Candidatus Carsonella ruddii (Diaphorina cf. continua): CRDco_1490
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Entry
CRDco_1490 CDS
T09287
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
crr
Candidatus Carsonella ruddii (Diaphorina cf. continua)
Pathway
crr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
crr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CRDco_1490 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crr03021
]
CRDco_1490 (rpoA)
03400 DNA repair and recombination proteins [BR:
crr03400
]
CRDco_1490 (rpoA)
Enzymes [BR:
crr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CRDco_1490 (rpoA)
Transcription machinery [BR:
crr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CRDco_1490 (rpoA)
DNA repair and recombination proteins [BR:
crr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CRDco_1490 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
ELFV_dehydrog
Motif
Other DBs
NCBI-ProteinID:
BCG49374
UniProt:
A0A7R6VZI6
LinkDB
All DBs
Position
complement(139907..140872)
Genome browser
AA seq
321 aa
AA seq
DB search
MTKNNFFFLNKISFKKISIFRNLIKIEFFNNSFIDSLGNFIRRTIFLTNYGYKISYIKFF
NVNSEYSNLKGVRENTWEIILNLNNILFKIKDEIFAYLIIKKNGPCVVKAKDIFSDKKII
ILNPNIVIANITGNVLFYIIMKCNLSSYNLNDLNFKEKFFKSKIIRLNFINSVIKNVNYF
IHKKVYNKNIKTLFFDIETNGVLEPEMCFRNCIFFIKKYFDIVFSIIGVKKKKKIEIRKR
KQFLKINPVLIRSVDNLEISIHTSNVLKRNNIYLIGDLIKQSEQSLLNLKFINKNVYLEI
IEALNNKNLPLNMKINYEIQF
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaataattttttttttttaaataaaataagttttaagaaaatttctattttt
agaaatttaataaaaattgaattctttaataattcttttatagattctttaggaaatttt
ataagaagaacaatttttttaactaattatggatataaaatttcttatataaaatttttt
aatgttaattcggaatattctaatttaaaaggggtaagagaaaatacttgggaaataatt
ttaaatttgaataatatattatttaaaattaaagatgaaatttttgcatatttaataata
aaaaaaaatggtccttgtgtggtaaaagctaaagatattttttcagataaaaaaattatt
attttaaatccaaatattgttattgctaatattaccggaaatgtgttgttttatataatt
atgaaatgtaatttaagtagttataatttaaatgatttaaattttaaagaaaaatttttt
aaatcaaaaataattagattaaattttattaattctgttattaaaaacgtaaattacttt
atacataagaaagtatataacaaaaatattaaaactttattttttgatatagaaactaat
ggagtactagaaccagaaatgtgttttcgtaattgcattttttttataaaaaaatatttt
gatattgtattttctataataggagttaaaaaaaaaaaaaaaatagaaattagaaaaaga
aaacaatttttaaaaataaatcctgttttaataagatcagtagacaatttggaaattagt
atacatacgtcaaatgttttaaaaagaaataatatttacttaataggagatttgatcaaa
caatcagaacaaagtttacttaatttgaagtttataaacaaaaatgtatatttggaaata
atagaagcattaaataataaaaatttgccattaaacatgaaaataaattatgaaatacag
ttttaa
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