSSVLDEKSSLEILDLSDNNIQCF
SSIFFNKTPRIKEILVLGNNLLCDCRILPLMSWLRSNSSHIIDVPPCQQFLHSDEESDRQ
RCAALPEETCSDDSNLCPPKCSCLDRVVRCSNKNLTSFPSRIPFDTTELYLDANYINEIP
AHDLNRLYYLTKLDLSHNRLISLENNTFSNLTRLSTLIISYNKLRCLQPHAFNGLNSLRI
LSLHGNDISFLPESAFMNLTSITHIAVGSNSLYCDCNLAWFSKWIKSKFIEAGIARCEYP
VSLGNQLLLTAQPYQFTCDSKVPTKLATKCDLCLNSPCKNNAICETTSSKKYTCNCTPGF
YGVHCENQIDACYGSPCLNNATCKVAQAGRFSCYCRKGFEGDYCEKNIDDCVNSKCENGG
KCMDLVNSYRCECPLEYDGKYCEDKLEYCTKKLNPCENNGKCMKTNGTYSCLCPPGFSGK
NCETNIDDCEKVNCQNGGSCVDGILSYECVCLPGYAGQYCEIPPMMDMEYQKTDACQQST
CGQGECITNANSSEFICKCYEGFSGPSCDKQTSVGFKSPGSYLALDPLTSDGNVTMTLRT
SAKTGIILYYGDDHFVSAELYDGRVKLVYYIGNFPASHMYSSVKVNDGLPHRISIRTSER
KCYLQIDNNDVQVVENSGKSDELSTKGKEMLFIGGLPEEKAENAKNRFHVKSTESFKGCI
SLITVNEEPVDLKHALQNVNTETSCSATVNFCTGIDCGNGKCVNNALSPKGYMCQCDSHY
SGEYCDEKRIKCDKQKFRRYHIENDCRSVDRIKIAECNGYCGGEQNCCTAVKTKQRKVKM
MCKNGTTKISTVHIIRQCQCEAAKSFLTRR
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgctgatttgctttatattcattctgctgatacctgaaagtgcaacttgtccgacggaa
tgtctctgcatcgacagatcggtttcttgtattggacaagggctcacagatgttccacta
ggaatcccaaatgacactgttagactagaattgcaagaaaatgagataaccaagataggc
gccgaagatcttcgagggctggctagcttaaaagttttacaactcatggacaatcaacta
gttgcaattcacaatctcgctttttcttctcttggatctcttcaaaaactacgtctcacc
agaaatcgcatccgtcacctccctgataacttgttcaagaataatttaaaattgagtcat
ttggacctgagtgaaaacgatctgacagttgtgacggatgttcaacttcaaggtccagag
ttcctcgaaattttgaatctggataaaaaccatattttttgtttggaaaacaatgtaatc
tcttcatgggcttctttggaagtgctcacactcaatggaaacagattaacaacatttgaa
gagccctccaatgctcgatttaggcaattggaactattcaataacccatggaattgtgac
tgccgattgagatggatgaaaaagtggctggagaaacaggagggaactaacaaaaccgtt
tgttcgactccattaaacctccaagggtcatcaattcaaaatctgcaagatgagttcatg
acatgttccggaaatcgaaaacggcgttacaagaagacttgtgagaacgcagaaatctgt
ccactcccgtgtacatgcactgggactactgtagattgtagagaatctggactgacctat
gttcccacgaatctaccgccatctacaactgaaatacgactcgagcaaaatcaaatttca
tcgattccatcgaactcgttcaataatttgaaaaatttgaccagattagatttgagtaaa
aacgtgatcaccgagatattcccgaaagctttctatggcctacaaaatctgcatacactt
gtgctctacgggaacaatatcactgatttgaaatcggatacttttgaaggtcttggaagt
ttacaattattactgctcaatgccaatcaactgacatgtattcggagggggacttttgat
catgttccgaaattgaacatgttatcattatatgataataatatcaggtctataagtgaa
gtcacattcaaaaatttgacaagtctgagtacattacatttggcaaagaacccgttaatc
tgtgattgtaatttgcaatggttgtcacaattgaacttacaaaagaatatcgaaacaagt
ggagcaagatgtgaacaaccgaagcgtctcaggaaaaagaagtttgcgacattaccaccg
aataagttcaaatgcaaaggttccgaatcatttatcaccaaacttgcggattcttgcttc
atcgactcaatctgcccaactcaatgcgactgctatggaactactgttgactgcaacaaa
cgaggccttactgcgatcccacctgccattcctcaattcaccactcatcttcttttatct
ggaaacaatataactaccgtcgacttgacctcaaatactcagttgctagagaatttagaa
gttctggatatctcgagtaaccttatcaccaacatcaatgacaaaagttttgataaacta
aaaaaactgagagagctgcgattgaatgaaaacaagcttcaccacttttcaagttcagtt
ctggatgaaaaatccagtttggagattttagatctctctgacaataacatccaatgtttt
tcgtcgatatttttcaacaaaacgccaagaataaaagaaatcctagttctcggcaataat
ttgctctgcgactgtcgaattctacccctcatgtcttggttgagatcaaattctagtcat
atcattgatgtcccgccatgccagcaattccttcatagtgatgaggaatcagacaggcaa
cggtgtgcagcattacccgaagaaacgtgttctgatgacagtaatctatgccctccaaag
tgttcttgcttggatcgtgttgtccgctgctccaacaagaatttgacgagttttccaagc
agaattccatttgacactactgaactctatctggatgcaaattatatcaacgaaattcca
gctcacgatttgaatcggttgtactacttgactaaactagatttgtcacataaccgactg
atctctttggagaacaacacattctcaaatctaactagactgtcgacattgataattagt
tataacaagctgcggtgcctccaaccacatgcattcaatggacttaattcccttcgcatt
ctttcattgcatggaaacgatatatcattcctccctgaatctgcattcatgaatcttacc
agcatcactcatatagcggttggaagtaattctttatactgtgactgcaacctggcttgg
ttttcaaaatggatcaagtcgaaattcatcgaagctggaatagcaagatgtgaatatcca
gttagtcttgggaaccaactcttgcttactgctcaaccataccagttcacatgcgactca
aaagtgccaaccaagctagccaccaaatgtgatctctgtctgaactctccatgcaaaaac
aacgctatctgtgaaaccaccagtagtaagaagtacacttgcaactgcacaccaggattc
tatggtgttcattgtgaaaaccaaattgatgcgtgttatgggtccccatgtctgaataat
gcgacatgtaaagtagcgcaagctggtcggttctcatgttactgcagaaaaggatttgaa
ggagactattgtgagaaaaatattgatgactgtgtgaactccaagtgcgagaatggtgga
aagtgtatggatttggtgaactcctatcgctgtgaatgccctcttgaatatgatggaaag
tattgtgaagacaaactcgagtactgtaccaaaaaactgaacccatgtgagaacaatggg
aaatgtatgaagactaatgggacttacagctgtctctgccctcctggtttctccgggaag
aactgcgagacaaatatcgacgactgtgaaaaagtgaactgtcagaatggcggaagttgt
gtggatggaatcttatcctacgagtgcgtctgtcttccgggctatgctgggcagtattgt
gagatcccaccaatgatggacatggaataccagaagactgatgcctgtcaacagtcaact
tgtgggcagggtgaatgtatcaccaatgcaaattcatctgagttcatctgcaagtgctat
gaaggtttcagtggtccaagttgtgacaaacagacctctgttggattcaagtctccaggg
tcttacctagcattagacccgctgactagtgatggaaatgtaacaatgactctgagaact
tctgccaaaaccggcataattttgtactacggtgacgatcattttgtgtctgctgaattg
tatgatggtagagtcaagctggtgtattatattggaaatttcccagcaagtcatatgtat
agttcagtgaaagttaatgacggtctcccgcacagaatttctataagaacatcagaaaga
aagtgttacctccaaattgacaacaatgatgtgcaagtggttgagaatagtggaaaatct
gatgagcttagtacaaaaggaaaagaaatgctgtttattggtggactacctgaggaaaaa
gcggagaatgcaaagaacaggttccatgtcaagagtactgaaagtttcaaaggttgcata
agtttgatcaccgtcaatgaagagcccgtcgatttgaaacatgctttgcaaaatgtgaac
acagagacaagttgttcagctacagtaaacttctgcactggaatcgactgtggaaacgga
aaatgcgtcaataacgctctatcaccaaaaggttacatgtgtcaatgcgattcacattat
tctggagagtactgtgatgaaaagaggatcaaatgtgacaagcaaaagtttagaaggtac
cacatcgaaaacgactgccgatcggttgatagaatcaagatagcagagtgcaatggctat
tgtggtggcgagcagaattgctgtaccgctgtaaaaaccaaacaaagaaaagtgaaaatg
atgtgcaaaaatgggacaacaaaaatctccacggtacacatcatccgtcagtgccaatgt
gaagcagccaagagtttcctcaccagacgatga
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integrated database retrieval system